Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 3.8e-235 817.8 407 100.0
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 4.0e-192 674.9 411 79.1
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.4e-191 671.8 411 78.8
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 5.6e-186 654.4 416 78.6
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 7.3e-186 654.1 416 78.4
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.2e-183 646.7 410 76.6
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 1.2e-183 646.7 412 77.4
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 2.3e-179 632.5 414 76.3
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 3.0e-179 632.1 414 76.3
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 3.9e-179 631.7 414 76.3
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 2.5e-178 629.0 411 75.9
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 3.3e-178 628.6 411 75.7
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 2.1e-177 625.9 416 74.0
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 2.9e-174 615.5 416 75.0
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 6.0e-172 607.8 414 73.9
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 7.3e-170 600.9 420 73.1
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 9.5e-170 600.5 413 73.4
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 6.2e-169 597.8 420 74.0
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.4e-168 596.7 420 72.6
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.8e-168 596.3 420 72.6
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 1.2e-167 593.6 423 71.4
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 1.2e-167 593.6 422 72.3
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 7.5e-167 590.9 416 71.6
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 9.9e-167 590.5 425 69.6
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.3e-166 590.1 407 72.5
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 2.2e-166 589.3 414 72.2
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 6.4e-166 587.8 415 72.5
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 8.3e-166 587.4 429 70.9
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.1e-165 587.0 423 70.7
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 1.1e-165 587.0 410 71.2
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.9e-165 586.3 429 71.1
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 9.2e-165 583.9 443 68.8
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 9.2e-165 583.9 418 70.8
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 1.2e-164 583.6 415 73.5
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 3.5e-164 582.0 419 71.1
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 3.5e-164 582.0 414 71.5
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 7.8e-164 580.9 419 71.1
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 1.7e-163 579.7 420 70.0
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 1.7e-163 579.7 423 69.5
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 3.0e-163 578.9 425 70.1
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 5.1e-163 578.2 424 69.8
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 8.6e-163 577.4 419 70.9
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.5e-162 576.6 419 71.1
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.5e-162 576.6 412 69.9
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 1.5e-162 576.6 412 70.1
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 3.3e-162 575.5 419 70.9
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 9.5e-162 573.9 410 72.2
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 9.5e-162 573.9 410 72.4
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 4.7e-161 571.6 414 69.8
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 8.1e-161 570.9 410 69.5
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 1.4e-160 570.1 411 69.6
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 5.2e-160 568.2 407 70.0
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 1.5e-159 566.6 407 70.3
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 7.6e-159 564.3 423 69.3
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 9.9e-159 563.9 407 69.8
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 4.9e-158 561.6 410 69.8
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 1.1e-157 560.5 418 69.4
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 1.4e-157 560.1 412 69.7
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 2.4e-157 559.3 421 67.5
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 5.1e-155 551.6 407 68.3
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 5.1e-155 551.6 407 68.3
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 1.1e-154 550.4 407 68.3
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.1e-153 546.2 406 69.2
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.2e-151 540.4 418 66.5
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 1.5e-151 540.0 420 65.0
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 3.4e-151 538.9 420 65.7
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 5.8e-151 538.1 379 72.0
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 7.6e-151 537.7 411 67.6
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 2.9e-150 535.8 420 64.5
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 2.9e-150 535.8 421 64.6
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 9.3e-149 530.8 421 64.1
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 9.3e-149 530.8 422 64.5
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 2.1e-148 529.6 420 64.3
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.7e-147 526.6 420 64.0
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 3.9e-147 525.4 417 64.5
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 3.9e-147 525.4 417 64.5
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 3.9e-147 525.4 417 64.5
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 5.1e-147 525.0 406 69.0
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 8.7e-147 524.2 421 63.9
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 1.5e-146 523.5 421 63.7
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 4.8e-145 518.5 419 64.2
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 2.4e-144 516.2 408 65.7
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 9.9e-143 510.8 407 66.1
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 2.2e-142 509.6 416 65.4
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 2.4e-141 506.1 424 63.0
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 3.2e-141 505.8 408 65.7
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 3.2e-141 505.8 409 65.5
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 1.2e-140 503.8 417 64.3
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 6.0e-140 501.5 403 66.5
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.8e-139 500.0 423 62.2
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 2.5e-138 496.1 420 62.4
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 9.6e-138 494.2 473 57.5
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 1.2e-132 477.2 411 61.8
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.6e-132 476.9 366 67.5
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 3.0e-123 446.0 409 59.7
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 4.5e-119 432.2 256 83.2
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 5.9e-119 431.8 461 50.8
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 5.1e-115 418.7 270 77.4
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 3.2e-109 399.4 296 71.3
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 5.5e-109 398.7 258 78.7
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 2.8e-105 386.3 269 73.6
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 2.9e-102 376.3 418 50.2
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 5.5e-101 372.1 290 68.3
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 1.6e-100 370.5 472 43.9
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.4e-99 367.5 246 76.8
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 2.6e-95 353.2 413 49.2
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 6.5e-94 348.6 469 43.5
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 4.4e-82 309.3 440 41.4
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 5.9e-71 272.3 187 73.8
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 2.1e-47 194.1 172 56.4
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 4.2e-40 169.9 196 53.6
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 8.7e-38 162.2 496 27.4
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 2.1e-36 157.5 176 50.0
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 1.2e-34 151.8 479 28.4
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 4.4e-34 149.8 160 51.9
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 3.8e-33 146.7 460 28.5
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 2.6e-26 124.0 108 60.2
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 1.1e-21 108.6 98 60.2
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 5.3e-19 99.8 70 68.6
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 1.8e-14 84.7 113 42.5


User provided reference genes

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