Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 3.7e-258 894.4 467 100.0
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 2.5e-206 722.2 479 83.1
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 3.2e-185 652.1 469 78.3
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 5.4e-185 651.4 469 78.5
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 7.3e-182 641.0 469 77.6
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 5.1e-143 511.9 454 64.5
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 1.9e-142 510.0 467 63.0
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 2.1e-141 506.5 454 64.5
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 7.9e-136 488.0 466 60.7
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 3.9e-135 485.7 454 63.4
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 8.7e-135 484.6 462 63.0
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 3.3e-134 482.6 462 63.6
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 2.8e-133 479.6 479 61.4
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 2.2e-130 469.9 458 61.4
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 6.5e-130 468.4 474 59.9
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 1.9e-129 466.8 463 61.6
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 3.6e-128 462.6 453 61.6
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 7.9e-128 461.5 462 59.5
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 2.3e-127 459.9 453 62.5
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 2.5e-126 456.4 465 59.8
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 3.3e-126 456.1 460 61.5
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 2.2e-125 453.4 455 61.1
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 6.3e-125 451.8 467 58.2
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 6.3e-125 451.8 467 59.1
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 5.3e-124 448.7 490 55.9
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 6.9e-124 448.4 468 58.3
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 5.9e-123 445.3 467 60.0
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 2.9e-122 443.0 475 58.1
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 3.8e-122 442.6 453 61.8
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 5.0e-122 442.2 453 60.7
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 1.9e-121 440.3 519 54.3
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 4.2e-121 439.1 454 60.4
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 9.4e-121 438.0 465 53.1
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.6e-120 437.2 486 57.6
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 1.8e-119 433.7 464 58.2
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.1e-118 431.0 457 60.4
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 2.6e-118 429.9 465 56.1
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 3.3e-118 429.5 459 59.0
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 5.7e-118 428.7 485 56.1
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 5.7e-118 428.7 463 58.1
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 7.4e-118 428.3 464 59.1
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 2.2e-117 426.8 505 55.2
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 3.7e-117 426.0 462 56.7
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 6.3e-117 425.2 461 58.4
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 3.1e-116 422.9 461 57.9
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 3.1e-116 422.9 482 55.4
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 3.1e-116 422.9 468 57.5
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 9.1e-116 421.4 460 55.9
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 9.1e-116 421.4 458 57.9
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 1.2e-115 421.0 458 56.3
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 2.0e-115 420.2 453 59.4
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.3e-114 417.5 453 58.3
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 1.7e-114 417.2 453 58.5
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 1.1e-113 414.5 460 54.6
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 4.2e-113 412.5 461 56.2
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.2e-113 412.5 458 57.6
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 7.2e-113 411.8 462 55.6
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 7.2e-113 411.8 462 55.8
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.4e-111 407.5 511 53.8
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 5.2e-111 405.6 460 56.7
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 2.6e-110 403.3 525 46.5
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 5.7e-110 402.1 457 56.5
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 6.3e-109 398.7 464 56.5
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 1.8e-108 397.1 456 55.0
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 4.1e-108 396.0 508 52.0
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.6e-107 394.0 470 54.0
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 3.5e-107 392.9 463 54.6
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 8.8e-103 378.3 460 53.0
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 7.5e-102 375.2 460 52.8
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 7.5e-102 375.2 464 53.7
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 2.8e-101 373.2 471 51.0
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 1.1e-100 371.3 463 53.1
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 1.4e-100 370.9 460 53.5
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 5.4e-100 369.0 468 53.2
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 5.4e-100 369.0 467 52.7
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 3.5e-99 366.3 468 53.0
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 1.5e-97 360.9 467 52.2
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 7.2e-97 358.6 466 52.1
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 9.4e-97 358.2 471 52.2
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 3.6e-96 356.3 471 50.5
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 6.1e-96 355.5 405 56.0
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 1.5e-94 350.9 464 51.7
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 2.0e-94 350.5 456 51.3
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 1.3e-93 347.8 467 51.6
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 4.9e-93 345.9 460 52.4
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 1.8e-92 344.0 464 51.3
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 4.5e-91 339.3 430 53.7
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 1.7e-90 337.4 467 50.5
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 1.8e-87 327.4 492 49.4
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 2.2e-85 320.5 468 48.7
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 4.6e-83 312.8 354 58.8
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.9e-82 310.1 536 45.1
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.9e-82 310.1 536 45.1
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.1e-81 308.1 481 42.4
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 1.2e-80 304.7 544 42.1
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 1.3e-77 294.7 549 44.3
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 7.3e-65 252.3 173 77.5
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.1e-52 211.8 253 47.8
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 1.6e-51 208.0 223 53.4
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.1e-51 207.6 257 45.9
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 3.4e-46 190.3 223 49.8
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.2e-45 187.6 361 44.0
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 1.4e-44 184.9 283 42.4
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.9e-41 174.5 122 73.8
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 5.3e-39 166.4 229 45.9
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 6.0e-35 152.9 187 48.7
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 4.3e-33 146.7 87 79.3
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.6e-32 144.8 82 90.2
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 2.0e-30 137.9 396 35.6
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 7.6e-30 136.0 110 66.4
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 2.8e-24 117.5 159 44.0
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 2.6e-22 110.9 144 48.6
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 4.5e-22 110.2 143 47.6
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 1.6e-19 101.7 168 47.6
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 6.1e-19 99.8 171 39.8
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 1.3e-16 92.0 341 31.1
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.4e-15 88.6 56 71.4
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 4.1e-15 87.0 84 58.3
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 7.7e-14 82.8 173 36.4
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 5.1e-10 70.1 50 70.0
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.3e-08 65.5 78 44.9


User provided reference genes

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