Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 0.0e+00 1340.9 675 100.0
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 0.0e+00 1152.5 631 90.8
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 0.0e+00 1149.4 631 90.2
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 0.0e+00 1148.3 631 90.0
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 0.0e+00 1145.6 631 90.0
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 0.0e+00 1138.3 631 90.2
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 0.0e+00 1095.5 631 86.2
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 3.3e-300 1034.6 626 81.2
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 9.5e-300 1033.1 631 80.5
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 8.9e-298 1026.5 675 76.4
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.9e-295 1018.8 631 79.4
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 3.0e-293 1011.5 627 79.1
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 4.3e-292 1007.7 629 79.3
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.3e-288 996.1 627 78.5
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.1e-287 993.0 632 77.5
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 2.4e-287 991.9 634 77.1
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 9.0e-282 973.4 610 79.0
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 1.3e-280 969.5 634 76.0
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.2e-280 968.8 608 77.8
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 8.4e-280 966.8 632 74.7
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 9.3e-279 963.4 636 74.4
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 1.2e-278 963.0 632 75.8
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 3.5e-278 961.4 631 75.1
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 6.0e-278 960.7 630 75.2
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.7e-277 959.1 632 75.6
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 5.1e-277 957.6 631 74.5
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.1e-276 956.4 632 74.1
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 9.6e-276 953.4 629 74.1
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.4e-274 949.5 632 74.5
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 4.0e-274 948.0 631 73.4
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 9.0e-274 946.8 575 79.8
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 4.5e-273 944.5 631 74.0
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.5e-273 944.5 632 74.7
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 2.2e-272 942.2 634 73.3
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 2.9e-272 941.8 631 73.5
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 3.8e-272 941.4 631 73.1
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.4e-271 939.5 631 73.2
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 1.2e-270 936.4 627 74.2
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 2.1e-270 935.6 627 73.0
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 2.7e-270 935.3 629 73.9
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.8e-269 932.6 627 72.7
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 1.8e-269 932.6 631 72.1
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 1.9e-268 929.1 627 72.1
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 5.6e-268 927.5 631 72.9
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 9.0e-266 920.2 643 71.1
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 2.0e-265 919.1 657 70.5
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 4.5e-265 917.9 631 71.8
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.0e-264 916.8 632 72.5
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 8.4e-264 913.7 632 71.7
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 1.1e-263 913.3 630 71.1
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.9e-263 912.5 627 70.5
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.5e-263 912.1 607 73.0
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 3.2e-263 911.8 627 70.5
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 7.9e-262 907.1 608 73.5
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 1.8e-261 906.0 627 70.5
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 3.0e-261 905.2 638 70.8
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 5.1e-261 904.4 637 70.6
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.8e-258 896.0 666 69.1
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 7.6e-257 890.6 591 73.6
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.9e-255 885.9 629 68.8
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 4.2e-255 884.8 628 68.9
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 4.2e-255 884.8 629 70.0
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 6.1e-254 880.9 622 71.4
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 1.0e-253 880.2 631 70.5
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 3.9e-253 878.2 596 73.0
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 9.7e-252 873.6 628 70.4
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 1.5e-249 866.3 583 72.7
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 2.0e-249 865.9 627 66.7
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 3.4e-249 865.1 629 68.8
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.7e-248 862.8 628 67.8
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 2.9e-248 862.1 627 66.7
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 3.8e-248 861.7 628 69.3
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.9e-247 859.4 632 66.9
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.2e-246 856.7 572 72.4
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 5.3e-242 841.3 638 66.8
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 2.2e-240 835.9 633 65.7
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 1.9e-239 832.8 624 68.6
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.1e-238 829.3 589 69.1
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.0e-237 827.0 627 65.4
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 2.3e-237 825.9 631 65.0
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 3.0e-237 825.5 630 65.7
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 3.9e-237 825.1 631 66.7
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 5.1e-237 824.7 629 64.5
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 6.7e-237 824.3 631 65.1
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.1e-234 817.0 633 65.1
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.1e-234 817.0 633 65.1
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.4e-226 790.0 632 62.7
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 2.7e-225 785.8 562 68.9
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 1.0e-216 757.3 625 61.3
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 3.2e-215 752.3 602 61.8
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 7.0e-202 708.0 440 78.4
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.2e-198 697.2 455 76.0
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 9.2e-186 654.4 398 80.7
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 3.9e-184 649.0 447 71.4
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.2e-182 644.0 491 64.0
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 3.5e-177 625.9 632 51.1
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.3e-176 624.0 416 73.1
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 3.8e-171 605.9 639 49.0
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.5e-151 540.0 418 66.3
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 1.6e-150 537.3 597 47.4
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.0e-148 530.4 400 65.5
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 4.3e-143 512.7 631 44.4
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 3.8e-139 499.6 607 47.8
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 9.4e-130 468.4 417 61.9
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 4.8e-110 402.9 274 75.9
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.5e-106 391.3 769 33.4
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 3.0e-51 207.6 182 56.6
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 6.4e-46 189.9 172 57.0
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 1.3e-43 182.2 214 45.3
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 2.3e-43 181.4 163 59.5
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 6.2e-41 173.3 153 57.5
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 7.6e-31 139.8 82 81.7
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 4.6e-28 130.6 90 74.4
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 2.4e-24 118.2 221 38.5
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.1e-16 92.8 55 81.8
COL.COLO4_22600 Corchorus olitorius HOM05D002762 ORTHO05D155964 1.4e-11 75.9 88 55.7
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 2.6e-10 71.6 39 82.1
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 5.7e-10 70.5 40 82.5
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 4.8e-09 67.4 47 70.2


User provided reference genes

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