Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib041G0627 Durio zibethinus HOM05D001366 ORTHO05D003220 1.9e-62 242.3 117 100.0
Atru.chr13.974 Acer truncatum HOM05D001366 ORTHO05D003220 3.3e-22 108.6 97 57.7
COL.COLO4_35285 Corchorus olitorius HOM05D001366 ORTHO05D003220 4.3e-22 108.2 93 60.2
Thecc.08G073900 Theobroma cacao HOM05D001366 ORTHO05D003220 5.6e-22 107.8 97 57.7
Gohir.A05G216400 Gossypium hirsutum HOM05D001366 ORTHO05D003220 7.3e-22 107.5 93 58.1
Gohir.D05G221000 Gossypium hirsutum HOM05D001366 ORTHO05D003220 9.5e-22 107.1 93 58.1
Gorai.009G228100 Gossypium raimondii HOM05D001366 ORTHO05D003220 9.5e-22 107.1 93 58.1
QL09p018643 Quercus lobata HOM05D001366 ORTHO05D003220 1.2e-21 106.7 97 56.7
Lalb_Chr23g0269941 Lupinus albus HOM05D001366 ORTHO05D003220 2.1e-21 105.9 97 58.8
Manes.05G189000 Manihot esculenta HOM05D001366 ORTHO05D003220 2.1e-21 105.9 97 56.7
Prupe.1G536100 Prunus persica HOM05D001366 ORTHO05D003220 4.0e-20 101.7 93 54.8
Aqoxy6G00668_Aqoxy6G00669 Aquilegia oxysepala HOM05D001366 ORTHO05D003220 1.2e-19 100.1 93 53.8
MD08G1203800 Malus domestica HOM05D001366 ORTHO05D003220 1.2e-19 100.1 93 54.8
CiPaw.07G163000 Carya illinoinensis HOM05D001366 ORTHO05D003220 3.4e-19 98.6 92 56.5
Dinv42591 Davidia involucrata HOM05D001366 ORTHO05D003220 3.4e-19 98.6 97 52.6
Lj4A85G31 Lonicera japonica HOM05D001366 ORTHO05D003220 9.8e-19 97.1 97 51.5
DCAR_029738 Daucus carota HOM05D001366 ORTHO05D003220 2.9e-18 95.5 109 47.7
Hma1.2p1_0125F.1_g058690 Hydrangea macrophylla HOM05D001366 ORTHO05D003220 6.4e-18 94.4 93 53.8
Nn5g29817 Nelumbo nucifera HOM05D001366 ORTHO05D003220 6.4e-18 94.4 97 51.5
PSO675G6980 Papaver somniferum HOM05D001366 ORTHO05D003220 6.4e-18 94.4 93 50.5
vmacro04624 Vaccinium macrocarpon HOM05D001366 ORTHO05D003220 8.3e-18 94.0 93 52.7
AL7G28770 Arabidopsis lyrata HOM05D001366 ORTHO05D003220 1.1e-17 93.6 97 53.6
AT4G24450 Arabidopsis thaliana HOM05D001366 ORTHO05D003220 1.1e-17 93.6 97 53.6
Thhalv10024230m.g Eutrema salsugineum HOM05D001366 ORTHO05D003220 3.2e-17 92.0 97 52.6
Sp7g22430 Schrenkiella parvula HOM05D001366 ORTHO05D003220 5.4e-17 91.3 108 48.1
ATR0767G073 Amborella trichopoda HOM05D001366 ORTHO05D003220 7.0e-17 90.9 105 42.9
CARHR231840 Cardamine hirsuta HOM05D001366 ORTHO05D003220 1.2e-16 90.1 97 51.5
MBI16_g27903_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D003220 1.6e-16 89.7 91 49.5
BcaC09g50868 Brassica carinata HOM05D001366 ORTHO05D003220 2.1e-16 89.4 97 51.5
A01p15810 Brassica napus HOM05D001366 ORTHO05D003220 2.1e-16 89.4 97 51.5
C01p19760 Brassica napus HOM05D001366 ORTHO05D003220 2.1e-16 89.4 97 51.5
BolC1t01904H Brassica oleracea HOM05D001366 ORTHO05D003220 2.1e-16 89.4 97 51.5
BraA01t01516Z Brassica rapa HOM05D001366 ORTHO05D003220 2.1e-16 89.4 97 51.5
Rhsim07G0213400 Rhododendron simsii HOM05D001366 ORTHO05D003220 2.1e-16 89.4 93 49.5
Carub.0007s1662 Capsella rubella HOM05D001366 ORTHO05D003220 2.7e-16 89.0 97 51.5
BcaC06g34403 Brassica carinata HOM05D001366 ORTHO05D003220 4.6e-16 88.2 95 51.6
C07p29060 Brassica napus HOM05D001366 ORTHO05D008529 4.6e-16 88.2 95 51.6
BolC7t43445H Brassica oleracea HOM05D001366 ORTHO05D008529 4.6e-16 88.2 95 51.6
Aa31LG4G9550 Aethionema arabicum HOM05D001366 ORTHO05D003220 7.8e-16 87.4 97 50.5
THA.LOC104799855 Tarenaya hassleriana HOM05D001366 ORTHO05D003220 7.8e-16 87.4 97 51.5
CDE04G3375 Ceratophyllum demersum HOM05D001366 ORTHO05D003220 2.3e-15 85.9 93 49.5
AagrBONN_evm.TU.Sc2ySwM_344.4529 Anthoceros agrestis HOM05D001366 ORTHO05D003220 3.0e-15 85.5 93 50.5
Pp3c3_11200 Physcomitrium patens HOM05D001366 ORTHO05D003220 1.1e-14 83.6 93 48.4
AagrBONN_evm.TU.Sc2ySwM_362.4 Anthoceros agrestis HOM05D001366 ORTHO05D003220 1.9e-14 82.8 97 48.5
ATR1152G017 Amborella trichopoda HOM05D001366 ORTHO05D003220 5.6e-14 81.3 93 47.3
Hund25378 Selenicereus undatus HOM05D001366 ORTHO05D003220 7.3e-14 80.9 94 46.8
Mapoly0038s0029 Marchantia polymorpha HOM05D001366 ORTHO05D003220 1.2e-13 80.1 93 46.2
PSO832G0819 Papaver somniferum HOM05D001366 ORTHO05D003220 1.2e-13 80.1 93 46.2
TWI18G0188 Tripterygium wilfordii HOM05D001366 ORTHO05D003220 1.2e-13 80.1 93 46.2
Gorai.008G160400 Gossypium raimondii HOM05D001366 ORTHO05D003220 1.6e-13 79.7 89 47.2
PSO063G5092 Papaver somniferum HOM05D001366 ORTHO05D003220 1.6e-13 79.7 93 45.2
Pp3c8_6520 Physcomitrium patens HOM05D001366 ORTHO05D003220 1.6e-13 79.7 107 42.1
Pp3c8_6536 Physcomitrium patens HOM05D001366 ORTHO05D003220 1.6e-13 79.7 107 42.1
PGR119G2090 Punica granatum HOM05D001366 ORTHO05D003220 1.6e-13 79.7 93 45.2
Cc11_g15490 Coffea canephora HOM05D001366 ORTHO05D003220 2.1e-13 79.3 93 44.1
Nitab4.5_0002255g0040 Nicotiana tabacum HOM05D001366 ORTHO05D003220 2.1e-13 79.3 104 41.3
Nitab4.5_0007943g0010 Nicotiana tabacum HOM05D001366 ORTHO05D003220 2.1e-13 79.3 104 41.3
Hund06013 Selenicereus undatus HOM05D001366 ORTHO05D003220 2.1e-13 79.3 90 46.7
Lj6C809G13 Lonicera japonica HOM05D001366 ORTHO05D003220 2.8e-13 79.0 93 48.4
HPP92_003084 Vanilla planifolia HOM05D001366 ORTHO05D003220 2.8e-13 79.0 93 47.3
Cfa009191 Carpinus fangiana HOM05D001366 ORTHO05D003220 3.6e-13 78.6 93 44.1
CDE06G0295 Ceratophyllum demersum HOM05D001366 ORTHO05D003220 3.6e-13 78.6 93 48.4
CsaV3_5G031320 Cucumis sativus L. HOM05D001366 ORTHO05D003220 3.6e-13 78.6 93 46.2
Glyma.18G142500 Glycine max HOM05D001366 ORTHO05D003220 4.7e-13 78.2 93 46.2
Lalb_Chr16g0392241 Lupinus albus HOM05D001366 ORTHO05D003220 4.7e-13 78.2 93 47.3
TWI75G1447 Tripterygium wilfordii HOM05D001366 ORTHO05D003220 4.7e-13 78.2 93 45.2
Aa31LG1G4070 Aethionema arabicum HOM05D001366 ORTHO05D003220 6.2e-13 77.8 93 45.2
CAN.G447.9 Capsicum annuum HOM05D001366 ORTHO05D003220 6.2e-13 77.8 104 40.4
COL.COLO4_24234 Corchorus olitorius HOM05D001366 ORTHO05D003220 6.2e-13 77.8 93 45.2
Phvul.003G062900 Phaseolus vulgaris HOM05D001366 ORTHO05D003220 6.2e-13 77.8 93 47.3
RcHm_v2.0_Chr7g0233791 Rosa chinensis HOM05D001366 ORTHO05D003220 6.2e-13 77.8 87 47.1
Atru.chr11.2087 Acer truncatum HOM05D001366 ORTHO05D003220 8.1e-13 77.4 93 45.2
MD16G1097800 Malus domestica HOM05D001366 ORTHO05D003220 8.1e-13 77.4 93 44.1
Medtr8g069760 Medicago truncatula HOM05D001366 ORTHO05D003220 8.1e-13 77.4 93 46.2
Nn4g22680 Nelumbo nucifera HOM05D001366 ORTHO05D003220 8.1e-13 77.4 93 45.2
CARHR010980 Cardamine hirsuta HOM05D001366 ORTHO05D003220 1.1e-12 77.0 93 45.2
Ciclev10030499m.g Citrus clementina HOM05D001366 ORTHO05D003220 1.1e-12 77.0 93 44.1
Lj4g0012667 Lotus japonicus HOM05D001366 ORTHO05D003220 1.1e-12 77.0 93 46.2
TPR.G23137 Trifolium pratense HOM05D001366 ORTHO05D003220 1.1e-12 77.0 93 44.1
Aqoxy3G02840 Aquilegia oxysepala HOM05D001366 ORTHO05D003220 1.4e-12 76.6 93 46.2
AL1G21690 Arabidopsis lyrata HOM05D001366 ORTHO05D003220 1.4e-12 76.6 93 45.2
AT1G10760 Arabidopsis thaliana HOM05D001366 ORTHO05D003220 1.4e-12 76.6 93 45.2
DCAR_007066 Daucus carota HOM05D001366 ORTHO05D003220 1.4e-12 76.6 93 44.1
Gohir.A12G144400 Gossypium hirsutum HOM05D001366 ORTHO05D003220 1.4e-12 76.6 93 44.1
Peaxi162Scf00515g00133 Petunia axillaris HOM05D001366 ORTHO05D003220 1.4e-12 76.6 104 40.4
Potri.008G188150 Populus trichocarpa HOM05D001366 ORTHO05D003220 1.4e-12 76.6 93 44.1
Sed0024840 Sechium edule HOM05D001366 ORTHO05D003220 1.4e-12 76.6 93 45.2
Sc04g0009380 Simmondsia chinensis HOM05D001366 ORTHO05D003220 1.4e-12 76.6 93 46.2
Ah.03g133220 Amaranthus hybridus HOM05D001366 ORTHO05D003220 1.8e-12 76.3 90 45.6
Duzib268G0758 Durio zibethinus HOM05D001366 ORTHO05D003220 1.8e-12 76.3 93 46.2
Gohir.D12G149000 Gossypium hirsutum HOM05D001366 ORTHO05D003220 1.8e-12 76.3 93 44.1
MD13G1096800 Malus domestica HOM05D001366 ORTHO05D003220 1.8e-12 76.3 93 43.0
Manes.13G026800 Manihot esculenta HOM05D001366 ORTHO05D003220 1.8e-12 76.3 93 43.0
Psat4g114240 Pisum sativum HOM05D001366 ORTHO05D003220 1.8e-12 76.3 93 44.1
Prupe.1G248900 Prunus persica HOM05D001366 ORTHO05D003220 1.8e-12 76.3 90 47.8
THA.LOC104823655 Tarenaya hassleriana HOM05D001366 ORTHO05D003220 1.8e-12 76.3 93 43.0
TAR374G1700 Trochodendron aralioides HOM05D001366 ORTHO05D003220 1.8e-12 76.3 93 46.2
CiPaw.05G184800 Carya illinoinensis HOM05D001366 ORTHO05D003220 2.3e-12 75.9 93 43.0
ClCG05G025580 Citrullus lanatus HOM05D001366 ORTHO05D003220 2.3e-12 75.9 93 46.2
Haze_12225 Corylus avellana HOM05D001366 ORTHO05D003220 2.3e-12 75.9 93 43.0
MELO3C011972.2 Cucumis melo HOM05D001366 ORTHO05D003220 2.3e-12 75.9 93 44.1
DCAR_031129 Daucus carota HOM05D001366 ORTHO05D003220 2.3e-12 75.9 93 44.1
Dinv15253 Davidia involucrata HOM05D001366 ORTHO05D003220 2.3e-12 75.9 93 44.1
Gohir.A01G159900 Gossypium hirsutum HOM05D001366 ORTHO05D003220 2.3e-12 75.9 93 44.1
Sp1g09460 Schrenkiella parvula HOM05D001366 ORTHO05D003220 2.3e-12 75.9 93 43.0
Sed0006405 Sechium edule HOM05D001366 ORTHO05D003220 2.3e-12 75.9 93 46.2
SMO347G0598 Selaginella moellendorffii HOM05D001366 ORTHO05D003220 2.3e-12 75.9 104 41.3
PGSC0003DMG400007677 Solanum tuberosum HOM05D001366 ORTHO05D003220 2.3e-12 75.9 90 45.6
Carub.0001s1031 Capsella rubella HOM05D001366 ORTHO05D003220 3.1e-12 75.5 93 44.1
Ca_22500_v3 Cicer arietinum L. HOM05D001366 ORTHO05D003220 3.1e-12 75.5 93 43.0
Gorai.002G186200 Gossypium raimondii HOM05D001366 ORTHO05D003220 3.1e-12 75.5 90 44.4
MBI16_g14597_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D003220 3.1e-12 75.5 93 46.2
QL03p058693 Quercus lobata HOM05D001366 ORTHO05D003220 3.1e-12 75.5 93 45.2
BcaC07g38588 Brassica carinata HOM05D001366 ORTHO05D003220 4.0e-12 75.1 93 43.0
BcaC07g38627 Brassica carinata HOM05D001366 ORTHO05D003220 4.0e-12 75.1 93 43.0
A08p33790 Brassica napus HOM05D001366 ORTHO05D003220 4.0e-12 75.1 93 43.0
C08p13950 Brassica napus HOM05D001366 ORTHO05D003220 4.0e-12 75.1 93 43.0
BolC8t49029H Brassica oleracea HOM05D001366 ORTHO05D003220 4.0e-12 75.1 93 43.0
BraA08t35295Z Brassica rapa HOM05D001366 ORTHO05D003220 4.0e-12 75.1 93 43.0
CDE04G3560 Ceratophyllum demersum HOM05D001366 ORTHO05D003220 4.0e-12 75.1 93 43.0
Dinv24813 Davidia involucrata HOM05D001366 ORTHO05D003220 4.0e-12 75.1 90 44.4
Hma1.2p1_0223F.1_g094185 Hydrangea macrophylla HOM05D001366 ORTHO05D003220 4.0e-12 75.1 93 43.0
Lalb_Chr09g0334871 Lupinus albus HOM05D001366 ORTHO05D003220 4.0e-12 75.1 88 47.7
Sabra10G0023900 Salix brachista HOM05D001366 ORTHO05D003220 4.0e-12 75.1 93 43.0
Zm00001eb278140 Zea mays HOM05D001366 ORTHO05D003220 4.0e-12 75.1 90 45.6
FvH4_4g25800 Fragaria vesca HOM05D001366 ORTHO05D003220 5.2e-12 74.7 88 44.3
FAN12G2701 Fragaria x ananassa HOM05D001366 ORTHO05D003220 5.2e-12 74.7 88 44.3
FAN12G3618 Fragaria x ananassa HOM05D001366 ORTHO05D003220 5.2e-12 74.7 88 44.3
Glyma.08G283700 Glycine max HOM05D001366 ORTHO05D003220 5.2e-12 74.7 93 47.3
Gohir.D01G150200 Gossypium hirsutum HOM05D001366 ORTHO05D003220 5.2e-12 74.7 90 44.4
Lsat_1_v5_gn_8_153980 Lactuca sativa HOM05D001366 ORTHO05D003220 5.2e-12 74.7 90 44.4
Potri.010G044100 Populus trichocarpa HOM05D001366 ORTHO05D003220 5.2e-12 74.7 93 43.0
Rhsim12G0113000 Rhododendron simsii HOM05D001366 ORTHO05D003220 5.2e-12 74.7 93 43.0
Thecc.02G256300 Theobroma cacao HOM05D001366 ORTHO05D003220 5.2e-12 74.7 93 43.0
Ah.02g130140 Amaranthus hybridus HOM05D001366 ORTHO05D003220 6.8e-12 74.3 90 45.6
A09p64660 Brassica napus HOM05D001366 ORTHO05D003220 6.8e-12 74.3 93 44.1
C08p48530 Brassica napus HOM05D001366 ORTHO05D003220 6.8e-12 74.3 93 41.9
BolC8t52392H Brassica oleracea HOM05D001366 ORTHO05D003220 6.8e-12 74.3 93 44.1
BraA09t41826Z Brassica rapa HOM05D001366 ORTHO05D003220 6.8e-12 74.3 93 44.1
Thhalv10006565m.g Eutrema salsugineum HOM05D001366 ORTHO05D003220 6.8e-12 74.3 93 44.1
HanXRQChr12g0371851 Helianthus annuus HOM05D001366 ORTHO05D003220 6.8e-12 74.3 93 43.0
RcHm_v2.0_Chr4g0433251 Rosa chinensis HOM05D001366 ORTHO05D003220 6.8e-12 74.3 88 45.5
arahy.Tifrunner.gnm1.ann1.52KDTF Arachis hypogaea HOM05D001366 ORTHO05D003220 8.9e-12 73.9 100 41.0
arahy.Tifrunner.gnm1.ann1.N2L19B Arachis hypogaea HOM05D001366 ORTHO05D003220 8.9e-12 73.9 100 41.0
CANSAT01G0055 Cannabis sativa HOM05D001366 ORTHO05D003220 8.9e-12 73.9 93 43.0
ECA233G2601 Erigeron canadensis HOM05D001366 ORTHO05D003220 8.9e-12 73.9 93 43.0
Solyc05g005020.4 Solanum lycopersicum HOM05D001366 ORTHO05D003220 8.9e-12 73.9 90 44.4
Sopen05g001030 Solanum pennellii HOM05D001366 ORTHO05D003220 8.9e-12 73.9 90 44.4
SGA_v2.0_scaffold228G43260 Striga asiatica HOM05D001366 ORTHO05D003220 8.9e-12 73.9 90 46.7
TAR622G0036 Trochodendron aralioides HOM05D001366 ORTHO05D003220 8.9e-12 73.9 90 46.7
Actinidia15071 Actinidia chinensis HOM05D001366 ORTHO05D003220 1.2e-11 73.6 93 41.9
AagrBONN_evm.TU.Sc2ySwM_340.2092 Anthoceros agrestis HOM05D001366 ORTHO05D003220 1.2e-11 73.6 83 49.4
AagrBONN_evm.TU.Sc2ySwM_340.2093 Anthoceros agrestis HOM05D001366 ORTHO05D003220 1.2e-11 73.6 83 49.4
MSTRG.7915 Avicennia marina HOM05D001366 ORTHO05D003220 1.2e-11 73.6 90 47.8
Lsat_1_v5_gn_4_4920 Lactuca sativa HOM05D001366 ORTHO05D003220 1.2e-11 73.6 93 44.1
BcaB08g37373 Brassica carinata HOM05D001366 ORTHO05D003220 1.5e-11 73.2 93 43.0
FAN07G2766 Fragaria x ananassa HOM05D001366 ORTHO05D003220 1.5e-11 73.2 88 46.6
SalBow2G1604 Salvia bowleyana HOM05D001366 ORTHO05D003220 1.5e-11 73.2 90 45.6
CSS0021224 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D003220 2.0e-11 72.8 93 40.9
CSS0046721 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D003220 2.0e-11 72.8 93 40.9
AUR62005429 Chenopodium quinoa HOM05D001366 ORTHO05D003220 2.0e-11 72.8 90 43.3
AUR62014090 Chenopodium quinoa HOM05D001366 ORTHO05D003220 2.0e-11 72.8 90 43.3
HanXRQChr12g0384161 Helianthus annuus HOM05D001366 ORTHO05D003220 2.0e-11 72.8 93 45.2
vmacro01143 Vaccinium macrocarpon HOM05D001366 ORTHO05D003220 2.0e-11 72.8 93 41.9
Sabra08G0142500 Salix brachista HOM05D001366 ORTHO05D003220 2.6e-11 72.4 90 42.2
unitig_26.g10358 Utricularia gibba HOM05D001366 ORTHO05D003220 2.6e-11 72.4 90 45.6
vmacro16213 Vaccinium macrocarpon HOM05D001366 ORTHO05D003220 2.6e-11 72.4 88 45.5
GSVIVG01013806001 Vitis vinifera HOM05D001366 ORTHO05D003220 2.6e-11 72.4 90 42.2
Cpa.g.sc69.90 Carica papaya HOM05D001366 ORTHO05D003220 3.4e-11 72.0 90 44.4
Rhsim12G0042000 Rhododendron simsii HOM05D001366 ORTHO05D003220 3.4e-11 72.0 93 41.9
EL10Ac6g13726 Beta vulgaris HOM05D001366 ORTHO05D003220 4.4e-11 71.6 90 43.3
Os06g0498400 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D003220 5.8e-11 71.2 90 44.4
Migut.L01476 Erythranthe guttata HOM05D001366 ORTHO05D003220 7.5e-11 70.9 90 44.4
MSTRG.577 Avicennia marina HOM05D001366 ORTHO05D003220 1.3e-10 70.1 88 45.5
FAN22G0388 Fragaria x ananassa HOM05D001366 ORTHO05D003220 4.9e-10 68.2 82 46.3
MCO16G440 Micromonas commoda HOM05D001366 ORTHO05D003220 4.9e-10 68.2 97 40.2
Ciclev10017434m.g Citrus clementina HOM05D001366 ORTHO05D003220 8.3e-10 67.4 47 72.3
ECA234G4650 Erigeron canadensis HOM05D001366 ORTHO05D003220 1.9e-09 66.2 88 42.0
Gohir.A01G159950 Gossypium hirsutum HOM05D001366 ORTHO05D003220 5.1e-07 58.2 69 43.5
SEGI_12281 Sequoiadendron giganteum HOM05D001366 ORTHO05D003220 5.1e-07 58.2 43 67.4
FAN04G2482 Fragaria x ananassa HOM05D001366 ORTHO05D003220 1.5e-06 56.6 40 62.5
PRCOL_00000768 Prasinoderma coloniale HOM05D001366 ORTHO05D003220 1.5e-06 56.6 80 40.0


User provided reference genes

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