Gene: AT5G19030

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G19030
  • Transcript Identifier AT5G19030.1
  • Gene Type Coding gene
  • Location Chr5 : 6357503-6359081 : negative

Gene Family Information

  • ID HOM05D001197
  • #Genes/#Species 523/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G19030.1
  • uniprot F4JZK9

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein
  • Computational description RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G20030.1); Has 18468 Blast hits to 14051 proteins in 762 species: Archae - 10; Bacteria - 1205; Metazoa - 9569; Fungi - 2141; Plants - 3708; Viruses - 0; Other Eukaryotes - 1835 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR003954 RNA recognition motif domain, eukaryote
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated