Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 2.9e-260 901.4 459 100.0
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 1.2e-242 842.8 459 93.0
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.3e-239 832.8 459 91.1
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 1.1e-235 819.7 457 91.7
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 4.3e-235 817.8 459 91.1
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 1.2e-232 809.7 460 90.9
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.2e-231 805.4 460 90.2
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 4.9e-231 804.3 459 88.5
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 3.6e-210 734.9 460 80.2
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 4.8e-210 734.6 460 80.7
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.6e-208 728.8 461 78.1
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 8.4e-207 723.8 460 79.1
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 1.1e-206 723.4 462 79.4
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 4.2e-206 721.5 460 78.7
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 7.1e-206 720.7 459 79.1
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 3.5e-205 718.4 460 80.0
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 8.7e-204 713.8 486 75.1
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.6e-202 709.5 462 78.1
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.1e-201 706.8 462 76.8
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.8e-201 706.1 461 79.0
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 3.1e-201 705.3 460 77.6
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 5.3e-201 704.5 468 77.4
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 1.5e-200 703.0 460 77.2
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 4.5e-200 701.4 460 77.2
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 1.4e-198 696.4 461 77.0
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 5.5e-198 694.5 461 77.2
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 9.3e-198 693.7 461 77.4
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 9.3e-198 693.7 461 77.0
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 2.7e-197 692.2 464 75.4
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 3.5e-197 691.8 461 76.8
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 6.0e-197 691.0 464 76.9
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 6.7e-196 687.6 460 76.3
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 1.1e-195 686.8 466 75.8
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 1.5e-195 686.4 460 75.7
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 4.3e-195 684.9 461 75.5
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 5.7e-195 684.5 461 75.5
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 7.4e-195 684.1 466 75.3
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 1.3e-194 683.3 462 74.9
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 1.6e-194 682.9 462 76.4
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.6e-194 682.9 460 76.3
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 2.1e-194 682.6 461 76.1
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 3.7e-194 681.8 466 75.5
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 4.8e-194 681.4 460 75.2
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 8.2e-194 680.6 469 75.7
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 1.1e-193 680.2 461 75.3
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.4e-193 679.9 460 75.0
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 1.2e-192 676.8 455 76.5
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.5e-192 676.4 469 75.1
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 1.5e-192 676.4 461 74.6
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.0e-192 676.0 468 72.6
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 1.7e-191 672.9 465 75.1
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 2.2e-191 672.5 461 74.2
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 6.5e-191 671.0 481 70.9
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 1.4e-190 669.8 468 71.8
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.9e-190 669.5 462 72.5
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 3.2e-190 668.7 464 72.6
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 7.2e-190 667.5 469 72.7
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.7e-189 665.6 440 76.1
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 3.6e-189 665.2 465 74.4
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.0e-188 663.7 464 72.0
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 3.0e-188 662.1 509 68.0
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 3.0e-188 662.1 462 71.9
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.1e-188 661.4 464 71.8
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 1.5e-187 659.8 464 71.3
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 3.3e-187 658.7 469 72.9
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 1.3e-186 656.8 464 72.0
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 1.3e-186 656.8 464 72.0
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 1.3e-186 656.8 464 72.0
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 1.3e-186 656.8 464 70.5
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 1.6e-186 656.4 469 71.6
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 4.8e-186 654.8 461 71.4
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.1e-185 653.7 464 70.5
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 1.1e-185 653.7 469 69.9
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 1.4e-185 653.3 464 71.3
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 5.3e-185 651.4 464 70.3
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 9.1e-185 650.6 428 77.1
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 2.6e-184 649.0 464 70.7
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 3.4e-184 648.7 469 72.7
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 4.5e-184 648.3 458 72.7
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 6.5e-183 644.4 465 71.2
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 6.5e-183 644.4 465 71.2
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.4e-182 643.3 468 70.5
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 3.2e-182 642.1 494 68.0
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 1.2e-181 640.2 467 71.1
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 1.6e-181 639.8 467 70.0
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.6e-181 639.8 468 70.3
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 6.1e-181 637.9 468 70.1
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 1.4e-180 636.7 422 73.7
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 5.1e-180 634.8 468 69.7
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.0e-179 632.9 463 70.6
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 7.4e-179 630.9 463 70.8
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.7e-178 629.8 465 70.1
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 2.8e-178 629.0 467 70.2
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 6.3e-178 627.9 470 68.9
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.3e-178 627.9 465 70.5
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.1e-177 627.1 420 74.5
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.8e-177 626.3 465 69.0
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.1e-177 625.5 489 66.7
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 5.0e-175 618.2 422 72.7
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.9e-174 616.3 465 68.0
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 3.9e-172 608.6 461 67.9
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 1.1e-171 607.1 446 68.6
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 6.3e-170 601.3 398 73.6
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 5.9e-168 594.7 457 66.3
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.1e-166 590.5 427 68.1
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 1.2e-165 587.0 461 63.8
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 2.7e-165 585.9 465 65.8
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.3e-162 577.0 415 71.3
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 1.7e-162 576.6 456 64.9
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 4.1e-161 572.0 399 73.7
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 6.3e-146 521.5 320 81.2
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.1e-141 506.5 382 69.1
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.8e-137 493.4 468 54.9
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 7.0e-137 491.5 414 59.2
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.6e-128 463.8 404 57.9
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 9.5e-118 427.9 461 51.8
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.7e-103 380.6 407 52.1
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 5.1e-103 379.0 285 64.9
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 2.0e-99 367.1 552 38.0
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 9.9e-99 364.8 258 74.4
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 3.4e-75 286.6 188 74.5
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 6.5e-74 282.3 264 60.2
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 1.8e-63 247.7 255 56.9
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 2.3e-63 247.3 255 56.9
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.5e-54 218.0 210 59.0
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 1.2e-46 191.8 160 66.2
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 2.7e-43 180.6 145 64.1
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 1.3e-42 178.3 146 63.7
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 8.8e-39 165.6 119 78.2
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 1.3e-34 151.8 123 64.2
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 3.0e-31 140.6 379 29.3
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 2.0e-22 111.3 60 86.7
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 3.1e-15 87.4 59 67.8
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.2e-14 85.5 57 78.9
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 2.2e-13 81.3 73 60.3
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 1.3e-10 72.0 65 61.5


User provided reference genes

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