Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 3.4e-71 271.6 137 100.0
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 3.2e-53 211.8 137 83.2
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 7.1e-53 210.7 139 79.1
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 2.5e-50 202.2 138 78.3
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 9.4e-45 183.7 135 71.1
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 6.1e-44 181.0 135 71.1
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 7.9e-44 180.6 135 71.9
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 4.8e-41 171.4 139 65.5
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 1.1e-40 170.2 133 66.9
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.8e-40 169.5 133 66.9
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 4.1e-40 168.3 136 65.4
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 3.4e-39 165.2 137 59.9
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 4.5e-39 164.9 141 61.7
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 1.7e-38 162.9 144 62.5
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 2.2e-38 162.5 141 65.2
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 3.2e-37 158.7 138 62.3
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 5.5e-37 157.9 133 63.2
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 7.2e-37 157.5 142 62.7
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 2.1e-36 156.0 141 60.3
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 6.1e-36 154.5 139 61.2
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 5.1e-35 151.4 128 61.7
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 8.8e-35 150.6 141 59.6
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 4.4e-34 148.3 143 60.8
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 4.4e-34 148.3 131 61.1
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 5.7e-34 147.9 133 60.2
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 7.4e-34 147.5 144 55.6
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 7.4e-34 147.5 143 58.0
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 3.7e-33 145.2 137 58.4
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 4.8e-33 144.8 145 58.6
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 8.2e-33 144.1 139 57.6
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 1.8e-32 142.9 136 55.9
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 1.8e-32 142.9 141 62.4
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 2.4e-32 142.5 160 52.5
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 2.4e-32 142.5 122 59.8
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 4.1e-32 141.7 144 56.9
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 4.1e-32 141.7 142 60.6
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 5.3e-32 141.4 141 58.2
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 9.1e-32 140.6 144 59.0
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 1.5e-31 139.8 135 54.8
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.5e-31 139.8 136 57.4
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 1.5e-31 139.8 136 57.4
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.5e-31 139.8 141 56.7
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 2.0e-31 139.4 141 52.5
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 3.5e-31 138.7 141 52.5
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 3.5e-31 138.7 140 58.6
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 3.5e-31 138.7 148 58.1
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 5.9e-31 137.9 162 50.0
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 7.7e-31 137.5 148 57.4
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 1.3e-30 136.7 141 52.5
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 1.3e-30 136.7 140 57.9
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 1.7e-30 136.3 142 51.4
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 1.7e-30 136.3 141 51.1
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 2.2e-30 136.0 140 55.0
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 2.9e-30 135.6 133 56.4
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 3.8e-30 135.2 139 57.6
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 8.5e-30 134.0 141 51.1
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 1.1e-29 133.7 140 53.6
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 1.1e-29 133.7 143 53.8
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 1.4e-29 133.3 140 57.1
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.4e-29 133.3 100 69.0
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 1.9e-29 132.9 137 54.7
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 4.2e-29 131.7 135 51.1
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 7.2e-29 131.0 136 55.1
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 7.2e-29 131.0 141 51.1
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 9.4e-29 130.6 143 55.2
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 1.2e-28 130.2 136 53.7
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 1.2e-28 130.2 143 53.1
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 1.6e-28 129.8 129 58.1
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 2.1e-28 129.4 151 51.0
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 2.7e-28 129.0 143 53.8
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 4.7e-28 128.3 136 54.4
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 1.8e-27 126.3 147 51.0
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 2.3e-27 125.9 79 77.2
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 3.0e-27 125.6 121 56.2
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 6.7e-27 124.4 142 54.2
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 2.0e-26 122.9 148 51.4
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 5.7e-26 121.3 143 49.0
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 2.2e-25 119.4 139 52.5
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 2.8e-25 119.0 104 57.7
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 2.8e-25 119.0 136 50.0
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 4.8e-25 118.2 146 48.6
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 6.3e-25 117.9 143 49.7
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 8.2e-25 117.5 138 53.6
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 1.4e-24 116.7 143 51.0
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 1.4e-24 116.7 143 50.3
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 1.4e-24 116.7 143 51.0
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 1.4e-24 116.7 81 72.8
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 1.8e-24 116.3 82 67.1
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 4.1e-24 115.2 143 51.0
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 7.0e-24 114.4 142 50.0
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 7.0e-24 114.4 91 63.7
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 7.0e-24 114.4 101 58.4
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 1.2e-23 113.6 143 47.6
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 2.0e-23 112.8 141 49.6
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 2.6e-23 112.5 140 50.7
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 2.6e-23 112.5 140 50.7
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 4.5e-23 111.7 140 50.0
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 7.7e-23 110.9 107 59.8
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 1.3e-22 110.2 138 51.4
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 1.5e-21 106.7 142 49.3
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 1.5e-21 106.7 133 46.6
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 2.5e-21 105.9 78 67.9
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 2.5e-21 105.9 142 48.6
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 3.2e-21 105.5 136 47.1
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 5.5e-21 104.8 91 64.8
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 1.2e-20 103.6 88 58.0
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 1.2e-20 103.6 139 48.2
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 2.3e-19 99.4 132 48.5
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 5.2e-19 98.2 77 67.5
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 2.0e-18 96.3 103 49.5
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 3.4e-18 95.5 86 54.7
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 7.5e-18 94.4 119 53.8
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 9.7e-18 94.0 69 66.7
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 1.7e-17 93.2 123 53.7
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 7.0e-16 87.8 116 49.1
Atru.chr1.3017 Acer truncatum HOM05D006427 ORTHO05D008147 1.2e-15 87.0 91 56.0
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 5.9e-15 84.7 99 44.4
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 1.0e-14 84.0 120 43.3
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 1.3e-14 83.6 98 51.0
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 2.2e-14 82.8 106 42.5
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 3.2e-13 79.0 119 46.2
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 3.2e-13 79.0 72 59.7
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 9.4e-13 77.4 89 40.4
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 8.0e-12 74.3 118 48.3
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 2.3e-11 72.8 86 41.9
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 9.8e-10 67.4 102 48.0
BolC2t11399H Brassica oleracea HOM05D006427 ORTHO05D008147 5.9e-07 58.2 108 40.7
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 5.9e-07 58.2 113 38.1


User provided reference genes

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