Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 2.5e-153 545.4 278 100.0
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 6.4e-125 451.1 280 83.6
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 4.3e-121 438.3 280 81.4
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 2.7e-115 419.1 263 84.0
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 1.3e-114 416.8 249 83.9
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 3.0e-114 415.6 263 82.1
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 1.8e-103 379.8 278 69.4
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.2e-102 377.1 274 71.2
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.6e-99 366.7 266 69.9
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 2.7e-99 365.9 277 67.9
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 4.6e-99 365.2 278 65.5
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 3.3e-97 359.0 278 66.2
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 1.1e-95 354.0 276 65.9
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 2.6e-94 349.4 273 64.5
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 2.7e-91 339.3 274 60.9
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 4.6e-91 338.6 271 64.6
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 1.9e-89 333.2 277 59.9
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 1.3e-88 330.5 259 66.8
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 2.8e-88 329.3 277 59.2
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 2.8e-88 329.3 266 63.2
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 3.7e-88 328.9 262 65.3
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 1.4e-87 327.0 275 58.9
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 2.9e-85 319.3 258 63.6
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 1.9e-84 316.6 257 61.5
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 2.5e-84 316.2 302 55.0
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 2.1e-83 313.2 271 59.4
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 1.3e-82 310.5 266 58.6
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 2.3e-82 309.7 258 62.4
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 5.1e-82 308.5 277 56.0
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 8.7e-82 307.8 278 56.5
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 8.7e-82 307.8 266 60.2
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 4.3e-81 305.4 267 56.9
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.2e-78 297.4 276 55.8
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 1.2e-78 297.4 274 58.0
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.0e-77 294.3 276 54.7
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 3.8e-77 292.4 274 55.1
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 5.5e-76 288.5 227 65.2
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 2.7e-75 286.2 258 56.6
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 3.5e-75 285.8 268 53.4
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 6.0e-75 285.0 269 53.5
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 7.9e-75 284.6 283 54.1
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 1.0e-74 284.3 280 51.4
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 2.3e-74 283.1 279 50.9
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 2.3e-74 283.1 266 51.9
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 3.0e-74 282.7 268 51.5
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 6.7e-74 281.6 281 50.5
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 6.7e-74 281.6 208 68.8
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 8.7e-74 281.2 268 51.1
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 1.1e-73 280.8 263 53.2
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 3.3e-73 279.3 279 50.5
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 4.3e-73 278.9 268 50.7
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 1.3e-72 277.3 268 52.6
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 1.6e-72 276.9 276 52.5
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 6.3e-72 275.0 269 52.4
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 1.1e-71 274.2 279 53.4
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 1.4e-71 273.9 263 54.4
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 1.8e-71 273.5 263 52.5
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 4.1e-71 272.3 268 53.4
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 4.1e-71 272.3 268 51.9
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 6.9e-71 271.6 268 50.0
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 6.9e-71 271.6 269 54.6
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 9.0e-71 271.2 270 53.7
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 2.0e-70 270.0 272 54.0
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 5.9e-70 268.5 278 54.0
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 1.3e-69 267.3 272 52.9
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 2.2e-69 266.5 265 50.2
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 2.9e-69 266.2 271 51.3
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 6.5e-69 265.0 273 53.5
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.4e-68 263.8 243 56.8
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 2.5e-68 263.1 273 50.9
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 1.4e-66 257.3 264 49.6
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 2.3e-66 256.5 293 45.7
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 1.1e-65 254.2 254 50.8
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 5.7e-65 251.9 191 66.0
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 5.7e-65 251.9 217 60.8
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 1.8e-63 246.9 229 54.1
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.5e-62 243.8 285 48.1
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 1.0e-58 231.1 267 46.4
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 1.8e-58 230.3 225 53.8
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 3.0e-58 229.6 232 50.4
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 8.8e-58 228.0 208 57.2
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.1e-57 227.6 232 49.6
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 2.0e-57 226.9 227 51.5
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 2.4e-55 219.9 243 49.4
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 7.0e-55 218.4 271 46.1
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.6e-54 216.5 259 44.4
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 2.2e-53 213.4 275 43.3
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 1.9e-52 210.3 223 52.0
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 3.0e-50 203.0 262 43.1
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 3.9e-50 202.6 237 46.0
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 1.5e-49 200.7 185 51.4
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 4.8e-48 195.7 194 51.5
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.4e-47 193.4 170 59.4
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 3.5e-46 189.5 176 51.7
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 7.2e-36 155.2 138 59.4
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 4.7e-27 125.9 106 55.7
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.1e-20 104.8 85 67.1
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 1.3e-13 81.3 278 28.8
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.3e-12 76.3 61 52.5
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 9.5e-12 75.1 61 52.5
MCO04G533 Micromonas commoda HOM05D007546 ORTHO05D009542 2.6e-09 67.0 261 25.3
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 9.8e-09 65.1 93 44.1
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 9.8e-09 65.1 61 49.2
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 3.7e-08 63.2 61 49.2


User provided reference genes

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