Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G0281 Durio zibethinus HOM05D005474 ORTHO05D006551 1.2e-52 209.5 101 100.0
Duzib084G1138 Durio zibethinus HOM05D005474 ORTHO05D006551 1.6e-41 172.6 81 100.0
Gohir.D12G237600 Gossypium hirsutum HOM05D005474 ORTHO05D006551 2.5e-39 165.2 81 95.1
Gorai.008G254400 Gossypium raimondii HOM05D005474 ORTHO05D006551 2.5e-39 165.2 81 95.1
Thecc.03G298100 Theobroma cacao HOM05D005474 ORTHO05D006551 3.3e-39 164.9 81 95.1
Gohir.A12G236400 Gossypium hirsutum HOM05D005474 ORTHO05D006551 5.7e-39 164.1 81 93.8
COL.COLO4_10702 Corchorus olitorius HOM05D005474 ORTHO05D006551 3.7e-38 161.4 81 90.1
THA.LOC104806435 Tarenaya hassleriana HOM05D005474 ORTHO05D006551 4.2e-34 147.9 80 83.8
CARHR231240 Cardamine hirsuta HOM05D005474 ORTHO05D006551 1.2e-33 146.4 80 80.0
QL02p030435 Quercus lobata HOM05D005474 ORTHO05D006551 1.2e-33 146.4 81 81.5
AL7G29500 Arabidopsis lyrata HOM05D005474 ORTHO05D006551 2.7e-33 145.2 80 78.8
Sp7g21810 Schrenkiella parvula HOM05D005474 ORTHO05D006551 3.5e-33 144.8 80 80.0
BolC1t01832H Brassica oleracea HOM05D005474 ORTHO05D006551 6.1e-33 144.1 80 76.2
Cpa.g.sc128.67 Carica papaya HOM05D005474 ORTHO05D006551 6.1e-33 144.1 76 81.6
Atru.chr9.1979 Acer truncatum HOM05D005474 ORTHO05D006551 1.0e-32 143.3 78 82.1
Atru.chr9.1994 Acer truncatum HOM05D005474 ORTHO05D006551 1.0e-32 143.3 78 82.1
Nitab4.5_0002782g0080 Nicotiana tabacum HOM05D005474 ORTHO05D006551 1.3e-32 142.9 81 79.0
BcaC09g50941 Brassica carinata HOM05D005474 ORTHO05D006551 1.8e-32 142.5 80 75.0
A01p15160 Brassica napus HOM05D005474 ORTHO05D006551 1.8e-32 142.5 80 75.0
C01p19060 Brassica napus HOM05D005474 ORTHO05D006551 1.8e-32 142.5 80 75.0
BraA01t01454Z Brassica rapa HOM05D005474 ORTHO05D006551 1.8e-32 142.5 80 75.0
ClCG01G001840 Citrullus lanatus HOM05D005474 ORTHO05D006551 1.8e-32 142.5 81 80.2
CsaV3_5G001990 Cucumis sativus L. HOM05D005474 ORTHO05D006551 1.8e-32 142.5 81 80.2
Sed0014344 Sechium edule HOM05D005474 ORTHO05D006551 2.3e-32 142.1 81 80.2
Cfa012014 Carpinus fangiana HOM05D005474 ORTHO05D006551 3.0e-32 141.7 81 79.0
Haze_09055 Corylus avellana HOM05D005474 ORTHO05D006551 3.0e-32 141.7 81 79.0
MELO3C005754.2 Cucumis melo HOM05D005474 ORTHO05D006551 3.0e-32 141.7 81 80.2
Thhalv10025382m.g Eutrema salsugineum HOM05D005474 ORTHO05D006551 3.0e-32 141.7 80 76.2
Lsat_1_v5_gn_6_83981 Lactuca sativa HOM05D005474 ORTHO05D006551 5.1e-32 141.0 81 76.5
BcaNung01092 Brassica carinata HOM05D005474 ORTHO05D006551 6.7e-32 140.6 76 78.9
Nn3g19016 Nelumbo nucifera HOM05D005474 ORTHO05D006551 6.7e-32 140.6 81 77.8
SalBow1G1678 Salvia bowleyana HOM05D005474 ORTHO05D006551 6.7e-32 140.6 74 82.4
SalBow1G8106 Salvia bowleyana HOM05D005474 ORTHO05D006551 6.7e-32 140.6 74 82.4
Aa31LG6G7070 Aethionema arabicum HOM05D005474 ORTHO05D006551 8.7e-32 140.2 78 79.5
MBI06_g08456_MAGBIO Magnolia biondii HOM05D005474 ORTHO05D006551 8.7e-32 140.2 81 77.8
CiPaw.11G121500 Carya illinoinensis HOM05D005474 ORTHO05D006551 1.1e-31 139.8 81 77.8
TAR374G0037 Trochodendron aralioides HOM05D005474 ORTHO05D006551 1.1e-31 139.8 81 76.5
Carub.0007s1727 Capsella rubella HOM05D005474 ORTHO05D006551 1.5e-31 139.4 76 80.3
TAR629G2557 Trochodendron aralioides HOM05D005474 ORTHO05D006551 1.5e-31 139.4 81 77.8
AT4G23860 Arabidopsis thaliana HOM05D005474 ORTHO05D006551 1.9e-31 139.0 76 78.9
Ciclev10020308m.g Citrus clementina HOM05D005474 ORTHO05D006551 1.9e-31 139.0 83 77.1
PSO063G4762 Papaver somniferum HOM05D005474 ORTHO05D006551 1.9e-31 139.0 81 77.8
PSO170G1345 Papaver somniferum HOM05D005474 ORTHO05D006551 1.9e-31 139.0 81 77.8
PGSC0003DMG400012286 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.9e-31 139.0 81 76.5
CAN.G532.121 Capsicum annuum HOM05D005474 ORTHO05D006551 2.5e-31 138.7 81 76.5
ATR0602G179 Amborella trichopoda HOM05D005474 ORTHO05D006551 3.3e-31 138.3 81 75.3
Cc08_g16070 Coffea canephora HOM05D005474 ORTHO05D006551 3.3e-31 138.3 81 77.8
Sopen08g030580 Solanum pennellii HOM05D005474 ORTHO05D006551 3.3e-31 138.3 81 76.5
vmacro11424 Vaccinium macrocarpon HOM05D005474 ORTHO05D006551 3.3e-31 138.3 81 76.5
Aqoxy7G00102 Aquilegia oxysepala HOM05D005474 ORTHO05D006551 5.7e-31 137.5 81 75.3
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 7.4e-31 137.1 81 75.3
MD14G1128900 Malus domestica HOM05D005474 ORTHO05D006551 9.7e-31 136.7 81 75.3
Ca_24501_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 1.3e-30 136.3 81 72.8
Ca_29734_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 1.3e-30 136.3 81 72.8
Psat2g185600 Pisum sativum HOM05D005474 ORTHO05D006551 1.3e-30 136.3 76 77.6
Sabra03G0101000 Salix brachista HOM05D005474 ORTHO05D006551 1.3e-30 136.3 91 70.3
Sed0020716 Sechium edule HOM05D005474 ORTHO05D006551 1.3e-30 136.3 81 76.5
TWI12G0204 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 1.3e-30 136.3 81 74.1
Sc22g0005000 Simmondsia chinensis HOM05D005474 ORTHO05D006551 1.6e-30 136.0 76 80.3
TPR.G25600 Trifolium pratense HOM05D005474 ORTHO05D006551 1.6e-30 136.0 81 74.1
MSTRG.13885 Avicennia marina HOM05D005474 ORTHO05D006551 2.2e-30 135.6 83 77.1
Prupe.5G120100 Prunus persica HOM05D005474 ORTHO05D006551 2.2e-30 135.6 81 74.1
Rhsim02G0243400 Rhododendron simsii HOM05D005474 ORTHO05D006551 2.2e-30 135.6 81 74.1
SGA_v2.0_scaffold144G35858 Striga asiatica HOM05D005474 ORTHO05D006551 2.2e-30 135.6 83 77.1
Glyma.11G017200 Glycine max HOM05D005474 ORTHO05D006551 2.8e-30 135.2 81 74.1
Manes.01G049100 Manihot esculenta HOM05D005474 ORTHO05D006551 2.8e-30 135.2 81 75.3
Potri.001G091600 Populus trichocarpa HOM05D005474 ORTHO05D006551 2.8e-30 135.2 81 75.3
HPP92_026770 Vanilla planifolia HOM05D005474 ORTHO05D006551 2.8e-30 135.2 81 74.1
Glyma.01G225700 Glycine max HOM05D005474 ORTHO05D006551 3.7e-30 134.8 81 74.1
Solyc08g082320.3 Solanum lycopersicum HOM05D005474 ORTHO05D006551 3.7e-30 134.8 81 75.3
VMungo1215G0769 Vigna mungo HOM05D005474 ORTHO05D006551 3.7e-30 134.8 81 74.1
GSVIVG01019532001 Vitis vinifera HOM05D005474 ORTHO05D006551 3.7e-30 134.8 81 75.3
SalBow8G3265 Salvia bowleyana HOM05D005474 ORTHO05D006551 4.8e-30 134.4 76 78.9
CSS0001924 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 6.3e-30 134.0 78 76.9
Actinidia22160 Actinidia chinensis HOM05D005474 ORTHO05D006551 8.2e-30 133.7 81 72.8
Potri.003G140000 Populus trichocarpa HOM05D005474 ORTHO05D006551 8.2e-30 133.7 81 74.1
PGR042G2806 Punica granatum HOM05D005474 ORTHO05D006551 8.2e-30 133.7 76 76.3
unitig_0.g387 Utricularia gibba HOM05D005474 ORTHO05D006551 8.2e-30 133.7 78 75.6
arahy.Tifrunner.gnm1.ann1.Z0ACGZ Arachis hypogaea HOM05D005474 ORTHO05D006551 1.1e-29 133.3 80 72.5
Migut.E01253 Erythranthe guttata HOM05D005474 ORTHO05D006551 1.1e-29 133.3 83 74.7
CSS0018913 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 1.8e-29 132.5 78 75.6
Lj2C167G11 Lonicera japonica HOM05D005474 ORTHO05D006551 1.8e-29 132.5 81 72.8
Phvul.002G164600 Phaseolus vulgaris HOM05D005474 ORTHO05D006551 1.8e-29 132.5 81 71.6
ECA240G1977 Erigeron canadensis HOM05D005474 ORTHO05D006551 3.1e-29 131.7 81 69.1
Eucgr.D01738 Eucalyptus grandis HOM05D005474 ORTHO05D006551 3.1e-29 131.7 81 71.6
Medtr5g009240 Medicago truncatula HOM05D005474 ORTHO05D006551 3.1e-29 131.7 76 75.0
CANSAT21G1635 Cannabis sativa HOM05D005474 ORTHO05D006551 4.1e-29 131.3 72 80.6
CiPaw.12G083000 Carya illinoinensis HOM05D005474 ORTHO05D006551 4.1e-29 131.3 82 69.5
FvH4_5g04600 Fragaria vesca HOM05D005474 ORTHO05D006551 4.1e-29 131.3 80 73.8
MD06G1107100 Malus domestica HOM05D005474 ORTHO05D006551 4.1e-29 131.3 76 76.3
TWI56G1439 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 4.1e-29 131.3 81 72.8
Oeu063522.1 Olea europaea HOM05D005474 ORTHO05D006551 5.3e-29 131.0 72 79.2
FAN04G1263 Fragaria x ananassa HOM05D005474 ORTHO05D006551 6.9e-29 130.6 83 71.1
FAN13G0565 Fragaria x ananassa HOM05D005474 ORTHO05D006551 6.9e-29 130.6 83 71.1
FAN18G3330 Fragaria x ananassa HOM05D005474 ORTHO05D006551 6.9e-29 130.6 83 71.1
FAN08G2748 Fragaria x ananassa HOM05D005474 ORTHO05D006551 9.0e-29 130.2 74 79.7
RcHm_v2.0_Chr7g0194791 Rosa chinensis HOM05D005474 ORTHO05D006551 1.2e-28 129.8 79 75.9
FAN18G1504 Fragaria x ananassa HOM05D005474 ORTHO05D006551 2.0e-28 129.0 83 69.9
Lalb_Chr05g0211531 Lupinus albus HOM05D005474 ORTHO05D006551 2.0e-28 129.0 82 72.0
Sabra01G0068000 Salix brachista HOM05D005474 ORTHO05D006551 2.0e-28 129.0 80 76.2
EL10Ac5g12915 Beta vulgaris HOM05D005474 ORTHO05D006551 2.6e-28 128.6 76 71.1
AUR62010840 Chenopodium quinoa HOM05D005474 ORTHO05D006551 3.4e-28 128.3 76 71.1
AUR62019839 Chenopodium quinoa HOM05D005474 ORTHO05D006551 3.4e-28 128.3 76 71.1
LjContig00312_ERROPOS870357g0016174 Lotus japonicus HOM05D005474 ORTHO05D006551 5.9e-28 127.5 75 76.0
Lalb_Chr16g0376951 Lupinus albus HOM05D005474 ORTHO05D006551 1.0e-27 126.7 83 68.7
Mapoly0095s0049 Marchantia polymorpha HOM05D005474 ORTHO05D006551 2.2e-27 125.6 74 74.3
CSS0004779 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 2.9e-27 125.2 78 71.8
CDE02G2859 Ceratophyllum demersum HOM05D002290 ORTHO05D002532 2.9e-27 125.2 81 67.9
Hund14220 Selenicereus undatus HOM05D005474 ORTHO05D006551 6.5e-27 124.0 76 68.4
PGSC0003DMG401028714 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.4e-26 122.9 81 70.4
Hma1.2p1_1746F.1_g300390 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 1.9e-26 122.5 73 75.3
Hma1.2p1_1746F.1_g300398 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 1.9e-26 122.5 73 75.3
Os06g0529800 Oryza sativa ssp. japonica HOM05D005474 ORTHO05D006551 1.9e-26 122.5 80 68.8
Pp3c18_8230 Physcomitrium patens HOM05D005474 ORTHO05D006551 4.2e-26 121.3 77 71.4
Zm00001eb277940 Zea mays HOM05D005474 ORTHO05D006551 1.2e-25 119.8 75 69.3
SEGI_08425 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 1.6e-25 119.4 66 77.3
arahy.Tifrunner.gnm1.ann1.1UFI8K Arachis hypogaea HOM05D005474 ORTHO05D006551 3.6e-25 118.2 108 53.7
Peaxi162Scf00074g00931 Petunia axillaris HOM05D005474 ORTHO05D006551 6.1e-25 117.5 54 92.6
Pp3c7_4800 Physcomitrium patens HOM05D005474 ORTHO05D006551 7.9e-25 117.1 79 67.1
CSS0034140 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 6.7e-24 114.0 54 90.7
SMO200G0193 Selaginella moellendorffii HOM05D005474 ORTHO05D006551 2.5e-23 112.1 75 65.3
HanXRQChr03g0083521 Helianthus annuus HOM05D005474 ORTHO05D006551 9.7e-23 110.2 54 87.0
TAR636G0569 Trochodendron aralioides HOM05D005474 ORTHO05D006551 1.1e-21 106.7 57 82.5
SHI06991 Sapria himalayana HOM05D005474 ORTHO05D006551 1.4e-21 106.3 57 77.2
CBR_g50475 Chara braunii HOM05D005474 ORTHO05D006551 2.9e-19 98.6 79 53.2
CDE08G0829 Ceratophyllum demersum HOM05D005474 ORTHO05D006551 2.1e-17 92.4 66 63.6
Oeu034333.1 Olea europaea HOM05D005474 ORTHO05D006551 1.6e-12 76.3 34 91.2
CSS0021446 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 3.2e-10 68.6 31 87.1
PSO017G5523 Papaver somniferum HOM05D005474 ORTHO05D006551 3.6e-09 65.1 34 79.4


User provided reference genes

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