Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 3.2e-306 1054.3 533 100.0
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 4.6e-241 837.8 550 80.4
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 5.0e-219 764.6 546 76.4
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 3.2e-218 761.9 553 75.2
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 1.2e-217 760.0 555 75.0
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 1.0e-195 687.2 539 68.8
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 9.5e-186 654.1 556 64.0
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.8e-185 652.5 561 63.6
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.1e-181 640.6 527 64.9
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.6e-180 636.7 551 61.5
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 2.1e-180 636.3 552 62.7
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 1.9e-173 613.2 451 70.7
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 3.5e-172 609.0 453 69.8
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 2.3e-171 606.3 563 60.0
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 3.0e-171 605.9 567 59.4
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.3e-170 602.4 536 60.3
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 1.2e-169 600.5 570 60.4
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 3.4e-167 592.4 544 61.0
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 2.2e-166 589.7 533 59.7
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 2.2e-166 589.7 545 58.0
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 1.4e-165 587.0 538 58.4
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 3.2e-165 585.9 528 59.1
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 4.2e-165 585.5 621 54.3
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 7.1e-165 584.7 546 57.9
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 9.2e-165 584.3 585 55.4
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 2.1e-164 583.2 536 60.6
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 5.6e-162 575.1 536 57.8
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 2.8e-161 572.8 542 57.6
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 6.9e-160 568.2 420 69.8
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 9.0e-160 567.8 555 57.1
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 3.8e-158 562.4 512 59.2
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 1.9e-157 560.1 503 59.0
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 5.4e-157 558.5 542 57.7
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 5.4e-157 558.5 527 57.3
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 5.4e-157 558.5 525 58.5
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 7.1e-157 558.1 542 56.6
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 2.1e-156 556.6 508 58.9
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 7.8e-156 554.7 543 58.2
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.0e-155 554.3 467 64.0
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.0e-155 554.3 547 56.7
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 1.3e-155 553.9 500 60.6
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 5.1e-155 552.0 534 56.7
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 5.1e-155 552.0 542 55.9
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 1.5e-154 550.4 513 57.9
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 3.3e-154 549.3 555 55.0
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 9.6e-154 547.7 448 63.4
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 9.6e-154 547.7 451 61.2
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 9.6e-154 547.7 545 55.2
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 1.6e-153 547.0 555 56.4
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 6.2e-153 545.0 558 55.4
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 6.2e-153 545.0 542 55.9
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 8.1e-153 544.7 532 55.5
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 8.1e-153 544.7 452 62.2
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 1.1e-152 544.3 527 58.1
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 6.4e-150 535.0 545 55.4
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 1.4e-149 533.9 446 61.4
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 1.2e-148 530.8 486 59.7
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 6.0e-148 528.5 579 53.2
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.0e-147 527.7 539 53.2
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 5.6e-146 521.9 469 59.5
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 8.1e-145 518.1 535 53.1
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 5.3e-144 515.4 511 57.3
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 6.9e-144 515.0 541 53.6
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.1e-141 507.7 521 54.7
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 4.2e-141 505.8 538 53.7
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 1.2e-140 504.2 538 53.9
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.6e-140 503.8 508 54.9
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 3.5e-140 502.7 510 54.5
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 4.6e-140 502.3 510 54.5
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 6.0e-140 501.9 536 52.6
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 3.9e-139 499.2 538 54.1
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 3.9e-139 499.2 527 53.7
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 8.7e-139 498.0 541 52.5
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.1e-138 497.7 535 52.1
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 4.3e-138 495.7 416 64.2
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 5.7e-138 495.4 534 51.7
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.6e-137 493.8 538 52.2
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 1.6e-137 493.8 521 53.6
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 1.6e-137 493.8 453 58.1
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 2.8e-137 493.0 503 55.1
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 4.8e-137 492.3 508 54.5
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 3.1e-136 489.6 507 54.2
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 3.1e-136 489.6 507 54.2
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.7e-134 483.8 453 56.5
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.5e-133 478.8 538 52.0
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 2.7e-132 476.5 478 56.7
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 8.7e-131 471.5 531 52.0
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 9.7e-130 468.0 517 51.5
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 1.2e-127 461.1 555 50.5
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.6e-127 459.9 550 49.1
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 4.5e-127 459.1 334 68.6
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 5.9e-127 458.8 560 47.7
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.7e-126 457.2 538 50.4
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 4.8e-121 439.1 376 61.2
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.8e-120 437.2 452 53.8
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.0e-118 431.4 254 80.3
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 1.1e-109 401.4 255 74.5
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 7.0e-104 382.1 299 67.9
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 8.5e-102 375.2 557 40.6
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 6.1e-100 369.0 454 45.6
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 8.8e-99 365.2 534 40.6
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 8.0e-92 342.0 225 72.4
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 1.8e-91 340.9 439 48.7
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.5e-85 320.5 410 48.0
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 1.6e-84 317.8 295 53.9
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 6.8e-83 312.4 237 64.1
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 2.7e-71 273.9 449 38.8
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 6.0e-71 272.7 246 58.9
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 1.1e-56 225.3 170 66.5
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 3.9e-54 216.9 462 32.3
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 4.7e-52 209.9 248 42.7
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 6.0e-47 193.0 237 51.1
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 3.2e-40 170.6 182 53.3
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 5.8e-34 149.8 106 73.6
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.1e-32 145.6 275 39.3
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 1.9e-24 118.2 212 41.0
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 4.2e-24 117.1 197 37.6
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.1e-23 114.8 194 42.3
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.1e-22 110.2 73 68.5
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 6.7e-22 109.8 313 27.8
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.8e-19 101.7 105 50.5
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 5.9e-18 96.7 48 93.8
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 1.0e-17 95.9 166 42.8
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 6.5e-17 93.2 65 67.7
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 1.6e-15 88.6 210 35.7
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.3e-13 80.9 145 39.3
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 7.4e-13 79.7 142 40.8
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 1.3e-12 79.0 39 87.2
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 8.2e-12 76.3 111 38.7
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 1.1e-08 65.9 36 80.6
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 2.5e-08 64.7 160 32.5
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 3.6e-07 60.8 76 47.4


User provided reference genes

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