Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G0140 Durio zibethinus HOM05D003978 ORTHO05D000124 2.2e-94 349.0 180 100.0
Gorai.008G193200 Gossypium raimondii HOM05D000142 ORTHO05D000124 4.0e-43 178.7 138 80.4
Gohir.A12G177700 Gossypium hirsutum HOM05D000142 ORTHO05D000124 5.2e-43 178.3 138 80.4
Gohir.D12G180101 Gossypium hirsutum HOM05D000142 ORTHO05D000124 2.0e-42 176.4 138 79.7
Gorai.010G139100 Gossypium raimondii HOM05D000142 ORTHO05D000124 9.1e-40 167.5 140 74.3
Thecc.03G088100 Theobroma cacao HOM05D000142 ORTHO05D000124 1.6e-39 166.8 142 73.2
Gohir.A13G087800 Gossypium hirsutum HOM05D000142 ORTHO05D000124 5.5e-37 158.3 138 76.1
COL.COLO4_07595 Corchorus olitorius HOM05D000142 ORTHO05D000124 4.7e-36 155.2 149 67.8
Gohir.D13G092200 Gossypium hirsutum HOM05D000142 ORTHO05D000124 4.4e-34 148.7 141 66.7
MELO3C018668.2 Cucumis melo HOM05D000142 ORTHO05D000124 1.7e-33 146.7 139 65.5
Sed0010530 Sechium edule HOM05D000142 ORTHO05D000124 1.7e-33 146.7 138 65.9
TAR579G0004 Trochodendron aralioides HOM05D000142 ORTHO05D000124 1.1e-32 144.1 134 69.4
Gohir.A07G066300 Gossypium hirsutum HOM05D000142 ORTHO05D000124 7.0e-32 141.4 138 68.1
Duzib205G0726 Durio zibethinus HOM05D000142 ORTHO05D000124 1.7e-30 136.7 140 67.9
Lalb_Chr07g0189381 Lupinus albus HOM05D000142 ORTHO05D000124 1.7e-30 136.7 133 70.7
Glyma.05G121100 Glycine max HOM05D000142 ORTHO05D000124 5.0e-30 135.2 138 71.0
Dinv41105 Davidia involucrata HOM05D000142 ORTHO05D000124 1.5e-29 133.7 136 68.4
Phvul.002G205400 Phaseolus vulgaris HOM05D000142 ORTHO05D000124 1.5e-29 133.7 138 69.6
Gohir.D07G070800 Gossypium hirsutum HOM05D000142 ORTHO05D000124 5.5e-29 131.7 138 66.7
Gorai.001G074700 Gossypium raimondii HOM05D000142 ORTHO05D000124 5.5e-29 131.7 138 66.7
Manes.11G107800 Manihot esculenta HOM05D000142 ORTHO05D000124 2.1e-28 129.8 137 61.3
Dinv19329 Davidia involucrata HOM05D000142 ORTHO05D000124 1.8e-27 126.7 136 65.4
Potri.001G207100 Populus trichocarpa HOM05D000142 ORTHO05D000124 1.8e-27 126.7 138 63.8
TWI59G1398 Tripterygium wilfordii HOM05D000142 ORTHO05D000124 8.8e-27 124.4 146 63.0
Lalb_Chr12g0208561 Lupinus albus HOM05D000142 ORTHO05D000124 2.6e-26 122.9 132 66.7
Lj4g0010229 Lotus japonicus HOM05D000142 ORTHO05D000124 3.4e-26 122.5 141 66.0
Oeu000227.1 Olea europaea HOM05D000142 ORTHO05D000124 9.8e-26 120.9 136 61.0
Prupe.6G329800 Prunus persica HOM05D000142 ORTHO05D000124 1.7e-25 120.2 145 60.0
Os03g0836200 Oryza sativa ssp. japonica HOM05D000142 ORTHO05D000124 1.1e-24 117.5 133 60.9
VMungo0251G0304 Vigna mungo HOM05D000142 ORTHO05D000124 1.1e-24 117.5 139 62.6
Ca_18330_v3 Cicer arietinum L. HOM05D000142 ORTHO05D000124 1.4e-24 117.1 140 62.9
Lalb_Chr18g0060711 Lupinus albus HOM05D000142 ORTHO05D000124 4.1e-24 115.5 138 62.3
MSTRG.16557 Avicennia marina HOM05D000142 ORTHO05D000124 5.4e-24 115.2 135 60.7
TWI14G1323 Tripterygium wilfordii HOM05D000142 ORTHO05D000124 7.0e-24 114.8 138 61.6
arahy.Tifrunner.gnm1.ann1.DM5MZC Arachis hypogaea HOM05D000142 ORTHO05D000124 2.0e-23 113.2 184 48.4
arahy.Tifrunner.gnm1.ann1.L2NQSV Arachis hypogaea HOM05D000142 ORTHO05D000124 2.0e-23 113.2 184 48.4
Nitab4.5_0000078g0240 Nicotiana tabacum HOM05D000142 ORTHO05D000124 2.7e-23 112.8 134 59.7
MD12G1223200 Malus domestica HOM05D000142 ORTHO05D000124 4.5e-23 112.1 142 60.6
PGR042G2249 Punica granatum HOM05D000142 ORTHO05D000124 1.0e-22 110.9 136 53.7
ECA246G0072 Erigeron canadensis HOM05D000142 ORTHO05D000124 1.3e-22 110.5 140 62.9
Lj5A244T53 Lonicera japonica HOM05D000142 ORTHO05D000124 1.3e-22 110.5 132 60.6
CSS0007041 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 2.9e-22 109.4 136 59.6
Oeu000659.1 Olea europaea HOM05D003978 ORTHO05D000124 3.8e-22 109.0 138 59.4
Eucgr.G00661 Eucalyptus grandis HOM05D000142 ORTHO05D000124 5.0e-22 108.6 140 58.6
Atru.chr6.1114 Acer truncatum HOM05D000003 ORTHO05D000124 1.1e-21 107.5 148 56.1
Cc02_g21970 Coffea canephora HOM05D000142 ORTHO05D000124 1.1e-21 107.5 138 58.0
TPR.G19739 Trifolium pratense HOM05D000142 ORTHO05D000124 1.9e-21 106.7 151 49.7
HPP92_005746 Vanilla planifolia HOM05D000142 ORTHO05D000124 1.9e-21 106.7 138 52.2
TAR628G0271 Trochodendron aralioides HOM05D000142 ORTHO05D000124 3.3e-21 105.9 143 57.3
THA.LOC104819445 Tarenaya hassleriana HOM05D000142 ORTHO05D000124 4.3e-21 105.5 141 57.4
Hund26714 Selenicereus undatus HOM05D000142 ORTHO05D000124 5.6e-21 105.1 140 58.6
Hma1.2p1_0107F.1_g051630 Hydrangea macrophylla HOM05D000142 ORTHO05D000124 1.6e-20 103.6 143 55.9
MD04G1208800 Malus domestica HOM05D000142 ORTHO05D000124 2.1e-20 103.2 139 58.3
Dinv25837 Davidia involucrata HOM05D000142 ORTHO05D000124 2.8e-20 102.8 131 58.8
TAR381G1177 Trochodendron aralioides HOM05D000142 ORTHO05D000124 3.6e-20 102.4 138 58.0
Haze_10793 Corylus avellana HOM05D000142 ORTHO05D000124 6.1e-20 101.7 135 57.8
THA.LOC104821424 Tarenaya hassleriana HOM05D000142 ORTHO05D000124 6.1e-20 101.7 104 61.5
Lalb_Chr20g0123191 Lupinus albus HOM05D000142 ORTHO05D000124 8.0e-20 101.3 138 56.5
CANSAT54G3042 Cannabis sativa HOM05D000142 ORTHO05D000124 2.0e-18 96.7 115 64.3
PSO017G5645 Papaver somniferum HOM05D000142 ORTHO05D000124 5.7e-18 95.1 152 52.0
C07p35460 Brassica napus HOM05D000142 ORTHO05D000124 7.5e-18 94.7 165 43.6
Solyc10g047130.2 Solanum lycopersicum HOM05D000142 ORTHO05D000124 9.8e-18 94.4 146 52.7
PGSC0003DMG400017696 Solanum tuberosum HOM05D000142 ORTHO05D000124 1.3e-17 94.0 138 54.3
Sopen10g017290 Solanum pennellii HOM05D000142 ORTHO05D000124 2.2e-17 93.2 138 54.3
CSS0009379 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 4.9e-17 92.0 139 54.0
CSS0036546 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 4.9e-17 92.0 139 54.0
PSO063G0258 Papaver somniferum HOM05D000142 ORTHO05D000124 1.1e-16 90.9 152 50.7
Glyma.08G075700 Glycine max HOM05D000142 ORTHO05D000124 1.4e-16 90.5 107 67.3
Zm00001eb063770 Zea mays HOM05D000142 ORTHO05D000124 1.8e-16 90.1 137 49.6
Migut.N01014 Erythranthe guttata HOM05D000142 ORTHO05D000124 2.4e-16 89.7 155 51.6
Hma1.2p1_0557F.1_g178140 Hydrangea macrophylla HOM05D000142 ORTHO05D000124 3.2e-16 89.4 136 53.7
MBI19_g03289_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 3.2e-16 89.4 139 54.7
Lj7C367T7 Lonicera japonica HOM05D000142 ORTHO05D000124 4.1e-16 89.0 139 56.1
FAN05G0668 Fragaria x ananassa HOM05D000142 ORTHO05D000124 5.4e-16 88.6 146 51.4
GSVIVG01001672001 Vitis vinifera HOM05D000142 ORTHO05D000124 7.0e-16 88.2 80 71.2
Hund17414 Selenicereus undatus HOM05D000142 ORTHO05D000124 3.5e-15 85.9 142 52.1
FAN09G2280 Fragaria x ananassa HOM05D000142 ORTHO05D000124 5.9e-15 85.1 146 52.1
A06p42020 Brassica napus HOM05D000142 ORTHO05D000124 7.8e-15 84.7 172 46.5
CiPaw.05G039500 Carya illinoinensis HOM05D000142 ORTHO05D000124 5.0e-14 82.0 136 52.2
CDE07G1036 Ceratophyllum demersum HOM05D000142 ORTHO05D000124 6.6e-14 81.6 102 62.7
RcHm_v2.0_Chr3g0454141 Rosa chinensis HOM05D000142 ORTHO05D000124 1.1e-13 80.9 154 51.9
CiPaw.06G150700 Carya illinoinensis HOM05D000142 ORTHO05D000124 1.5e-13 80.5 136 50.7
FvH4_6g05361 Fragaria vesca HOM05D000142 ORTHO05D000124 4.3e-13 79.0 146 50.0
FAN02G0893 Fragaria x ananassa HOM05D000142 ORTHO05D000124 4.3e-13 79.0 146 50.0
FAN05G0947 Fragaria x ananassa HOM05D000142 ORTHO05D000124 4.3e-13 79.0 146 50.0
FAN14G2074 Fragaria x ananassa HOM05D000142 ORTHO05D000124 4.3e-13 79.0 146 50.0
FAN14G3147 Fragaria x ananassa HOM05D000142 ORTHO05D000124 4.3e-13 79.0 146 50.0
Cpa.g.sc2.51 Carica papaya HOM05D000142 ORTHO05D000124 7.3e-13 78.2 142 49.3
ECA240G0047 Erigeron canadensis HOM05D000142 ORTHO05D000124 7.3e-13 78.2 112 55.4
DCAR_014420 Daucus carota HOM05D000142 ORTHO05D000124 1.6e-12 77.0 111 52.3
Lj4A693T20 Lonicera japonica HOM05D000142 ORTHO05D000124 3.6e-12 75.9 109 56.0
QL02p098802 Quercus lobata HOM05D000142 ORTHO05D000124 8.0e-12 74.7 137 50.4
Aqoxy5G02170 Aquilegia oxysepala HOM05D000142 ORTHO05D000124 1.1e-11 74.3 137 51.1
Psat1g218600 Pisum sativum HOM05D000142 ORTHO05D000124 1.1e-11 74.3 79 69.6
Migut.C00994 Erythranthe guttata HOM05D000142 ORTHO05D000124 1.8e-11 73.6 153 51.0
C02p53080 Brassica napus HOM05D000142 ORTHO05D000124 6.8e-11 71.6 171 42.7
PGSC0003DMG400029743 Solanum tuberosum HOM05D000142 ORTHO05D000124 1.5e-10 70.5 144 46.5
RcHm_v2.0_Chr1g0378041 Rosa chinensis HOM05D000142 ORTHO05D000124 4.4e-10 68.9 86 46.5
AT3G26420 Arabidopsis thaliana HOM05D000142 ORTHO05D000124 2.9e-09 66.2 72 58.3
Thhalv10004793m.g Eutrema salsugineum HOM05D000142 ORTHO05D000124 2.9e-09 66.2 191 36.6
unitig_749.g13918 Utricularia gibba HOM05D000142 ORTHO05D000124 2.9e-09 66.2 131 48.1
A02p34580 Brassica napus HOM05D000142 ORTHO05D000124 3.7e-09 65.9 174 40.8
BraA02t08466Z Brassica rapa HOM05D000142 ORTHO05D000124 3.7e-09 65.9 174 40.8
AUR62026752 Chenopodium quinoa HOM05D000142 ORTHO05D000124 3.7e-09 65.9 59 64.4
AL5G15190 Arabidopsis lyrata HOM05D000142 ORTHO05D000124 6.4e-09 65.1 84 53.6
Rhsim11G0133600 Rhododendron simsii HOM05D003978 ORTHO05D000124 6.4e-09 65.1 73 61.6
unitig_26.g9900 Utricularia gibba HOM05D000142 ORTHO05D000124 8.3e-09 64.7 132 47.7
CARHR147440 Cardamine hirsuta HOM05D000142 ORTHO05D000124 1.1e-08 64.3 94 52.1
QL07p042820 Quercus lobata HOM05D003978 ORTHO05D006033 1.1e-08 64.3 145 42.1
Sp2g15570 Schrenkiella parvula HOM05D000142 ORTHO05D000124 4.1e-08 62.4 94 52.1
Sc20g0003410 Simmondsia chinensis HOM05D003978 ORTHO05D000124 4.1e-08 62.4 142 46.5
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 7.0e-08 61.6 139 40.3
BolC2t11382H Brassica oleracea HOM05D000142 ORTHO05D000124 2.7e-07 59.7 171 40.4
Aa31LG2G6110 Aethionema arabicum HOM05D000142 ORTHO05D000124 3.5e-07 59.3 168 41.7
TAR633G1384 Trochodendron aralioides HOM05D003978 ORTHO05D006033 3.5e-07 59.3 186 37.1
HanXRQChr03g0065761 Helianthus annuus HOM05D003978 ORTHO05D000124 1.3e-06 57.4 111 54.1
Haze_20513 Corylus avellana HOM05D003978 ORTHO05D006033 3.9e-06 55.8 114 43.0
Cfa017638 Carpinus fangiana HOM05D003978 ORTHO05D006033 6.6e-06 55.1 186 35.5
vmacro07306 Vaccinium macrocarpon HOM05D003978 ORTHO05D006033 6.6e-06 55.1 133 39.1
Zm00001eb302210 Zea mays HOM05D003978 ORTHO05D006033 6.6e-06 55.1 150 42.7
ATR0665G372 Amborella trichopoda HOM05D003978 ORTHO05D006033 8.6e-06 54.7 120 44.2
TAR636G3645 Trochodendron aralioides HOM05D001807 ORTHO05D002044 8.6e-06 54.7 144 39.6


User provided reference genes

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