Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0900 Durio zibethinus HOM05D004078 ORTHO05D004823 3.1e-240 834.7 415 100.0
Duzib116G0649 Durio zibethinus HOM05D004078 ORTHO05D004823 2.2e-222 775.4 415 92.0
Thecc.08G052700 Theobroma cacao HOM05D004078 ORTHO05D004823 9.3e-221 770.0 415 91.8
COL.COLO4_26076 Corchorus olitorius HOM05D004078 ORTHO05D004823 2.8e-209 731.9 410 87.3
Cfa014016 Carpinus fangiana HOM05D004078 ORTHO05D004823 9.6e-194 680.2 415 79.0
TAR376G0337 Trochodendron aralioides HOM05D004078 ORTHO05D004823 8.2e-193 677.2 415 77.8
Haze_22719 Corylus avellana HOM05D004078 ORTHO05D004823 1.5e-191 672.9 415 78.1
Dinv31900 Davidia involucrata HOM05D004078 ORTHO05D004823 3.4e-191 671.8 415 78.6
CiPaw.07G143000 Carya illinoinensis HOM05D004078 ORTHO05D004823 2.5e-189 665.6 418 77.3
QL02p013034 Quercus lobata HOM05D004078 ORTHO05D004823 4.2e-189 664.8 414 76.8
Rhsim06G0011500 Rhododendron simsii HOM05D004078 ORTHO05D004823 7.9e-188 660.6 412 76.7
TAR628G1171 Trochodendron aralioides HOM05D004078 ORTHO05D004823 3.9e-187 658.3 415 76.1
Manes.18G008900 Manihot esculenta HOM05D004078 ORTHO05D004823 6.7e-187 657.5 415 76.9
Potri.005G246300 Populus trichocarpa HOM05D004078 ORTHO05D004823 9.7e-186 653.7 417 76.3
Aqoxy6G01920 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 2.8e-185 652.1 412 74.8
Sabra05G0190400 Salix brachista HOM05D004078 ORTHO05D004823 6.9e-184 647.5 417 75.3
Nn5g30856 Nelumbo nucifera HOM05D004078 ORTHO05D004823 3.8e-182 641.7 413 74.3
Atru.chr13.207 Acer truncatum HOM05D004078 ORTHO05D004823 1.1e-181 640.2 417 73.6
CSS0030403 Camellia sinensis var. sinensis HOM05D004078 ORTHO05D004823 9.4e-181 637.1 411 75.2
MBI05_g32275_MAGBIO Magnolia biondii HOM05D004078 ORTHO05D004823 3.1e-176 622.1 413 72.4
CANSAT25G3530 Cannabis sativa HOM05D004078 ORTHO05D004823 1.2e-175 620.2 409 73.8
Hma1.2p1_0023F.1_g015860 Hydrangea macrophylla HOM05D004078 ORTHO05D004823 7.9e-172 607.4 415 71.3
MBI09_g17152_MAGBIO Magnolia biondii HOM05D004078 ORTHO05D004823 1.8e-171 606.3 414 69.8
TWI12G0461 Tripterygium wilfordii HOM05D004078 ORTHO05D004823 8.2e-169 597.4 411 71.3
Thecc.08G052600 Theobroma cacao HOM05D004078 ORTHO05D004823 7.0e-168 594.3 415 71.1
TWI56G1016 Tripterygium wilfordii HOM05D004078 ORTHO05D004823 1.8e-163 579.7 413 70.7
Hma1.2p1_0023F.1_g015830 Hydrangea macrophylla HOM05D004078 ORTHO05D004823 3.0e-163 578.9 415 69.4
Potri.002G015800 Populus trichocarpa HOM05D004078 ORTHO05D004823 1.5e-162 576.6 379 74.1
ClCG08G013990 Citrullus lanatus HOM05D004078 ORTHO05D004823 7.5e-162 574.3 408 68.9
MELO3C011335.2 Cucumis melo HOM05D004078 ORTHO05D004823 4.8e-161 571.6 411 67.6
ATR0661G241 Amborella trichopoda HOM05D004078 ORTHO05D004823 2.4e-160 569.3 412 65.5
Actinidia16270 Actinidia chinensis HOM05D004078 ORTHO05D004823 4.1e-160 568.5 408 67.6
Hma1.2p1_0028F.1_g017320 Hydrangea macrophylla HOM05D004078 ORTHO05D004823 9.1e-160 567.4 414 68.4
Lalb_Chr08g0246321 Lupinus albus HOM05D004078 ORTHO05D004823 8.5e-158 560.8 413 66.6
PSO675G8915 Papaver somniferum HOM05D004078 ORTHO05D004823 1.5e-157 560.1 417 66.4
TWI56G0120 Tripterygium wilfordii HOM05D004078 ORTHO05D004823 1.5e-157 560.1 413 68.5
TWI56G0218 Tripterygium wilfordii HOM05D004078 ORTHO05D004823 1.5e-157 560.1 413 68.5
Dinv31901 Davidia involucrata HOM05D004078 ORTHO05D004823 1.6e-156 556.6 412 66.3
Sed0013676 Sechium edule HOM05D004078 ORTHO05D004823 2.7e-156 555.8 399 66.7
SEGI_37656 Sequoiadendron giganteum HOM05D004078 ORTHO05D004823 3.6e-156 555.4 414 66.4
PSO541G4079 Papaver somniferum HOM05D004078 ORTHO05D004823 1.8e-155 553.1 414 65.9
SEGI_03953 Sequoiadendron giganteum HOM05D004078 ORTHO05D004823 1.8e-155 553.1 410 66.6
Glyma.06G020300 Glycine max HOM05D004078 ORTHO05D004823 5.2e-155 551.6 416 66.6
Glyma.04G020200 Glycine max HOM05D004078 ORTHO05D004823 6.8e-155 551.2 416 65.6
CAN.G311.82 Capsicum annuum HOM05D004078 ORTHO05D004823 9.8e-154 547.4 415 66.3
PGSC0003DMG400009959 Solanum tuberosum HOM05D004078 ORTHO05D004823 1.7e-153 546.6 393 67.7
Atru.chr13.206 Acer truncatum HOM05D004078 ORTHO05D004823 2.2e-153 546.2 410 64.6
Sopen04g035680 Solanum pennellii HOM05D004078 ORTHO05D004823 3.7e-153 545.4 397 67.3
Solyc04g082030.1 Solanum lycopersicum HOM05D004078 ORTHO05D004823 4.8e-153 545.0 397 67.3
Duzib177G0502 Durio zibethinus HOM05D004078 ORTHO05D004823 7.0e-152 541.2 408 65.7
Lalb_Chr23g0265921 Lupinus albus HOM05D004078 ORTHO05D004823 1.2e-151 540.4 411 64.2
Actinidia17020 Actinidia chinensis HOM05D004078 ORTHO05D004823 2.7e-151 539.3 412 65.3
Peaxi162Scf00174g00105 Petunia axillaris HOM05D004078 ORTHO05D004823 2.7e-151 539.3 395 67.3
VMungo1309G0831 Vigna mungo HOM05D004078 ORTHO05D004823 1.3e-150 537.0 408 63.7
Thecc.05G287800 Theobroma cacao HOM05D004078 ORTHO05D004823 1.7e-150 536.6 404 66.1
Nn5g27926 Nelumbo nucifera HOM05D004078 ORTHO05D004823 1.5e-149 533.5 413 62.2
Phvul.009G020500 Phaseolus vulgaris HOM05D004078 ORTHO05D004823 4.2e-149 531.9 407 63.1
Duzib177G0280 Durio zibethinus HOM05D004078 ORTHO05D004823 2.7e-148 529.3 396 65.7
PSO423G0267 Papaver somniferum HOM05D004078 ORTHO05D004823 3.6e-148 528.9 414 63.5
TAR091G0003 Trochodendron aralioides HOM05D004078 ORTHO05D004823 2.3e-147 526.2 410 65.4
Nn5g27925 Nelumbo nucifera HOM05D004078 ORTHO05D004823 4.0e-147 525.4 415 61.4
Phvul.009G020400 Phaseolus vulgaris HOM05D004078 ORTHO05D004823 8.8e-147 524.2 411 62.3
Sed0015343 Sechium edule HOM05D004078 ORTHO05D004823 7.5e-146 521.2 399 63.9
Gorai.007G284300 Gossypium raimondii HOM05D004078 ORTHO05D004823 2.8e-145 519.2 409 62.8
Gohir.A11G254600 Gossypium hirsutum HOM05D004078 ORTHO05D004823 4.9e-145 518.5 409 63.1
Gohir.D11G264300 Gossypium hirsutum HOM05D004078 ORTHO05D004823 4.9e-145 518.5 399 63.4
TPR.G38148 Trifolium pratense HOM05D004078 ORTHO05D004823 6.3e-145 518.1 410 62.2
Medtr3g114870 Medicago truncatula HOM05D004078 ORTHO05D004823 1.4e-144 516.9 407 63.1
arahy.Tifrunner.gnm1.ann1.GGEE3T Arachis hypogaea HOM05D004078 ORTHO05D004823 1.0e-142 510.8 388 64.9
Aqoxy5G01089 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 2.9e-142 509.2 412 62.1
COL.COLO4_15291 Corchorus olitorius HOM05D004078 ORTHO05D004823 3.8e-142 508.8 394 65.2
TPR.G38230 Trifolium pratense HOM05D004078 ORTHO05D004823 1.9e-141 506.5 408 60.8
Lj1g0007451 Lotus japonicus HOM05D004078 ORTHO05D004823 3.6e-140 502.3 410 60.7
Nitab4.5_0003280g0010 Nicotiana tabacum HOM05D004078 ORTHO05D004823 6.1e-140 501.5 388 64.7
Gorai.007G284400 Gossypium raimondii HOM05D004078 ORTHO05D004823 1.8e-139 500.0 388 63.9
COL.COLO4_15294 Corchorus olitorius HOM05D004078 ORTHO05D004823 4.0e-139 498.8 407 62.4
Gohir.A11G254700 Gossypium hirsutum HOM05D004078 ORTHO05D004823 4.0e-139 498.8 388 63.9
TPR.G27977 Trifolium pratense HOM05D004078 ORTHO05D004823 8.9e-139 497.7 409 59.9
Psat0s1018g0040 Pisum sativum HOM05D004078 ORTHO05D004823 4.4e-138 495.4 412 61.2
COL.COLO4_15293 Corchorus olitorius HOM05D004078 ORTHO05D004823 1.3e-137 493.8 398 63.1
Aqoxy2G02302 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 2.7e-135 486.1 376 62.0
Aqoxy2G02303 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 1.7e-134 483.4 376 62.2
TPR.G30061 Trifolium pratense HOM05D004078 ORTHO05D004823 1.1e-133 480.7 405 59.5
Zm00001eb319850 Zea mays HOM05D004078 ORTHO05D004823 2.5e-133 479.6 418 56.9
CsaV3_2G024480 Cucumis sativus L. HOM05D004078 ORTHO05D004823 5.6e-133 478.4 333 69.4
Ciclev10020253m.g Citrus clementina HOM05D004078 ORTHO05D004823 3.6e-132 475.7 405 61.2
Ciclev10031824m.g Citrus clementina HOM05D004078 ORTHO05D004823 9.8e-130 467.6 382 61.3
Ca_15452_v3 Cicer arietinum L. HOM05D004078 ORTHO05D004823 1.3e-129 467.2 355 64.2
Os09g0543400 Oryza sativa ssp. japonica HOM05D004078 ORTHO05D004823 2.2e-129 466.5 419 56.3
FvH4_4g24730 Fragaria vesca HOM05D004078 ORTHO05D004823 2.0e-127 459.9 399 61.2
Aqoxy5G01091 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 7.8e-127 458.0 415 55.9
RcHm_v2.0_Chr3g0485811 Rosa chinensis HOM05D004078 ORTHO05D004823 3.0e-126 456.1 421 58.0
RcHm_v2.0_Chr3g0485831 Rosa chinensis HOM05D004078 ORTHO05D004823 1.1e-125 454.1 394 59.1
FvH4_4g27890 Fragaria vesca HOM05D004078 ORTHO05D004823 1.9e-125 453.4 397 59.2
FAN12G4190 Fragaria x ananassa HOM05D004078 ORTHO05D004823 4.3e-125 452.2 397 58.9
Thecc.06G067400 Theobroma cacao HOM05D004078 ORTHO05D004823 5.6e-125 451.8 316 70.6
RcHm_v2.0_Chr4g0431831 Rosa chinensis HOM05D004078 ORTHO05D004823 2.1e-124 449.9 394 59.1
RcHm_v2.0_Chr3g0485901 Rosa chinensis HOM05D004078 ORTHO05D004823 8.1e-124 448.0 416 57.0
Nitab4.5_0001270g0090 Nicotiana tabacum HOM05D004078 ORTHO05D004823 8.9e-123 444.5 411 57.4
FvH4_4g24750 Fragaria vesca HOM05D004078 ORTHO05D004823 2.6e-122 443.0 420 56.9
FvH4_4g24751 Fragaria vesca HOM05D004078 ORTHO05D004823 4.4e-122 442.2 403 58.3
CSS0037182 Camellia sinensis var. sinensis HOM05D004078 ORTHO05D004823 5.8e-122 441.8 408 55.9
FAN12G0110 Fragaria x ananassa HOM05D004078 ORTHO05D004823 5.8e-122 441.8 403 58.3
CSS0003326 Camellia sinensis var. sinensis HOM05D004078 ORTHO05D004823 9.8e-122 441.0 408 55.6
Rhsim06G0011400 Rhododendron simsii HOM05D004078 ORTHO05D004823 1.3e-121 440.7 407 57.5
Zm00001eb331690 Zea mays HOM05D004078 ORTHO05D004823 1.3e-121 440.7 420 52.6
FAN07G1093 Fragaria x ananassa HOM05D004078 ORTHO05D004823 1.7e-121 440.3 420 56.7
MD05G1034000 Malus domestica HOM05D004078 ORTHO05D004823 8.3e-121 438.0 412 54.4
MSTRG.1142 Avicennia marina HOM05D004078 ORTHO05D004823 1.9e-120 436.8 354 63.6
Manes.13G003000 Manihot esculenta HOM05D004078 ORTHO05D004823 9.2e-120 434.5 417 54.4
FAN17G0799 Fragaria x ananassa HOM05D004078 ORTHO05D004823 1.2e-119 434.1 395 58.5
Prupe.8G044900 Prunus persica HOM05D004078 ORTHO05D004823 1.5e-117 427.2 413 53.3
Solyc03g098300.1 Solanum lycopersicum HOM05D004078 ORTHO05D004823 3.3e-117 426.0 396 53.5
CAN.G637.4 Capsicum annuum HOM05D004078 ORTHO05D004823 4.3e-117 425.6 393 54.7
TPR.G27976 Trifolium pratense HOM05D004078 ORTHO05D004823 1.6e-116 423.7 405 54.6
Nitab4.5_0005973g0010 Nicotiana tabacum HOM05D004078 ORTHO05D004823 8.1e-116 421.4 392 55.1
Sopen03g029040 Solanum pennellii HOM05D004078 ORTHO05D004823 1.1e-115 421.0 396 54.3
Sopen03g029020 Solanum pennellii HOM05D004078 ORTHO05D004823 1.4e-115 420.6 396 54.3
Sopen03g029050 Solanum pennellii HOM05D004078 ORTHO05D004823 1.4e-115 420.6 396 54.3
Nitab4.5_0001180g0140 Nicotiana tabacum HOM05D004078 ORTHO05D004823 2.3e-115 419.9 392 54.8
Peaxi162Scf00171g10044 Petunia axillaris HOM05D004078 ORTHO05D004823 4.4e-114 415.6 389 54.5
Gohir.D11G264400 Gossypium hirsutum HOM05D004078 ORTHO05D004823 5.8e-114 415.2 334 62.3
FAN12G2492 Fragaria x ananassa HOM05D004078 ORTHO05D004823 3.8e-113 412.5 403 55.8
Sopen03g029030 Solanum pennellii HOM05D004078 ORTHO05D004823 4.9e-113 412.1 381 54.9
Medtr3g114890 Medicago truncatula HOM05D004078 ORTHO05D004823 6.4e-113 411.8 399 56.1
Sopen03g029060 Solanum pennellii HOM05D004078 ORTHO05D004823 1.4e-112 410.6 397 53.9
Solyc03g098310.1 Solanum lycopersicum HOM05D004078 ORTHO05D004823 6.0e-111 405.2 397 52.6
RcHm_v2.0_Chr7g0227121 Rosa chinensis HOM05D004078 ORTHO05D004823 3.9e-110 402.5 404 55.0
Thecc.05G287700 Theobroma cacao HOM05D004078 ORTHO05D004823 1.1e-109 401.0 293 66.9
Zm00001eb114090 Zea mays HOM05D004078 ORTHO05D004823 3.6e-108 396.0 424 48.1
Prupe.8G048200 Prunus persica HOM05D004078 ORTHO05D004823 1.5e-106 390.6 357 55.2
AagrBONN_evm.TU.Sc2ySwM_340.331 Anthoceros agrestis HOM05D004078 ORTHO05D004823 5.4e-104 382.1 374 51.9
MBI18_g05694_MAGBIO Magnolia biondii HOM05D004078 ORTHO05D004823 1.7e-102 377.1 404 46.5
TAR627G0362 Trochodendron aralioides HOM05D004078 ORTHO05D004823 2.5e-101 373.2 404 46.5
Mapoly0001s0543 Marchantia polymorpha HOM05D004078 ORTHO05D000931 9.6e-101 371.3 377 51.7
SMO171G0020 Selaginella moellendorffii HOM05D004078 ORTHO05D004823 8.1e-100 368.2 367 52.6
Peaxi162Scf00479g00072 Petunia axillaris HOM05D004078 ORTHO05D004823 1.1e-99 367.9 388 49.7
CSS0015589 Camellia sinensis var. sinensis HOM05D004078 ORTHO05D004823 2.0e-98 363.6 406 48.0
MD05G1036600 Malus domestica HOM05D004078 ORTHO05D004823 1.9e-96 357.1 409 48.2
CAN.G637.1 Capsicum annuum HOM05D004078 ORTHO05D004823 7.1e-96 355.1 403 47.1
MCO05G310 Micromonas commoda HOM05D004078 ORTHO05D004823 6.0e-95 352.1 403 44.4
PRCOL_00001954 Prasinoderma coloniale HOM05D004078 ORTHO05D004823 1.9e-88 330.5 397 44.3
TAR627G0085 Trochodendron aralioides HOM05D004078 ORTHO05D004823 5.5e-88 328.9 373 45.8
PGSC0003DMG400031047 Solanum tuberosum HOM05D004078 ORTHO05D004823 2.5e-85 320.1 421 43.9
Cre16.g683371 Chlamydomonas reinhardtii HOM05D004078 ORTHO05D004823 5.6e-85 318.9 387 45.5
Nn7g37243 Nelumbo nucifera HOM05D004078 ORTHO05D004823 6.2e-84 315.5 277 59.2
GSVIVG01015447001 Vitis vinifera HOM05D004078 ORTHO05D004823 2.2e-81 307.0 408 42.4
Cre03.g159500 Chlamydomonas reinhardtii HOM05D004078 ORTHO05D004823 2.5e-80 303.5 360 46.7
CDE02G0789 Ceratophyllum demersum HOM05D004078 ORTHO05D004823 1.0e-78 298.1 289 53.6
COL.COLO4_24641 Corchorus olitorius HOM05D004078 ORTHO05D004823 1.8e-78 297.4 295 56.9
Cfa026818 Carpinus fangiana HOM05D004078 ORTHO05D004823 3.8e-73 279.6 425 39.3
Sopen03g029010 Solanum pennellii HOM05D004078 ORTHO05D004823 5.0e-73 279.3 233 58.8
Prupe.8G047700 Prunus persica HOM05D004078 ORTHO05D004823 6.1e-63 245.7 288 45.8
ClCG08G013980 Citrullus lanatus HOM05D004078 ORTHO05D150179 1.0e-62 245.0 358 41.6
CAN.G20.32 Capsicum annuum HOM05D004078 ORTHO05D004823 1.2e-58 231.5 181 61.3
Os02g0482400 Oryza sativa ssp. japonica HOM05D004078 ORTHO05D004823 3.2e-56 223.4 233 49.4
PGSC0003DMG400025628 Solanum tuberosum HOM05D004078 ORTHO05D004823 7.2e-56 222.2 243 50.2
Nn7g37247 Nelumbo nucifera HOM05D004078 ORTHO05D004823 8.5e-49 198.7 173 60.1
GSVIVG01015446001 Vitis vinifera HOM05D004078 ORTHO05D004823 1.5e-45 188.0 176 54.5
Hma1.2p1_0023F.1_g015870 Hydrangea macrophylla HOM05D004078 ORTHO05D004823 2.6e-45 187.2 203 50.2
RcHm_v2.0_Chr3g0490331 Rosa chinensis HOM05D004078 ORTHO05D004823 4.8e-44 183.0 138 64.5
QL02p013060 Quercus lobata HOM05D004078 ORTHO05D004823 1.1e-43 181.8 127 70.1
GSVIVG01008730001 Vitis vinifera HOM05D004078 ORTHO05D004823 5.3e-43 179.5 307 36.5
RcHm_v2.0_Chr3g0490321 Rosa chinensis HOM05D004078 ORTHO05D004823 9.1e-43 178.7 189 50.8
PGSC0003DMG400024452 Solanum tuberosum HOM05D004078 ORTHO05D004823 1.4e-38 164.9 309 35.9
Prupe.8G048000 Prunus persica HOM05D004078 ORTHO05D004823 3.4e-37 160.2 137 56.9
AagrBONN_evm.TU.Sc2ySwM_340.327 Anthoceros agrestis HOM05D004078 ORTHO05D004823 2.2e-36 157.5 152 50.7
RcHm_v2.0_Chr3g0485801 Rosa chinensis HOM05D004078 ORTHO05D004823 1.4e-35 154.8 347 32.6
TPR.G7712 Trifolium pratense HOM05D004078 ORTHO05D004823 2.9e-33 147.1 114 57.0
Aqoxy6G01662 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 9.8e-21 105.5 82 61.0
Pp3c24_7340 Physcomitrium patens HOM05D003708 ORTHO05D004452 3.0e-17 94.0 383 26.4
Pp3c24_7341 Physcomitrium patens HOM05D003708 ORTHO05D004452 3.0e-17 94.0 383 26.4
Sabra02G0012600 Salix brachista HOM05D004078 ORTHO05D004823 6.6e-17 92.8 61 68.9
Mapoly0005s0182 Marchantia polymorpha HOM05D003708 ORTHO05D004452 3.3e-16 90.5 348 26.4
FAN12G3541 Fragaria x ananassa HOM05D004078 ORTHO05D004823 1.3e-12 78.6 259 28.2


User provided reference genes

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