Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 3.5e-66 255.0 145 100.0
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.0e-65 253.4 145 88.3
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.0e-65 253.4 145 88.3
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.0e-65 253.4 145 88.3
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 2.3e-65 252.3 145 87.6
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 6.2e-63 244.2 145 93.8
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.8e-62 242.7 145 86.2
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.2e-61 240.0 145 84.8
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 4.4e-61 238.0 145 84.8
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 9.9e-61 236.9 143 85.3
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 9.9e-61 236.9 145 84.1
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.3e-60 236.5 144 84.7
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.7e-60 236.1 144 81.9
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 6.4e-60 234.2 145 82.8
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 1.9e-59 232.6 145 82.1
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 1.9e-59 232.6 145 80.7
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 3.2e-59 231.9 145 82.1
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 4.1e-59 231.5 143 82.5
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.6e-58 229.6 143 82.5
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 1.0e-57 226.9 145 80.0
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 1.0e-57 226.9 146 81.5
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 1.3e-57 226.5 146 80.1
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 1.7e-57 226.1 145 80.0
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 3.0e-57 225.3 145 81.4
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 3.0e-57 225.3 145 81.4
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 3.9e-57 224.9 143 81.1
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 3.9e-57 224.9 143 81.1
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 3.9e-57 224.9 145 82.8
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 3.9e-57 224.9 145 80.7
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.9e-57 224.9 142 80.3
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 5.1e-57 224.6 145 80.7
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 5.1e-57 224.6 143 82.5
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 6.6e-57 224.2 145 80.7
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 8.6e-57 223.8 145 79.3
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 8.6e-57 223.8 145 91.7
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.1e-56 223.4 145 80.0
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 1.5e-56 223.0 145 82.1
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 1.5e-56 223.0 145 80.0
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 2.5e-56 222.2 149 80.5
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 3.3e-56 221.9 145 78.6
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 3.3e-56 221.9 146 79.5
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 4.3e-56 221.5 146 79.5
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 7.3e-56 220.7 145 79.3
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 9.5e-56 220.3 145 79.3
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.6e-55 219.5 146 76.7
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 2.1e-55 219.2 146 79.5
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 2.1e-55 219.2 141 80.9
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 2.8e-55 218.8 145 80.0
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 2.8e-55 218.8 150 78.0
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.1e-55 217.2 145 77.9
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.1e-55 217.2 145 77.9
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 8.1e-55 217.2 145 77.9
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 2.4e-54 215.7 142 80.3
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 2.4e-54 215.7 157 73.2
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 5.2e-54 214.5 145 78.6
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 5.2e-54 214.5 145 77.9
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 6.8e-54 214.2 145 76.6
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 6.8e-54 214.2 158 72.8
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 8.9e-54 213.8 145 78.6
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.0e-53 212.6 145 77.9
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.0e-53 212.6 143 85.3
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.0e-53 212.6 145 77.9
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 2.0e-53 212.6 145 77.2
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 2.6e-53 212.2 145 77.2
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 3.4e-53 211.8 149 75.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 3.4e-53 211.8 145 77.2
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 4.4e-53 211.5 144 84.7
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 4.4e-53 211.5 149 76.5
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 5.8e-53 211.1 145 77.2
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.8e-53 211.1 145 77.2
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.8e-53 211.1 145 77.2
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 5.8e-53 211.1 146 76.0
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 7.6e-53 210.7 143 78.3
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.3e-52 209.9 136 82.4
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 1.3e-52 209.9 135 81.5
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.7e-52 209.5 145 75.9
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 1.7e-52 209.5 145 77.9
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 2.2e-52 209.1 146 76.0
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 2.2e-52 209.1 146 76.0
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 2.2e-52 209.1 146 76.0
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 2.2e-52 209.1 146 76.0
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 2.2e-52 209.1 146 76.0
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 2.2e-52 209.1 146 76.0
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 2.2e-52 209.1 145 75.9
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 2.9e-52 208.8 149 75.8
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 2.9e-52 208.8 146 76.0
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 2.9e-52 208.8 146 76.0
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 2.9e-52 208.8 146 76.0
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 3.8e-52 208.4 146 76.0
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 3.8e-52 208.4 146 75.3
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 3.8e-52 208.4 149 75.2
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 4.9e-52 208.0 146 76.0
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 4.9e-52 208.0 134 82.1
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 6.4e-52 207.6 143 76.9
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 6.4e-52 207.6 146 75.3
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 6.4e-52 207.6 146 76.0
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 8.4e-52 207.2 146 75.3
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 8.4e-52 207.2 146 76.0
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 1.1e-51 206.8 146 74.7
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 1.1e-51 206.8 149 74.5
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.1e-51 206.8 133 82.0
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 1.1e-51 206.8 145 76.6
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 1.4e-51 206.5 145 75.9
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.4e-51 206.5 146 75.3
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 3.2e-51 205.3 145 75.2
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 3.2e-51 205.3 134 80.6
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 3.2e-51 205.3 146 75.3
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 5.4e-51 204.5 147 75.5
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 5.4e-51 204.5 145 75.2
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 5.4e-51 204.5 144 77.1
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 5.4e-51 204.5 144 77.1
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 1.6e-50 203.0 202 58.9
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 1.6e-50 203.0 147 74.1
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 2.1e-50 202.6 144 75.7
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 3.5e-50 201.8 129 82.9
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.5e-50 201.8 133 90.2
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 6.0e-50 201.1 158 69.0
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 6.0e-50 201.1 158 71.5
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 1.7e-49 199.5 152 73.0
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 3.0e-49 198.7 145 73.8
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 80.7
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.5e-48 196.4 132 75.8
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 4.3e-48 194.9 135 76.3
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 1.2e-47 193.4 127 79.5
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.2e-47 191.0 151 70.2
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 1.1e-46 190.3 146 71.9
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 1.8e-46 189.5 147 77.6
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 6.9e-46 187.6 145 80.7
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 6.9e-46 187.6 181 61.3
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 1.2e-45 186.8 145 71.0
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 1.2e-45 186.8 145 71.0
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 1.2e-45 186.8 145 71.0
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 2.0e-45 186.0 143 72.0
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 3.4e-45 185.3 142 77.5
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 9.9e-45 183.7 144 70.1
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 3.8e-44 181.8 145 69.7
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.8e-44 181.8 169 62.7
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 5.4e-43 177.9 87 100.0
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 3.5e-42 175.3 136 75.0
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 4.6e-42 174.9 143 68.5
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 7.8e-42 174.1 121 76.9
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 3.9e-41 171.8 84 97.6
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.9e-41 171.8 133 71.4
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.1e-40 170.2 146 67.8
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 1.5e-40 169.9 143 67.1
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 3.3e-40 168.7 145 64.8
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 4.3e-40 168.3 121 75.2
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 2.8e-39 165.6 156 62.8
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.8e-38 162.9 116 75.0
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 2.4e-38 162.5 139 66.2
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 3.1e-38 162.2 145 65.5
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.9e-38 161.0 121 74.4
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.5e-37 159.8 124 71.8
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 7.6e-37 157.5 87 88.5
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 9.9e-37 157.1 143 62.9
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 1.9e-35 152.9 123 81.3
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 1.8e-33 146.4 112 71.4
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 5.1e-33 144.8 144 57.6
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 1.1e-32 143.7 136 63.2
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.5e-32 143.3 84 81.0
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 1.4e-30 136.7 99 74.7
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 2.0e-29 132.9 137 54.7
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 3.4e-29 132.1 104 71.2
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 4.5e-29 131.7 132 64.4
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 2.4e-27 125.9 112 64.3
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 6.0e-26 121.3 69 82.6
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.0e-25 120.6 119 58.8
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.0e-25 120.6 119 58.8
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.0e-25 119.0 64 89.1
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 3.3e-24 115.5 132 53.0
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.3e-24 115.5 105 65.7
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 4.3e-24 115.2 132 53.0
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 1.6e-23 113.2 99 67.7
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.2e-23 111.3 143 50.3
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.5e-19 99.4 82 63.4
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 2.3e-17 92.8 45 91.1
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-16 90.5 81 65.4
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-16 90.5 78 64.1
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.5e-16 90.1 77 66.2
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 2.2e-15 86.3 85 63.5
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 2.6e-13 79.3 77 62.3
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3


User provided reference genes

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