Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 0.0e+00 1640.2 974 100.0
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 1.0e-310 1070.1 982 69.0
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 8.6e-294 1013.8 1009 66.0
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 5.3e-283 978.0 984 68.3
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 3.4e-282 975.3 984 67.8
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 8.0e-231 804.7 959 58.5
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 2.3e-137 494.2 856 45.4
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 2.6e-88 331.3 1043 35.0
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 4.1e-78 297.4 1076 32.3
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 1.1e-75 289.3 951 33.6
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 3.6e-74 284.3 1014 33.1
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 1.1e-70 272.7 968 34.2
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 4.1e-70 270.8 1024 33.9
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 3.9e-68 264.2 1005 32.1
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 3.2e-62 244.6 1070 32.2
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 9.2e-62 243.0 971 33.3
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 1.9e-51 208.8 935 32.1
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 1.6e-50 205.7 832 30.2
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 3.6e-50 204.5 1003 29.4
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 1.1e-49 203.0 1119 30.9
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 4.5e-48 197.6 706 33.3
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 5.8e-48 197.2 785 34.1
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 7.6e-48 196.8 850 31.6
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 1.3e-47 196.1 1053 29.2
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 1.1e-46 193.0 1027 29.8
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 5.4e-46 190.7 534 39.3
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 2.3e-44 185.3 1090 28.0
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 4.3e-43 181.0 750 32.8
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 9.6e-43 179.9 984 30.5
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.3e-42 179.5 990 29.7
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 1.6e-42 179.1 957 29.2
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.8e-42 178.3 971 30.2
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 4.0e-41 174.5 983 29.1
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 9.0e-41 173.3 1002 30.2
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 7.6e-40 170.2 561 35.1
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 3.3e-35 154.8 949 29.2
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 5.6e-35 154.1 652 31.6
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 7.4e-35 153.7 1006 27.7
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 9.6e-35 153.3 967 28.6
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 1.3e-34 152.9 747 30.5
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 5.3e-33 147.5 548 34.7
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 6.9e-33 147.1 568 31.7
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 3.4e-32 144.8 1050 27.6
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 4.5e-32 144.4 727 29.7
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 1.7e-31 142.5 949 27.7
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 2.2e-31 142.1 760 29.6
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 1.1e-27 129.8 439 36.0
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 1.5e-27 129.4 648 31.0
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 1.9e-27 129.0 531 31.3
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 1.9e-27 129.0 674 27.7
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 2.5e-27 128.6 667 29.8
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 2.5e-27 128.6 888 25.7
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 3.3e-27 128.3 779 29.0
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 5.7e-27 127.5 731 30.1
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 5.7e-27 127.5 1053 26.9
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 3.7e-26 124.8 317 38.8
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 4.8e-26 124.4 839 27.8
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 2.4e-25 122.1 542 31.0
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 2.4e-25 122.1 620 31.3
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 6.9e-25 120.6 881 25.3
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 1.2e-24 119.8 766 27.4
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 2.6e-24 118.6 788 30.5
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 1.7e-23 115.9 726 29.9
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 2.2e-23 115.5 863 29.0
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 5.0e-23 114.4 231 42.9
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 1.4e-22 112.8 521 29.8
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 4.2e-22 111.3 937 24.8
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 5.5e-22 110.9 867 27.9
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 1.2e-21 109.8 395 37.5
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 2.1e-21 109.0 876 24.7
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 3.6e-21 108.2 309 37.9
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 1.0e-20 106.7 502 31.3
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 3.9e-20 104.8 397 30.2
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 2.5e-19 102.1 192 41.1
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 3.3e-19 101.7 666 27.8
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 5.7e-19 100.9 477 29.1
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 5.7e-19 100.9 174 55.2
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 9.7e-19 100.1 629 29.4
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 1.3e-18 99.8 718 27.2
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 1.6e-18 99.4 632 30.5
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 1.6e-18 99.4 248 35.5
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 2.2e-18 99.0 435 34.0
Cpa.g.sc28.161 Carica papaya HOM05D006920 ORTHO05D005895 2.8e-18 98.6 320 30.6
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 2.8e-18 98.6 560 31.4
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 3.7e-18 98.2 446 35.9
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 3.7e-18 98.2 463 35.9
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 8.2e-18 97.1 122 54.9
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 3.1e-17 95.1 589 31.2
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 5.3e-17 94.4 390 33.1
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 5.3e-17 94.4 390 33.1
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 5.3e-17 94.4 390 33.1
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 1.2e-16 93.2 118 59.3
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 1.5e-16 92.8 416 32.2
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 1.5e-16 92.8 104 56.7
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 2.0e-16 92.4 60 73.3
Ca_12179_v3 Cicer arietinum L. HOM05D006920 ORTHO05D005895 2.0e-16 92.4 934 23.4
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 2.0e-16 92.4 681 29.7
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 2.6e-16 92.0 954 25.6
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 5.9e-16 90.9 806 26.2
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 1.0e-15 90.1 225 47.1
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 1.3e-15 89.7 76 63.2
Aa31LG11G5940 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.7e-15 89.4 615 25.5
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 1.7e-15 89.4 60 71.7
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 3.8e-15 88.2 409 30.3
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 5.0e-15 87.8 376 31.4
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 1.1e-14 86.7 381 32.5
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 1.1e-14 86.7 877 26.9
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 2.5e-14 85.5 94 66.0
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 3.2e-14 85.1 106 42.5
CSS0014816 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 4.6e-13 81.3 409 26.4
CSS0039023 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 4.6e-13 81.3 379 28.2
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 7.9e-13 80.5 166 45.2
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 2.6e-11 75.5 371 31.0
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 3.7e-10 71.6 129 46.5
CSS0019085 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 4.1e-09 68.2 378 25.7
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 4.1e-09 68.2 100 43.0
Eucgr.C01628 Eucalyptus grandis HOM05D006920 ORTHO05D005895 3.4e-08 65.1 474 24.1
Pp3c19_22680 Physcomitrium patens HOM05D006920 ORTHO05D005895 5.9e-08 64.3 100 58.0
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 1.0e-07 63.5 58 48.3
AL52U10020 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 1.7e-07 62.8 228 37.3
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 1.7e-07 62.8 511 26.6
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 3.8e-07 61.6 100 54.0
Zm00001eb160100 Zea mays HOM05D006920 ORTHO05D005895 1.9e-06 59.3 230 37.8


User provided reference genes

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