Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib150G1491 Durio zibethinus HOM05D003544 ORTHO05D003830 3.1e-84 315.1 158 100.0
Thecc.09G317500 Theobroma cacao HOM05D003544 ORTHO05D003830 3.8e-42 175.3 123 75.6
Duzib168G0263 Durio zibethinus HOM05D003544 ORTHO05D003830 6.5e-42 174.5 123 75.6
Duzib170G0696 Durio zibethinus HOM05D003544 ORTHO05D003830 1.9e-41 172.9 123 73.2
Gohir.D03G122700 Gossypium hirsutum HOM05D003544 ORTHO05D003830 1.9e-41 172.9 123 76.4
Gorai.003G129400 Gossypium raimondii HOM05D003544 ORTHO05D003830 1.9e-41 172.9 123 76.4
Gohir.A03G044500 Gossypium hirsutum HOM05D003544 ORTHO05D003830 5.5e-41 171.4 123 75.6
COL.COLO4_18562 Corchorus olitorius HOM05D003544 ORTHO05D003830 7.2e-41 171.0 123 75.6
Gohir.A13G227000 Gossypium hirsutum HOM05D003544 ORTHO05D003830 7.2e-41 171.0 123 76.4
Gohir.D13G232300 Gossypium hirsutum HOM05D003544 ORTHO05D003830 7.2e-41 171.0 123 76.4
Gorai.013G263100 Gossypium raimondii HOM05D003544 ORTHO05D003830 7.2e-41 171.0 123 76.4
Potri.009G034700 Populus trichocarpa HOM05D003544 ORTHO05D003830 9.5e-41 170.6 123 74.8
TAR623G1685 Trochodendron aralioides HOM05D003544 ORTHO05D003830 1.6e-40 169.9 123 73.2
Cpa.g.sc1.429 Carica papaya HOM05D003544 ORTHO05D003830 2.1e-40 169.5 124 74.2
MD11G1096300 Malus domestica HOM05D003544 ORTHO05D003830 3.6e-40 168.7 124 73.4
PSO339G1680 Papaver somniferum HOM05D003544 ORTHO05D003830 3.6e-40 168.7 123 73.2
Manes.01G170400 Manihot esculenta HOM05D003544 ORTHO05D003830 6.1e-40 167.9 123 73.2
Hund16071 Selenicereus undatus HOM05D003544 ORTHO05D003830 6.1e-40 167.9 123 73.2
Ciclev10030412m.g Citrus clementina HOM05D003544 ORTHO05D003830 8.0e-40 167.5 123 73.2
COL.COLO4_15089 Corchorus olitorius HOM05D003544 ORTHO05D003830 8.0e-40 167.5 123 73.2
PSO063G3772 Papaver somniferum HOM05D003544 ORTHO05D003830 8.0e-40 167.5 123 72.4
ClCG11G006780 Citrullus lanatus HOM05D003544 ORTHO05D003830 1.0e-39 167.2 130 70.0
CsaV3_6G001260 Cucumis sativus L. HOM05D003544 ORTHO05D003830 1.0e-39 167.2 130 70.0
CiPaw.01G289700 Carya illinoinensis HOM05D003544 ORTHO05D003830 1.4e-39 166.8 123 73.2
Prupe.6G071900 Prunus persica HOM05D003544 ORTHO05D003830 1.4e-39 166.8 123 72.4
CANSAT54G2540 Cannabis sativa HOM05D003544 ORTHO05D003830 1.8e-39 166.4 123 72.4
MBI05_g29687_MAGBIO Magnolia biondii HOM05D003544 ORTHO05D003830 1.8e-39 166.4 124 73.4
Thecc.10G037000 Theobroma cacao HOM05D003544 ORTHO05D003830 1.8e-39 166.4 123 72.4
Cfa001450 Carpinus fangiana HOM05D003544 ORTHO05D003830 2.3e-39 166.0 123 73.2
EL10Ac2g04722 Beta vulgaris HOM05D003544 ORTHO05D003830 3.0e-39 165.6 123 72.4
Sabra09G0024700 Salix brachista HOM05D002577 ORTHO05D002883 3.0e-39 165.6 123 73.2
Prupe.2G238100 Prunus persica HOM05D003544 ORTHO05D003830 4.0e-39 165.2 123 73.2
GSVIVG01016511001 Vitis vinifera HOM05D003544 ORTHO05D003830 5.2e-39 164.9 123 72.4
Haze_24135 Corylus avellana HOM05D003544 ORTHO05D003830 6.8e-39 164.5 123 69.9
QL08p060246 Quercus lobata HOM05D003544 ORTHO05D003830 8.8e-39 164.1 123 72.4
QL08p060482 Quercus lobata HOM05D003544 ORTHO05D003830 8.8e-39 164.1 123 72.4
CSS0004294 Camellia sinensis var. sinensis HOM05D003544 ORTHO05D003830 1.2e-38 163.7 124 72.6
CANSAT56G1342 Cannabis sativa HOM05D003544 ORTHO05D003830 1.2e-38 163.7 123 70.7
Cfa011530 Carpinus fangiana HOM05D003544 ORTHO05D003830 1.2e-38 163.7 123 69.9
AUR62012119 Chenopodium quinoa HOM05D003544 ORTHO05D003830 1.2e-38 163.7 122 72.1
Haze_17091 Corylus avellana HOM05D003544 ORTHO05D003830 1.2e-38 163.7 139 67.6
FvH4_7g22830 Fragaria vesca HOM05D003544 ORTHO05D003830 1.2e-38 163.7 123 72.4
FAN03G2315 Fragaria x ananassa HOM05D003544 ORTHO05D003830 1.2e-38 163.7 123 72.4
FAN06G0546 Fragaria x ananassa HOM05D003544 ORTHO05D003830 1.2e-38 163.7 123 72.4
PGR119G0781 Punica granatum HOM05D003544 ORTHO05D003830 1.2e-38 163.7 123 72.4
RcHm_v2.0_Chr1g0367981 Rosa chinensis HOM05D003544 ORTHO05D003830 1.2e-38 163.7 123 72.4
AUR62040717 Chenopodium quinoa HOM05D003544 ORTHO05D003830 1.5e-38 163.3 122 72.1
arahy.Tifrunner.gnm1.ann1.2U9KWS Arachis hypogaea HOM05D003544 ORTHO05D003830 2.0e-38 162.9 143 66.4
FAN01G0392 Fragaria x ananassa HOM05D000150 ORTHO05D003830 2.0e-38 162.9 127 70.9
FAN01G0956 Fragaria x ananassa HOM05D000150 ORTHO05D003830 2.0e-38 162.9 127 70.9
QL01p030710 Quercus lobata HOM05D003544 ORTHO05D003830 2.0e-38 162.9 123 72.4
SGA_v2.0_scaffold2G01024 Striga asiatica HOM05D003544 ORTHO05D003830 2.0e-38 162.9 123 70.7
Migut.F01531 Erythranthe guttata HOM05D003544 ORTHO05D003830 2.6e-38 162.5 123 70.7
FAN10G3533 Fragaria x ananassa HOM05D003544 ORTHO05D003830 2.6e-38 162.5 123 71.5
Glyma.18G037200 Glycine max HOM05D003544 ORTHO05D003830 2.6e-38 162.5 124 71.8
VMungo1383G2117 Vigna mungo HOM05D003544 ORTHO05D003830 2.6e-38 162.5 124 71.8
arahy.Tifrunner.gnm1.ann1.95BPNM Arachis hypogaea HOM05D003544 ORTHO05D003830 3.4e-38 162.2 124 72.6
Lj6g0009635 Lotus japonicus HOM05D003544 ORTHO05D003830 3.4e-38 162.2 124 71.8
Manes.07G118000 Manihot esculenta HOM05D003544 ORTHO05D003830 3.4e-38 162.2 124 71.8
Atru.chr3.3967 Acer truncatum HOM05D003544 ORTHO05D003830 4.4e-38 161.8 123 72.4
Dinv06767 Davidia involucrata HOM05D003544 ORTHO05D003830 4.4e-38 161.8 123 72.4
Sed0003735 Sechium edule HOM05D003544 ORTHO05D003830 4.4e-38 161.8 124 71.8
Sc10g0001720 Simmondsia chinensis HOM05D003544 ORTHO05D003830 4.4e-38 161.8 124 71.8
vmacro10222 Vaccinium macrocarpon HOM05D003544 ORTHO05D003830 4.4e-38 161.8 123 69.9
Atru.chr12.416 Acer truncatum HOM05D003544 ORTHO05D003830 5.7e-38 161.4 123 70.7
CiPaw.13G090700 Carya illinoinensis HOM05D003544 ORTHO05D003830 5.7e-38 161.4 124 70.2
Ca_08172_v3 Cicer arietinum L. HOM05D003544 ORTHO05D003830 5.7e-38 161.4 124 71.8
Medtr3g067995 Medicago truncatula HOM05D003544 ORTHO05D003830 5.7e-38 161.4 124 71.8
Potri.010G201500 Populus trichocarpa HOM05D003544 ORTHO05D003830 5.7e-38 161.4 124 71.8
GSVIVG01024921001 Vitis vinifera HOM05D003544 ORTHO05D003830 5.7e-38 161.4 123 71.5
Glyma.11G220200 Glycine max HOM05D003544 ORTHO05D003830 7.5e-38 161.0 124 71.0
Nn2g11170 Nelumbo nucifera HOM05D003544 ORTHO05D003830 9.8e-38 160.6 126 69.8
Duzib114G0911 Durio zibethinus HOM05D003544 ORTHO05D003830 1.3e-37 160.2 123 69.9
Phvul.001G233500 Phaseolus vulgaris HOM05D003544 ORTHO05D003830 1.3e-37 160.2 124 70.2
Psat5g123600 Pisum sativum HOM05D003544 ORTHO05D003830 1.3e-37 160.2 124 71.8
SGA_v2.0_scaffold221G42690 Striga asiatica HOM05D003544 ORTHO05D003830 1.3e-37 160.2 123 70.7
MD07G1201500 Malus domestica HOM05D003544 ORTHO05D003830 1.7e-37 159.8 123 70.7
Rhsim09G0167200 Rhododendron simsii HOM05D003544 ORTHO05D003830 1.7e-37 159.8 123 69.9
MSTRG.8261 Avicennia marina HOM05D003544 ORTHO05D003830 2.2e-37 159.5 123 70.7
Cpa.g.sc81.110 Carica papaya HOM05D003544 ORTHO05D003830 2.8e-37 159.1 123 69.9
Dinv34268 Davidia involucrata HOM05D003544 ORTHO05D003830 2.8e-37 159.1 123 69.1
Oeu017652.1 Olea europaea HOM05D003544 ORTHO05D003830 2.8e-37 159.1 123 69.9
vmacro03041 Vaccinium macrocarpon HOM05D003544 ORTHO05D003830 2.8e-37 159.1 123 69.1
AL5G36700 Arabidopsis lyrata HOM05D003544 ORTHO05D003830 3.7e-37 158.7 123 69.1
Eucgr.G02946 Eucalyptus grandis HOM05D003544 ORTHO05D003830 3.7e-37 158.7 124 71.0
HanXRQChr10g0312851 Helianthus annuus HOM05D003544 ORTHO05D003830 3.7e-37 158.7 123 70.7
MD01G1136500 Malus domestica HOM05D003544 ORTHO05D003830 3.7e-37 158.7 123 70.7
BcaC07g39879 Brassica carinata HOM05D003544 ORTHO05D003830 4.9e-37 158.3 123 68.3
A09p48540 Brassica napus HOM05D003544 ORTHO05D003830 4.9e-37 158.3 123 68.3
C08p30840 Brassica napus HOM05D003544 ORTHO05D003830 4.9e-37 158.3 123 68.3
BolC8t50710H Brassica oleracea HOM05D003544 ORTHO05D003830 4.9e-37 158.3 123 68.3
Cc02_g07580 Coffea canephora HOM05D003544 ORTHO05D003830 4.9e-37 158.3 122 69.7
Duzib106G1967 Durio zibethinus HOM05D003544 ORTHO05D003830 4.9e-37 158.3 123 70.7
Lsat_1_v5_gn_2_118280 Lactuca sativa HOM05D003544 ORTHO05D003830 4.9e-37 158.3 123 69.9
Lj8A82T51 Lonicera japonica HOM05D003544 ORTHO05D003830 4.9e-37 158.3 123 70.7
Sp5g06950 Schrenkiella parvula HOM05D003544 ORTHO05D003830 4.9e-37 158.3 123 68.3
ECA232G4890 Erigeron canadensis HOM05D003544 ORTHO05D003830 8.3e-37 157.5 123 69.1
Thhalv10010626m.g Eutrema salsugineum HOM05D003544 ORTHO05D003830 8.3e-37 157.5 123 68.3
Peaxi162Scf00164g01220 Petunia axillaris HOM05D003544 ORTHO05D003830 8.3e-37 157.5 123 69.9
AT3G55530 Arabidopsis thaliana HOM05D003544 ORTHO05D003830 1.1e-36 157.1 124 68.5
Carub.0005s2226 Capsella rubella HOM05D003544 ORTHO05D003830 1.1e-36 157.1 123 68.3
Nitab4.5_0000647g0150 Nicotiana tabacum HOM05D003544 ORTHO05D003830 1.4e-36 156.8 123 69.9
Nitab4.5_0006365g0020 Nicotiana tabacum HOM05D003544 ORTHO05D003830 1.4e-36 156.8 123 69.9
Sed0018949 Sechium edule HOM05D003544 ORTHO05D003830 1.4e-36 156.8 124 70.2
THA.LOC104810038 Tarenaya hassleriana HOM05D003544 ORTHO05D003830 2.4e-36 156.0 123 69.1
Aqoxy1G00897 Aquilegia oxysepala HOM05D003544 ORTHO05D003830 3.1e-36 155.6 123 67.5
Sopen05g031560 Solanum pennellii HOM05D003544 ORTHO05D003830 7.0e-36 154.5 123 69.1
BcaB01g00085 Brassica carinata HOM05D003544 ORTHO05D003830 9.2e-36 154.1 123 66.7
ATR0559G280 Amborella trichopoda HOM05D003544 ORTHO05D003830 1.6e-35 153.3 124 68.5
TWI15G1030 Tripterygium wilfordii HOM05D003544 ORTHO05D003830 3.5e-35 152.1 123 66.7
Lj1C940T8 Lonicera japonica HOM05D003544 ORTHO05D003830 5.9e-35 151.4 124 67.7
Os03g0272300 Oryza sativa ssp. japonica HOM05D003544 ORTHO05D003830 5.9e-35 151.4 125 68.0
Ca_20624_v3 Cicer arietinum L. HOM05D003544 ORTHO05D003830 7.7e-35 151.0 123 65.0
Solyc05g053040.3 Solanum lycopersicum HOM05D003544 ORTHO05D003830 7.7e-35 151.0 124 69.4
AUR62001751 Chenopodium quinoa HOM05D003544 ORTHO05D003830 1.0e-34 150.6 124 68.5
VMungo1127G1202 Vigna mungo HOM05D003544 ORTHO05D003830 1.0e-34 150.6 123 65.9
PGR142G2124 Punica granatum HOM05D003544 ORTHO05D003830 1.3e-34 150.2 123 66.7
Ciclev10032379m.g Citrus clementina HOM05D003544 ORTHO05D003830 1.7e-34 149.8 123 68.3
MSTRG.276 Avicennia marina HOM05D003544 ORTHO05D003830 2.3e-34 149.4 126 67.5
Phvul.011G062500 Phaseolus vulgaris HOM05D003544 ORTHO05D003830 2.9e-34 149.1 123 65.0
Hma1.2p1_1480F.1_g286053 Hydrangea macrophylla HOM05D003544 ORTHO05D003830 5.0e-34 148.3 122 63.9
TWI31G1295 Tripterygium wilfordii HOM05D003544 ORTHO05D003830 5.0e-34 148.3 124 66.1
CSS0032889 Camellia sinensis var. sinensis HOM05D003544 ORTHO05D003830 6.6e-34 147.9 123 64.2
Glyma.11G137400 Glycine max HOM05D003544 ORTHO05D003830 8.6e-34 147.5 123 65.0
Rhsim13G0078200 Rhododendron simsii HOM05D000082 ORTHO05D003830 8.6e-34 147.5 97 77.3
PGSC0003DMG400027142 Solanum tuberosum HOM05D000478 ORTHO05D003830 8.6e-34 147.5 101 75.2
HPP92_006644 Vanilla planifolia HOM05D003544 ORTHO05D003830 8.6e-34 147.5 136 63.2
Ca_26141_v3 Cicer arietinum L. HOM05D001813 ORTHO05D003830 1.1e-33 147.1 101 76.2
Lalb_Chr15g0084651 Lupinus albus HOM05D003544 ORTHO05D003830 1.5e-33 146.7 124 66.9
EL10Ac7g16053 Beta vulgaris HOM05D003544 ORTHO05D003830 1.9e-33 146.4 124 65.3
Gorai.011G266800 Gossypium raimondii HOM05D003544 ORTHO05D003830 3.3e-33 145.6 123 64.2
Lj1A148T52 Lonicera japonica HOM05D003544 ORTHO05D003830 3.3e-33 145.6 122 63.9
CARHR165590 Cardamine hirsuta HOM05D003544 ORTHO05D003830 5.6e-33 144.8 123 66.7
SHI22634 Sapria himalayana HOM05D003544 ORTHO05D003830 9.5e-33 144.1 127 62.2
Gohir.D10G233200 Gossypium hirsutum HOM05D003544 ORTHO05D003830 1.2e-32 143.7 123 63.4
Aa31LG10G10560 Aethionema arabicum HOM05D003544 ORTHO05D003830 2.1e-32 142.9 125 64.0
AUR62020020 Chenopodium quinoa HOM05D002577 ORTHO05D003830 2.1e-32 142.9 124 66.1
Lj3g0017508 Lotus japonicus HOM05D003544 ORTHO05D003830 2.8e-32 142.5 122 63.1
Psat7g210640 Pisum sativum HOM05D003544 ORTHO05D003830 3.6e-32 142.1 123 62.6
Gohir.A10G221000 Gossypium hirsutum HOM05D003544 ORTHO05D003830 4.7e-32 141.7 123 62.6
unitig_0.g1019 Utricularia gibba HOM05D003544 ORTHO05D003830 4.7e-32 141.7 125 64.0
Hma1.2p1_0757F.1_g213320 Hydrangea macrophylla HOM05D003544 ORTHO05D003830 6.1e-32 141.4 137 59.9
Actinidia08535 Actinidia chinensis HOM05D003544 ORTHO05D003830 8.0e-32 141.0 127 62.2
TPR.G23586 Trifolium pratense HOM05D003544 ORTHO05D003830 8.0e-32 141.0 123 61.0
Ah.15g098530 Amaranthus hybridus HOM05D003544 ORTHO05D003830 1.0e-31 140.6 125 65.6
CDE02G1059 Ceratophyllum demersum HOM05D003544 ORTHO05D003830 1.0e-31 140.6 127 62.2
Zm00001eb012200 Zea mays HOM05D003544 ORTHO05D003830 2.3e-31 139.4 125 63.2
Ah.16g102480 Amaranthus hybridus HOM05D003544 ORTHO05D003392 3.0e-31 139.0 130 63.1
PSO339G2861 Papaver somniferum HOM05D003544 ORTHO05D003830 1.7e-29 133.3 125 60.8
arahy.Tifrunner.gnm1.ann1.80FYU6 Arachis hypogaea HOM05D003544 ORTHO05D003830 3.7e-29 132.1 123 57.7
Glyma.12G060800 Glycine max HOM05D003544 ORTHO05D003830 3.7e-29 132.1 150 52.0
Hund04929 Selenicereus undatus HOM05D003544 ORTHO05D003830 1.4e-28 130.2 124 63.7
TPR.G15819 Trifolium pratense HOM05D003544 ORTHO05D003830 1.6e-27 126.7 129 58.1
Lalb_Chr24g0394051 Lupinus albus HOM05D003544 ORTHO05D003830 4.6e-27 125.2 122 56.6
Eucgr.J02038 Eucalyptus grandis HOM05D003544 ORTHO05D003830 3.0e-26 122.5 123 58.5
arahy.Tifrunner.gnm1.ann1.1A4P42 Arachis hypogaea HOM05D003544 ORTHO05D003830 8.6e-26 120.9 97 62.9
MELO3C008223.2 Cucumis melo HOM05D003544 ORTHO05D003830 7.3e-25 117.9 73 79.5
Mapoly0020s0054 Marchantia polymorpha HOM05D003544 ORTHO05D003830 2.8e-24 115.9 126 55.6
Actinidia13886 Actinidia chinensis HOM05D003544 ORTHO05D003830 6.2e-24 114.8 73 76.7
Medtr4g064560 Medicago truncatula HOM05D003544 ORTHO05D003830 1.0e-23 114.0 124 54.8
Pp3c15_2690 Physcomitrium patens HOM05D003544 ORTHO05D003830 1.8e-23 113.2 129 53.5
Medtr4g064550 Medicago truncatula HOM05D003544 ORTHO05D003830 8.9e-23 110.9 124 54.0
PSO513G0026 Papaver somniferum HOM05D003544 ORTHO05D003830 4.4e-22 108.6 126 51.6
SMO367G0986 Selaginella moellendorffii HOM05D003544 ORTHO05D003830 4.9e-21 105.1 125 50.4
FAN06G3709 Fragaria x ananassa HOM05D003544 ORTHO05D003830 3.2e-20 102.4 123 53.7
Zm00001eb397760 Zea mays HOM05D003544 ORTHO05D003830 9.2e-20 100.9 73 68.5
Psat0ss2553g0040 Pisum sativum HOM05D003544 ORTHO05D003830 2.0e-19 99.8 123 51.2
Sabra10G0155500 Salix brachista HOM05D003544 ORTHO05D003830 1.3e-18 97.1 61 77.0
PSO675G7116 Papaver somniferum HOM05D003544 ORTHO05D003830 3.9e-18 95.5 127 48.0
AagrBONN_evm.TU.Sc2ySwM_344.3221 Anthoceros agrestis HOM05D003544 ORTHO05D003830 3.3e-17 92.4 83 60.2
CDE08G0984 Ceratophyllum demersum HOM05D003544 ORTHO05D003830 9.5e-17 90.9 124 49.2
PSO339G1503 Papaver somniferum HOM05D003544 ORTHO05D003830 3.6e-16 89.0 127 46.5
Pp3c9_2330 Physcomitrium patens HOM05D003544 ORTHO05D003830 2.0e-14 83.2 128 40.6
DCAR_010129 Daucus carota HOM05D001994 ORTHO05D001954 9.2e-12 74.3 54 64.8
Actinidia36892 Actinidia chinensis HOM05D003544 ORTHO05D003830 3.5e-11 72.4 66 63.6
arahy.Tifrunner.gnm1.ann1.J5AQBN Arachis hypogaea HOM05D003544 ORTHO05D003830 1.1e-09 67.4 55 60.0
arahy.Tifrunner.gnm1.ann1.JYY6TN Arachis hypogaea HOM05D003544 ORTHO05D003830 5.6e-09 65.1 55 58.2


User provided reference genes

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