Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 2.7e-225 785.0 397 100.0
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 4.6e-177 624.8 362 88.4
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 6.4e-171 604.4 362 86.2
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 5.6e-167 591.3 360 85.6
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 4.8e-166 588.2 360 85.3
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 2.6e-148 529.3 364 75.0
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 2.2e-147 526.2 347 79.3
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 1.2e-145 520.4 360 73.9
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 3.0e-144 515.8 389 69.2
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 1.7e-142 510.0 359 73.0
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 1.2e-140 503.8 365 73.4
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 7.7e-140 501.1 361 70.6
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 1.0e-139 500.7 365 71.5
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 2.9e-139 499.2 361 72.0
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 5.0e-139 498.4 363 70.5
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 1.4e-138 496.9 361 70.9
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 2.1e-137 493.0 356 71.9
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 2.7e-137 492.7 339 73.2
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 3.9e-136 488.8 358 71.5
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 7.4e-135 484.6 359 71.3
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 1.7e-134 483.4 365 69.0
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 2.4e-133 479.6 364 69.5
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 1.5e-132 476.9 310 78.4
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 2.0e-132 476.5 361 70.6
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 1.0e-131 474.2 310 78.1
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 1.9e-130 469.9 353 71.4
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 2.5e-130 469.5 301 78.1
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 2.1e-129 466.5 372 65.6
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 6.7e-128 461.5 356 65.7
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 1.1e-127 460.7 362 66.3
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 1.1e-127 460.7 364 66.5
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 3.3e-127 459.1 381 66.1
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 3.3e-127 459.1 333 70.0
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 4.4e-127 458.8 360 68.1
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.3e-126 457.2 397 64.0
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 2.2e-126 456.4 368 65.5
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 3.7e-126 455.7 364 65.4
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 4.8e-126 455.3 311 74.0
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 6.3e-126 454.9 362 66.9
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 6.3e-126 454.9 292 76.7
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 1.1e-125 454.1 344 68.6
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 1.1e-125 454.1 301 75.7
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 1.1e-125 454.1 361 67.0
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 1.8e-125 453.4 324 71.0
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 2.4e-125 453.0 309 72.8
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 2.4e-125 453.0 290 76.2
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 3.1e-125 452.6 359 67.1
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 3.1e-125 452.6 342 67.8
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 5.3e-125 451.8 356 67.7
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 5.3e-125 451.8 323 70.6
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 7.0e-125 451.4 302 73.8
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 9.1e-125 451.1 363 65.6
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 9.1e-125 451.1 315 72.4
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 1.2e-124 450.7 317 71.9
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 1.6e-124 450.3 344 68.6
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 2.0e-124 449.9 363 65.3
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 3.5e-124 449.1 353 66.0
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 3.5e-124 449.1 363 65.3
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 4.5e-124 448.7 315 71.1
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 4.5e-124 448.7 303 73.3
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 1.3e-123 447.2 330 70.0
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 1.7e-123 446.8 315 71.1
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 1.7e-123 446.8 367 63.8
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 2.9e-123 446.0 287 76.3
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 8.5e-123 444.5 315 70.8
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 8.5e-123 444.5 315 70.8
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 1.1e-122 444.1 298 73.5
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 1.5e-122 443.7 335 67.5
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 1.9e-122 443.4 335 67.5
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 2.5e-122 443.0 360 64.2
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 2.7e-121 439.5 315 70.5
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 1.2e-119 434.1 401 60.6
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 1.1e-117 427.6 340 67.4
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 3.1e-117 426.0 342 66.1
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 3.1e-117 426.0 329 68.1
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 7.0e-117 424.9 307 68.7
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 2.7e-116 422.9 264 79.9
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.0e-115 421.0 302 71.9
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 1.2e-113 414.1 344 66.3
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 8.8e-112 407.9 360 61.1
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 2.0e-111 406.8 418 56.9
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 3.4e-111 406.0 315 66.3
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 9.8e-111 404.4 360 61.7
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 7.0e-109 398.3 279 71.7
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 1.3e-107 394.0 322 61.5
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 1.2e-103 380.9 608 41.3
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 8.3e-102 374.8 265 69.1
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 1.1e-101 374.4 273 71.1
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 4.1e-101 372.5 460 47.6
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 1.2e-97 360.9 452 46.5
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 5.2e-96 355.5 272 69.1
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 3.4e-95 352.8 281 67.6
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 2.9e-94 349.7 287 62.0
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 6.4e-94 348.6 232 72.0
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 1.9e-93 347.1 276 67.4
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 2.4e-93 346.7 232 72.0
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 1.3e-91 340.9 390 54.1
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 1.9e-90 337.0 295 58.3
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.5e-87 327.4 287 57.8
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 2.6e-87 326.6 284 56.7
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 1.7e-86 323.9 301 56.5
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 6.4e-78 295.4 184 77.7
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 5.3e-64 249.2 360 45.6
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.4e-61 241.1 210 65.7
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 2.1e-60 237.3 213 57.7
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 3.5e-60 236.5 302 45.0
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 5.1e-59 232.6 142 77.5
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 8.7e-59 231.9 170 65.3
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 2.1e-57 227.3 200 60.5
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 7.4e-50 202.2 198 55.1
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 1.3e-49 201.4 193 51.8
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 2.1e-49 200.7 299 40.1
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 3.8e-38 163.3 210 45.2
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 7.4e-34 149.1 96 76.0
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 1.3e-33 148.3 209 41.1
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 1.7e-30 137.9 104 63.5
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 1.3e-25 121.7 84 70.2
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 2.8e-25 120.6 82 70.7
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 3.4e-23 113.6 90 63.3
Ca_02074_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.9e-21 107.8 130 56.9
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 5.7e-18 96.3 77 57.1
Potri.002G030701 Populus trichocarpa HOM05D001587 ORTHO05D014867 1.3e-17 95.1 108 52.8
CARHR293210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 4.8e-17 93.2 64 73.4
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 4.1e-16 90.1 154 36.4
CSS0001111 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 5.3e-16 89.7 58 75.9
CSS0020626 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 5.3e-16 89.7 58 75.9
CSS0029664 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 5.3e-16 89.7 58 75.9
CSS0031048 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 5.3e-16 89.7 58 75.9
CSS0048350 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 5.3e-16 89.7 58 75.9
CSS0016398 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 7.0e-16 89.4 58 75.9
CSS0046073 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.0e-15 87.8 58 74.1
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 3.5e-15 87.0 77 58.4
CSS0002416 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.0e-14 85.5 58 74.1
Sabra02G0024500 Salix brachista HOM05D001587 ORTHO05D037360 4.5e-07 60.1 38 71.1


User provided reference genes

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