Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib133G1405 Durio zibethinus HOM05D005648 ORTHO05D007357 8.7e-188 660.2 350 100.0
Duzib133G0061 Durio zibethinus HOM05D005648 ORTHO05D007357 4.7e-101 372.1 243 85.6
Thecc.01G358800 Theobroma cacao HOM05D005648 ORTHO05D007357 6.6e-95 351.7 235 80.4
Gorai.004G158700 Gossypium raimondii HOM05D005648 ORTHO05D007357 2.8e-93 346.3 238 80.7
COL.COLO4_12714 Corchorus olitorius HOM05D005648 ORTHO05D007357 1.4e-92 344.0 230 81.7
Gohir.A08G131300 Gossypium hirsutum HOM05D005648 ORTHO05D007357 1.4e-92 344.0 238 80.7
Gohir.D08G152800 Gossypium hirsutum HOM05D005648 ORTHO05D007357 2.4e-92 343.2 238 79.8
Haze_07444 Corylus avellana HOM05D005648 ORTHO05D007357 2.9e-74 283.1 233 65.2
QL08p048767 Quercus lobata HOM05D005648 ORTHO05D007357 1.8e-71 273.9 270 57.8
Atru.chr5.500 Acer truncatum HOM05D005648 ORTHO05D007357 4.0e-68 262.7 238 62.2
Ciclev10024354m.g Citrus clementina HOM05D005648 ORTHO05D007357 9.0e-68 261.5 224 65.2
Prupe.2G170800 Prunus persica HOM05D005648 ORTHO05D007357 2.0e-67 260.4 245 59.2
Potri.014G084800 Populus trichocarpa HOM05D005648 ORTHO05D007357 2.6e-67 260.0 231 62.3
Manes.05G034000 Manihot esculenta HOM05D005648 ORTHO05D007357 4.5e-67 259.2 226 64.6
Manes.01G256501 Manihot esculenta HOM05D005648 ORTHO05D007357 1.0e-66 258.1 225 63.6
TAR629G3222 Trochodendron aralioides HOM05D005648 ORTHO05D007357 9.3e-65 251.5 238 62.6
Cpa.g.sc11.6 Carica papaya HOM05D005648 ORTHO05D007357 2.7e-64 250.0 245 57.1
Sabra14G0061500 Salix brachista HOM05D005648 ORTHO05D007357 6.0e-64 248.8 241 58.9
Potri.002G160100 Populus trichocarpa HOM05D005648 ORTHO05D007357 1.8e-63 247.3 234 59.8
MD01G1061000 Malus domestica HOM05D005648 ORTHO05D007357 6.7e-63 245.4 245 55.1
TWI23G0553 Tripterygium wilfordii HOM05D005648 ORTHO05D007357 7.4e-62 241.9 239 59.0
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 5.3e-60 235.7 234 58.5
FAN06G1011 Fragaria x ananassa HOM05D005648 ORTHO05D007357 9.0e-60 235.0 234 58.5
FvH4_7g14300 Fragaria vesca HOM05D005648 ORTHO05D007357 1.2e-59 234.6 234 58.5
FAN10G1032 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.2e-59 234.6 234 58.1
Cfa019074 Carpinus fangiana HOM05D005648 ORTHO05D007357 1.5e-59 234.2 230 57.8
RcHm_v2.0_Chr1g0355291 Rosa chinensis HOM05D005648 ORTHO05D007357 2.6e-59 233.4 234 57.7
FAN01G1827 Fragaria x ananassa HOM05D005648 ORTHO05D007357 4.5e-59 232.6 234 59.4
MD07G1136800 Malus domestica HOM05D005648 ORTHO05D007357 4.5e-59 232.6 248 54.0
Oeu010615.1 Olea europaea HOM05D005648 ORTHO05D007357 3.8e-58 229.6 248 53.2
CiPaw.11G030900 Carya illinoinensis HOM05D005648 ORTHO05D007357 5.5e-57 225.7 233 55.4
PGR031G0771 Punica granatum HOM05D005648 ORTHO05D007357 1.2e-56 224.6 234 54.7
Rhsim01G0157500 Rhododendron simsii HOM05D005648 ORTHO05D007357 3.0e-55 219.9 238 54.2
Eucgr.D02293 Eucalyptus grandis HOM05D005648 ORTHO05D007357 8.8e-55 218.4 230 54.3
THA.LOC104825838 Tarenaya hassleriana HOM05D005648 ORTHO05D007357 2.0e-54 217.2 255 50.2
Carub.0001s0053 Capsella rubella HOM05D005648 ORTHO05D007357 2.5e-54 216.9 240 51.7
Lj3g0021061 Lotus japonicus HOM05D005648 ORTHO05D007357 4.3e-54 216.1 242 56.2
Glyma.07G070400 Glycine max HOM05D005648 ORTHO05D007357 1.3e-53 214.5 246 53.7
Dinv43819 Davidia involucrata HOM05D005648 ORTHO05D007357 2.2e-53 213.8 173 66.5
VMungo0331G0956 Vigna mungo HOM05D005648 ORTHO05D007357 8.2e-53 211.8 251 52.2
Actinidia12702 Actinidia chinensis HOM05D005648 ORTHO05D007357 3.1e-52 209.9 249 51.0
Sp1g00620 Schrenkiella parvula HOM05D005648 ORTHO05D007357 6.9e-52 208.8 242 49.6
TPR.G10304 Trifolium pratense HOM05D005648 ORTHO05D007357 1.2e-51 208.0 249 51.4
Aa31LG1G11030 Aethionema arabicum HOM05D005648 ORTHO05D007357 1.5e-51 207.6 245 51.0
Nn1g01539 Nelumbo nucifera HOM05D005648 ORTHO05D007357 3.4e-51 206.5 237 54.0
Psat4g155800 Pisum sativum HOM05D005648 ORTHO05D007357 4.5e-51 206.1 242 51.2
Migut.B01757 Erythranthe guttata HOM05D005648 ORTHO05D007357 5.9e-51 205.7 233 50.2
MBI18_g45368_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.2e-50 203.8 241 52.3
Phvul.010G099300 Phaseolus vulgaris HOM05D005648 ORTHO05D007357 2.2e-50 203.8 251 51.0
Glyma.03G008900 Glycine max HOM05D005648 ORTHO05D007357 2.9e-50 203.4 221 56.1
TAR375G0141 Trochodendron aralioides HOM05D005648 ORTHO05D007357 3.8e-50 203.0 243 52.7
GSVIVG01026935001 Vitis vinifera HOM05D005648 ORTHO05D007357 1.4e-49 201.1 183 61.7
Sed0027842 Sechium edule HOM05D005648 ORTHO05D007357 1.9e-49 200.7 233 48.1
Thhalv10007771m.g Eutrema salsugineum HOM05D005648 ORTHO05D007357 4.2e-49 199.5 243 49.4
Medtr8g030730 Medicago truncatula HOM05D005648 ORTHO05D007357 9.4e-49 198.4 267 47.9
Dinv32486 Davidia involucrata HOM05D005648 ORTHO05D007357 1.2e-48 198.0 241 50.6
AT1G01690 Arabidopsis thaliana HOM05D005648 ORTHO05D007357 7.9e-48 195.3 243 49.8
AL1G10680 Arabidopsis lyrata HOM05D005648 ORTHO05D007357 1.4e-47 194.5 244 49.6
ClCG05G001510 Citrullus lanatus HOM05D005648 ORTHO05D007357 3.0e-47 193.4 236 46.6
A06p44840 Brassica napus HOM05D005648 ORTHO05D007357 6.7e-47 192.2 252 48.4
MSTRG.20835 Avicennia marina HOM05D005648 ORTHO05D007357 8.8e-47 191.8 256 46.1
FAN03G1082 Fragaria x ananassa HOM05D005648 ORTHO05D007357 8.8e-47 191.8 191 59.7
HanXRQChr16g0522761 Helianthus annuus HOM05D005648 ORTHO05D007357 3.3e-46 189.9 243 49.0
Aqoxy7G00304 Aquilegia oxysepala HOM05D005648 ORTHO05D007357 4.4e-46 189.5 229 51.1
Solyc01g094650.4 Solanum lycopersicum HOM05D005648 ORTHO05D007357 7.4e-46 188.7 242 46.3
Lsat_1_v5_gn_4_36080 Lactuca sativa HOM05D005648 ORTHO05D007357 2.2e-45 187.2 254 48.4
CARHR000670 Cardamine hirsuta HOM05D005648 ORTHO05D007357 2.8e-45 186.8 238 49.2
Sopen01g038460 Solanum pennellii HOM05D005648 ORTHO05D007357 6.3e-45 185.7 242 45.9
MELO3C006108.2 Cucumis melo HOM05D005648 ORTHO05D007357 1.1e-44 184.9 244 42.6
C07p31360 Brassica napus HOM05D005648 ORTHO05D008650 1.8e-44 184.1 260 45.4
Cc02_g38050 Coffea canephora HOM05D005648 ORTHO05D007357 1.8e-44 184.1 186 57.0
BraA06t27356Z Brassica rapa HOM05D005648 ORTHO05D007357 2.4e-44 183.7 253 47.0
AUR62004360 Chenopodium quinoa HOM05D005648 ORTHO05D007357 3.1e-44 183.3 200 54.0
arahy.Tifrunner.gnm1.ann1.B5LD0B Arachis hypogaea HOM05D005648 ORTHO05D007357 7.0e-44 182.2 250 49.2
BcaC06g34230 Brassica carinata HOM05D005648 ORTHO05D007357 2.0e-43 180.6 260 45.4
CAN.G78.81 Capsicum annuum HOM05D005648 ORTHO05D007357 2.0e-43 180.6 247 43.7
BolC7t43677H Brassica oleracea HOM05D005648 ORTHO05D007357 2.6e-43 180.3 261 45.2
Lalb_Chr17g0339581 Lupinus albus HOM05D005648 ORTHO05D007357 7.7e-43 178.7 252 48.4
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 1.3e-42 177.9 217 45.2
Actinidia33418 Actinidia chinensis HOM05D005648 ORTHO05D007357 2.2e-42 177.2 194 53.1
DCAR_006931 Daucus carota HOM05D005648 ORTHO05D007357 2.2e-42 177.2 223 49.3
SGA_v2.0_scaffold4G02313 Striga asiatica HOM05D005648 ORTHO05D007357 2.2e-42 177.2 255 43.9
ECA234G0615 Erigeron canadensis HOM05D005648 ORTHO05D007357 1.1e-41 174.9 215 48.8
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 1.4e-41 174.5 229 50.2
Rhsim01G0157000 Rhododendron simsii HOM05D005648 ORTHO05D007357 2.5e-41 173.7 229 46.3
arahy.Tifrunner.gnm1.ann1.SJPY5G Arachis hypogaea HOM05D005648 ORTHO05D007357 3.2e-41 173.3 249 48.6
Lalb_Chr10g0096911 Lupinus albus HOM05D005648 ORTHO05D007357 1.2e-40 171.4 273 45.8
HPP92_008491 Vanilla planifolia HOM05D005648 ORTHO05D007357 2.7e-40 170.2 225 46.2
Nitab4.5_0000583g0110 Nicotiana tabacum HOM05D005648 ORTHO05D007357 3.6e-40 169.9 214 44.4
Peaxi162Scf00020g00424 Petunia axillaris HOM05D005648 ORTHO05D007357 4.7e-40 169.5 293 38.2
Peaxi162Scf00020g00041 Petunia axillaris HOM05D005648 ORTHO05D007357 6.1e-40 169.1 272 40.8
A10p00320 Brassica napus HOM05D003351 ORTHO05D003806 2.3e-39 167.2 247 44.9
BraA10t42311Z Brassica rapa HOM05D005648 ORTHO05D007357 3.9e-39 166.4 248 45.6
EL10Ac7g16797 Beta vulgaris HOM05D005648 ORTHO05D007357 8.8e-39 165.2 150 58.7
ATR0680G381 Amborella trichopoda HOM05D005648 ORTHO05D007357 1.1e-38 164.9 224 44.6
MBI18_g44363_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 3.3e-38 163.3 263 43.7
Ca_23631_v3 Cicer arietinum L. HOM05D005648 ORTHO05D007357 5.7e-38 162.5 174 55.7
Nitab4.5_0006762g0020 Nicotiana tabacum HOM05D005648 ORTHO05D007357 2.8e-37 160.2 181 45.9
C05p00330 Brassica napus HOM05D003351 ORTHO05D003806 2.6e-35 153.7 242 43.8
Sc23g0002870 Simmondsia chinensis HOM05D005648 ORTHO05D007357 1.3e-34 151.4 252 40.1
PSO478G0111 Papaver somniferum HOM05D005648 ORTHO05D007357 5.0e-34 149.4 240 42.5
PGSC0003DMG400000173 Solanum tuberosum HOM05D005648 ORTHO05D007357 5.0e-34 149.4 174 52.9
BolC5t28826H Brassica oleracea HOM05D005648 ORTHO05D007357 1.1e-33 148.3 243 43.6
AUR62022570 Chenopodium quinoa HOM05D005648 ORTHO05D007357 2.8e-29 133.7 120 56.7
Ah.05g180590 Amaranthus hybridus HOM05D005648 ORTHO05D007357 1.6e-27 127.9 155 47.7
QL08p048682 Quercus lobata HOM05D005648 ORTHO05D007357 5.9e-27 125.9 115 61.7
CDE04G3514 Ceratophyllum demersum HOM05D005648 ORTHO05D007357 7.7e-27 125.6 244 38.1
vmacro20940 Vaccinium macrocarpon HOM05D005648 ORTHO05D007357 3.8e-26 123.2 110 60.0
SHI13451 Sapria himalayana HOM05D005648 ORTHO05D007357 2.5e-25 120.6 134 51.5
BcaC06g31348 Brassica carinata HOM05D005648 ORTHO05D007357 4.2e-25 119.8 251 37.8
Zm00001eb000540 Zea mays HOM05D005648 ORTHO05D007357 3.7e-21 106.7 233 36.5
CSS0007131 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 1.4e-20 104.8 177 37.9
Zm00001eb404350 Zea mays HOM05D005648 ORTHO05D007357 3.1e-20 103.6 242 33.5
unitig_26.g9738 Utricularia gibba HOM05D005648 ORTHO05D007357 1.0e-18 98.6 252 34.1
arahy.Tifrunner.gnm1.ann1.QHU48Z Arachis hypogaea HOM05D005648 ORTHO05D007357 1.7e-18 97.8 142 46.5
SHI13452 Sapria himalayana HOM05D005648 ORTHO05D007357 3.8e-18 96.7 103 54.4
MBI01_g12685_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D007357 1.9e-17 94.4 94 54.3
Os03g0106300 Oryza sativa ssp. japonica HOM05D005648 ORTHO05D007357 3.0e-15 87.0 206 35.4
MBI18_g42710_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 4.0e-15 86.7 74 60.8
MBI06_g29680_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.0e-14 84.3 97 51.5
MBI06_g27427_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.8e-13 80.5 71 63.4
MBI17_g41096_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.8e-12 77.8 68 58.8
BcaB03g13607 Brassica carinata HOM05D003351 ORTHO05D003806 3.2e-12 77.0 165 37.0
MBI19_g11759_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D002414 1.6e-11 74.7 71 53.5
MBI18_g40590_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 5.9e-11 72.8 79 51.9
vmacro20941 Vaccinium macrocarpon HOM05D005648 ORTHO05D007357 1.8e-07 61.2 85 40.0
CSS0016999 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 4.0e-07 60.1 59 62.7


User provided reference genes

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