Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 1.1e-220 769.6 392 100.0
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 1.5e-180 636.3 392 81.6
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 8.3e-179 630.6 392 78.6
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 1.4e-178 629.8 392 79.6
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 1.8e-178 629.4 392 79.8
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.6e-177 626.3 392 78.3
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.0e-165 587.0 392 74.7
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 5.0e-160 568.2 379 73.6
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 1.1e-157 560.5 381 73.5
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 8.9e-157 557.4 388 71.4
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.2e-156 557.0 388 72.2
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.3e-155 553.5 381 72.4
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 2.9e-155 552.4 377 72.7
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 1.1e-154 550.4 378 72.8
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 1.9e-154 549.7 377 71.9
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.4e-154 549.3 381 72.4
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 4.1e-154 548.5 381 71.7
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 5.4e-154 548.1 381 71.4
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 5.4e-154 548.1 381 72.2
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 1.6e-153 546.6 381 71.4
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 2.7e-153 545.8 387 71.1
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 2.7e-153 545.8 379 71.0
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 1.0e-152 543.9 381 71.1
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 1.0e-152 543.9 381 71.1
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 1.0e-152 543.9 383 70.8
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 6.6e-152 541.2 387 71.1
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 6.6e-152 541.2 388 70.1
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 8.6e-152 540.8 381 69.8
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 8.6e-152 540.8 379 71.0
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 1.1e-151 540.4 383 69.5
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 1.1e-151 540.4 381 69.8
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 4.3e-151 538.5 402 67.2
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 7.3e-151 537.7 388 70.4
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 9.5e-151 537.3 451 61.6
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 9.5e-151 537.3 381 70.3
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 9.5e-151 537.3 380 70.5
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 2.8e-150 535.8 389 68.9
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 2.8e-150 535.8 381 69.6
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 2.8e-150 535.8 386 68.7
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 3.6e-150 535.4 382 68.8
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 4.7e-150 535.0 387 68.5
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 6.2e-150 534.6 384 69.3
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 1.1e-149 533.9 386 68.7
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 1.8e-149 533.1 386 69.4
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 3.1e-149 532.3 383 69.5
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 3.1e-149 532.3 386 70.5
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 3.1e-149 532.3 383 69.2
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 4.0e-149 531.9 384 69.5
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 1.5e-148 530.0 382 68.3
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 1.5e-148 530.0 380 71.6
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 2.6e-148 529.3 367 71.9
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 2.6e-148 529.3 383 72.1
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 3.4e-148 528.9 381 69.6
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 7.6e-148 527.7 380 70.5
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 2.9e-147 525.8 381 69.6
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 4.9e-147 525.0 391 68.0
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 8.4e-147 524.2 386 69.7
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 8.4e-147 524.2 383 67.6
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 1.4e-146 523.5 388 68.8
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 1.4e-146 523.5 383 67.9
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 4.1e-146 521.9 383 69.7
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.2e-145 520.4 375 67.2
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 2.7e-145 519.2 382 68.1
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.5e-145 518.8 381 67.7
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.0e-144 517.3 382 67.0
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.7e-144 516.5 378 69.3
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 8.6e-144 514.2 386 67.6
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.5e-143 513.5 368 70.1
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.9e-143 513.1 381 66.9
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 3.3e-143 512.3 377 67.9
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 4.3e-143 511.9 378 68.5
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 5.6e-143 511.5 380 68.9
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 7.3e-143 511.1 378 66.9
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 1.2e-142 510.4 385 66.8
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 2.1e-142 509.6 375 66.7
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 3.6e-142 508.8 371 68.2
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 3.6e-142 508.8 382 68.3
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 3.6e-142 508.8 374 67.6
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 6.2e-142 508.1 373 68.6
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 8.4e-139 497.7 372 68.0
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 1.1e-138 497.3 377 66.0
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.7e-137 492.7 370 67.3
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.7e-137 492.7 370 67.3
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 3.5e-137 492.3 379 64.6
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.3e-136 490.3 383 67.4
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 2.3e-136 489.6 383 67.4
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 6.6e-136 488.0 386 63.0
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 1.9e-135 486.5 389 64.5
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 2.5e-135 486.1 357 69.2
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 9.6e-135 484.2 379 64.9
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 6.9e-133 478.0 387 65.9
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 3.9e-128 462.2 396 60.6
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 9.6e-127 457.6 382 60.2
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 2.0e-124 449.9 386 59.3
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 8.4e-123 444.5 402 59.0
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 6.0e-121 438.3 374 59.1
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 6.9e-117 424.9 367 57.2
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 4.5e-116 422.2 387 57.6
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 7.6e-116 421.4 385 58.4
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 2.7e-113 412.9 389 56.8
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.0e-112 411.0 376 58.5
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 5.3e-109 398.7 399 51.6
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 2.6e-108 396.4 386 55.4
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 3.4e-108 396.0 387 54.8
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 8.5e-107 391.3 377 53.6
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 5.5e-106 388.7 379 52.8
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 2.7e-105 386.3 374 55.1
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 4.1e-101 372.5 383 50.1
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 4.6e-97 359.0 378 47.9
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 4.8e-94 349.0 259 67.2
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.4e-90 337.4 227 69.6
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.2e-89 334.3 324 56.2
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 3.7e-86 322.8 277 59.9
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 3.2e-82 309.7 320 51.2
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 4.2e-82 309.3 374 46.3
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 8.2e-78 295.0 396 42.9
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.9e-75 286.6 181 77.3
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.9e-75 286.6 181 77.3
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 1.5e-58 231.1 386 39.4
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 3.2e-53 213.4 174 62.1
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 5.4e-45 186.0 112 77.7
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 2.0e-44 184.1 395 34.9
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.2e-36 158.3 133 61.7
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 6.6e-35 152.5 92 80.4
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 6.2e-33 146.0 146 56.2
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 1.1e-32 145.2 405 30.6
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 1.7e-30 137.9 85 77.6
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 7.6e-23 112.5 380 28.7
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 1.2e-12 78.6 69 59.4
Os01g0594800 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 3.9e-11 73.6 84 48.8
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 8.7e-11 72.4 71 49.3
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 8.7e-11 72.4 71 49.3
BcaC07g37383 Brassica carinata HOM05D005694 ORTHO05D031998 1.3e-09 68.6 79 51.9
BolC8t47687H Brassica oleracea HOM05D005694 ORTHO05D031998 1.3e-09 68.6 79 51.9
BolC8t47689H Brassica oleracea HOM05D005694 ORTHO05D031998 1.3e-09 68.6 79 51.9
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 9.9e-07 58.9 89 38.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.8e-06 57.0 387 23.0
Zm00001eb140430 Zea mays HOM05D004578 ORTHO05D005529 4.9e-06 56.6 392 21.2


User provided reference genes

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