Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44246 Davidia involucrata HOM05D001529 ORTHO05D030818 5.9e-45 183.7 87 100.0
Lj3C1050G12 Lonicera japonica HOM05D001529 ORTHO05D003309 1.1e-17 93.2 83 61.4
Actinidia15027 Actinidia chinensis HOM05D001529 ORTHO05D030818 3.1e-17 91.7 77 64.9
CSS0022154 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D003309 5.2e-17 90.9 71 69.0
Dinv24886 Davidia involucrata HOM05D001529 ORTHO05D003309 2.0e-16 89.0 59 76.3
Actinidia32590 Actinidia chinensis HOM05D001529 ORTHO05D003309 1.1e-14 83.2 59 72.9
Lsat_1_v5_gn_4_7120 Lactuca sativa HOM05D001529 ORTHO05D003309 6.0e-13 77.4 59 66.1
HanXRQChr12g0383391 Helianthus annuus HOM05D001529 ORTHO05D003309 1.1e-11 73.2 67 58.2
vmacro01189 Vaccinium macrocarpon HOM05D001529 ORTHO05D003309 1.1e-11 73.2 60 61.7
CSS0025151 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D003309 2.5e-11 72.0 59 62.7
Cfa006930 Carpinus fangiana HOM05D001529 ORTHO05D003309 3.3e-11 71.6 91 49.5
Cfa009117 Carpinus fangiana HOM05D001529 ORTHO05D003309 3.3e-11 71.6 91 49.5
DCAR_007098 Daucus carota HOM05D001529 ORTHO05D003309 3.3e-11 71.6 60 61.7
ECA234G4010 Erigeron canadensis HOM05D001529 ORTHO05D003309 7.3e-11 70.5 70 58.6
vmacro12521 Vaccinium macrocarpon HOM05D001529 ORTHO05D003309 7.3e-11 70.5 60 60.0
MD13G1089000 Malus domestica HOM05D001529 ORTHO05D003309 1.3e-10 69.7 71 53.5
Actinidia01712 Actinidia chinensis HOM05D001529 ORTHO05D003309 2.8e-10 68.6 74 55.4
Rhsim12G0048100 Rhododendron simsii HOM05D001529 ORTHO05D003309 3.6e-10 68.2 71 56.3
GSVIVG01020206001 Vitis vinifera HOM05D001529 ORTHO05D003309 4.8e-10 67.8 59 57.6
Carub.0006s2450 Capsella rubella HOM05D001529 ORTHO05D003309 6.2e-10 67.4 71 53.5
Haze_12153 Corylus avellana HOM05D001529 ORTHO05D003309 6.2e-10 67.4 77 53.2
Eucgr.B03357 Eucalyptus grandis HOM05D001529 ORTHO05D003309 6.2e-10 67.4 43 79.1
GSVIVG01014680001 Vitis vinifera HOM05D001529 ORTHO05D003309 6.2e-10 67.4 59 55.9
BraA06t26631Z Brassica rapa HOM05D001529 ORTHO05D003309 1.1e-09 66.6 72 50.0
HanXRQChr15g0469351 Helianthus annuus HOM05D001529 ORTHO05D003309 1.1e-09 66.6 41 75.6
MD16G1089100 Malus domestica HOM05D001529 ORTHO05D003309 1.1e-09 66.6 44 70.5
CANSAT01G1270 Cannabis sativa HOM05D001529 ORTHO05D003309 1.8e-09 65.9 73 52.1
Ah.01g012480 Amaranthus hybridus HOM05D001529 ORTHO05D003309 2.4e-09 65.5 58 60.3
CiPaw.06G073200 Carya illinoinensis HOM05D001529 ORTHO05D003309 2.4e-09 65.5 43 74.4
HanXRQChr17g0544291 Helianthus annuus HOM05D001529 ORTHO05D003309 2.4e-09 65.5 40 77.5
ATR1149G120 Amborella trichopoda HOM05D001529 ORTHO05D003309 3.1e-09 65.1 64 54.7
Nn5g28174 Nelumbo nucifera HOM05D001529 ORTHO05D003309 3.1e-09 65.1 47 66.0
RcHm_v2.0_Chr4g0400731 Rosa chinensis HOM05D001529 ORTHO05D003309 3.1e-09 65.1 74 47.3
Atru.chr11.1993 Acer truncatum HOM05D001529 ORTHO05D003309 4.0e-09 64.7 76 48.7
A06p37060 Brassica napus HOM05D001529 ORTHO05D003309 4.0e-09 64.7 72 50.0
SGA_v2.0_scaffold43G16337 Striga asiatica HOM05D001529 ORTHO05D003309 4.0e-09 64.7 67 53.7
BcaNung03917 Brassica carinata HOM05D001529 ORTHO05D003309 6.9e-09 63.9 69 50.7
Nitab4.5_0000052g0290 Nicotiana tabacum HOM05D001529 ORTHO05D003309 6.9e-09 63.9 69 52.2
EL10Ac9g22967 Beta vulgaris HOM05D001529 ORTHO05D003309 9.0e-09 63.5 49 67.3
TAR629G2761 Trochodendron aralioides HOM05D001529 ORTHO05D003309 9.0e-09 63.5 47 61.7
C07p41380 Brassica napus HOM05D001529 ORTHO05D003309 1.2e-08 63.2 69 50.7
CARHR018670 Cardamine hirsuta HOM05D001529 ORTHO05D003309 1.2e-08 63.2 47 66.0
ECA240G3521 Erigeron canadensis HOM05D001529 ORTHO05D003309 1.2e-08 63.2 43 65.1
Nitab4.5_0002198g0010 Nicotiana tabacum HOM05D001529 ORTHO05D003309 1.2e-08 63.2 69 52.2
Prupe.1G256800 Prunus persica HOM05D001529 ORTHO05D003309 1.2e-08 63.2 66 50.0
TWI36G0528 Tripterygium wilfordii HOM05D001529 ORTHO05D003309 2.0e-08 62.4 50 62.0
AL6G38710 Arabidopsis lyrata HOM05D001529 ORTHO05D003309 3.4e-08 61.6 74 50.0
FvH4_4g07690 Fragaria vesca HOM05D001529 ORTHO05D003309 3.4e-08 61.6 70 48.6
Lsat_1_v5_gn_4_126221 Lactuca sativa HOM05D001529 ORTHO05D003309 3.4e-08 61.6 41 70.7
TWI18G0452 Tripterygium wilfordii HOM05D001529 ORTHO05D003309 3.4e-08 61.6 60 51.7
Aa31LG7G7800 Aethionema arabicum HOM05D001529 ORTHO05D003309 4.4e-08 61.2 65 52.3
CARHR186700 Cardamine hirsuta HOM05D001529 ORTHO05D003309 4.4e-08 61.2 71 52.1
FAN12G3914 Fragaria x ananassa HOM05D001529 ORTHO05D003309 4.4e-08 61.2 70 48.6
HPP92_003859 Vanilla planifolia HOM05D001529 ORTHO05D003309 4.4e-08 61.2 81 48.1
AT5G26830 Arabidopsis thaliana HOM05D001529 ORTHO05D003309 5.8e-08 60.8 72 47.2
BolC7t44668H Brassica oleracea HOM05D001529 ORTHO05D003309 5.8e-08 60.8 69 49.3
Peaxi162Scf00445g01023 Petunia axillaris HOM05D001529 ORTHO05D003309 5.8e-08 60.8 71 50.7
BcaNung03670 Brassica carinata HOM05D001529 ORTHO05D003309 7.6e-08 60.5 45 64.4
Thhalv10003725m.g Eutrema salsugineum HOM05D001529 ORTHO05D003309 7.6e-08 60.5 50 60.0
Potri.010G096550 Populus trichocarpa HOM05D001529 ORTHO05D003309 7.6e-08 60.5 70 50.0
QL03p061952 Quercus lobata HOM05D001529 ORTHO05D003309 7.6e-08 60.5 73 49.3
Sp2g21160 Schrenkiella parvula HOM05D001529 ORTHO05D003309 7.6e-08 60.5 80 46.2
FAN22G1261 Fragaria x ananassa HOM05D001529 ORTHO05D003309 1.3e-07 59.7 70 45.7
THA.LOC104808916 Tarenaya hassleriana HOM05D001529 ORTHO05D003309 1.3e-07 59.7 61 55.7
CiPaw.05G147900 Carya illinoinensis HOM05D001529 ORTHO05D003309 1.7e-07 59.3 46 63.0
Nitab4.5_0000059g0050 Nicotiana tabacum HOM05D001529 ORTHO05D003309 1.7e-07 59.3 60 56.7
THA.LOC104822129 Tarenaya hassleriana HOM05D001529 ORTHO05D003309 1.7e-07 59.3 54 57.4
Ciclev10030825m.g Citrus clementina HOM05D001529 ORTHO05D003309 2.2e-07 58.9 52 55.8
QL04p002241 Quercus lobata HOM05D001529 ORTHO05D003309 2.2e-07 58.9 73 49.3
QL09p007109 Quercus lobata HOM05D001529 ORTHO05D003309 2.2e-07 58.9 73 49.3
QL12p012873 Quercus lobata HOM05D001529 ORTHO05D003309 2.2e-07 58.9 73 49.3
AT1G17960 Arabidopsis thaliana HOM05D001529 ORTHO05D003309 3.8e-07 58.2 45 68.9
Cpa.g.sc642.1 Carica papaya HOM05D001529 ORTHO05D003309 3.8e-07 58.2 43 62.8
Sopen05g001810 Solanum pennellii HOM05D001529 ORTHO05D003309 3.8e-07 58.2 79 50.6
Duzib248G1216 Durio zibethinus HOM05D001529 ORTHO05D003309 4.9e-07 57.8 43 62.8
VMungo1215G0655 Vigna mungo HOM05D001529 ORTHO05D003309 4.9e-07 57.8 71 45.1
AL1G30320 Arabidopsis lyrata HOM05D001529 ORTHO05D003309 6.4e-07 57.4 45 66.7
arahy.Tifrunner.gnm1.ann1.GD50BS Arachis hypogaea HOM05D001529 ORTHO05D003309 6.4e-07 57.4 70 44.3
Manes.05G088800 Manihot esculenta HOM05D001529 ORTHO05D003309 8.4e-07 57.0 56 57.1
Oeu022552.3 Olea europaea HOM05D001529 ORTHO05D003309 8.4e-07 57.0 65 47.7
Phvul.002G072800 Phaseolus vulgaris HOM05D001529 ORTHO05D003309 8.4e-07 57.0 71 43.7
PGR102G2790 Punica granatum HOM05D001529 ORTHO05D003309 8.4e-07 57.0 48 60.4
BcaB04g19710 Brassica carinata HOM05D001529 ORTHO05D003309 1.1e-06 56.6 82 43.9
SalBow4G1852 Salvia bowleyana HOM05D001529 ORTHO05D003309 1.1e-06 56.6 67 49.3
Solyc05g005800.4 Solanum lycopersicum HOM05D001529 ORTHO05D003309 1.1e-06 56.6 79 49.4
Carub.0001s1766 Capsella rubella HOM05D001529 ORTHO05D003309 1.4e-06 56.2 45 64.4
MSTRG.8760 Avicennia marina HOM05D001529 ORTHO05D003309 1.9e-06 55.8 51 58.8
C09p06250 Brassica napus HOM05D001529 ORTHO05D003309 1.9e-06 55.8 48 56.2
BolC9t53545H Brassica oleracea HOM05D001529 ORTHO05D003309 1.9e-06 55.8 48 56.2
CDE05G2747 Ceratophyllum demersum HOM05D001529 ORTHO05D003309 1.9e-06 55.8 48 50.0
FAN17G1607 Fragaria x ananassa HOM05D001529 ORTHO05D003309 1.9e-06 55.8 44 59.1
Glyma.02G032800 Glycine max HOM05D001529 ORTHO05D003309 1.9e-06 55.8 55 54.5
Thecc.02G246500 Theobroma cacao HOM05D001529 ORTHO05D003309 1.9e-06 55.8 78 44.9
BraA09t36206Z Brassica rapa HOM05D001529 ORTHO05D003309 2.4e-06 55.5 65 46.2
CAN.G205.14 Capsicum annuum HOM05D001529 ORTHO05D003309 2.4e-06 55.5 61 50.8
FAN07G2211 Fragaria x ananassa HOM05D001529 ORTHO05D003309 2.4e-06 55.5 44 56.8
Potri.008G145600 Populus trichocarpa HOM05D001529 ORTHO05D003309 2.4e-06 55.5 75 45.3
Ca_04612_v3 Cicer arietinum L. HOM05D001529 ORTHO05D003309 3.2e-06 55.1 55 52.7
Glyma.01G032500 Glycine max HOM05D001529 ORTHO05D003309 3.2e-06 55.1 43 58.1
Gohir.A12G053900 Gossypium hirsutum HOM05D001529 ORTHO05D003309 3.2e-06 55.1 55 54.5
Oeu062773.1 Olea europaea HOM05D001529 ORTHO05D003309 3.2e-06 55.1 65 47.7
TPR.G22057 Trifolium pratense HOM05D001529 ORTHO05D003309 3.2e-06 55.1 55 50.9
CDE05G0810 Ceratophyllum demersum HOM05D001529 ORTHO05D003309 4.2e-06 54.7 48 47.9
AUR62032963 Chenopodium quinoa HOM05D001529 ORTHO05D003309 4.2e-06 54.7 61 47.5
MBI04_g06583_MAGBIO Magnolia biondii HOM05D001529 ORTHO05D003309 4.2e-06 54.7 43 58.1
Psat2g107000 Pisum sativum HOM05D001529 ORTHO05D003309 4.2e-06 54.7 71 40.8
SEGI_40352 Sequoiadendron giganteum HOM05D001529 ORTHO05D003309 4.2e-06 54.7 61 47.5
TAR629G0063 Trochodendron aralioides HOM05D001529 ORTHO05D030818 4.2e-06 54.7 65 52.3
Migut.F00372 Erythranthe guttata HOM05D001529 ORTHO05D003309 5.4e-06 54.3 52 53.8
Gohir.D12G050400 Gossypium hirsutum HOM05D001529 ORTHO05D003309 5.4e-06 54.3 55 52.7
Gorai.008G053600 Gossypium raimondii HOM05D001529 ORTHO05D003309 5.4e-06 54.3 55 52.7
arahy.Tifrunner.gnm1.ann1.WGVK9W Arachis hypogaea HOM05D001529 ORTHO05D003309 7.1e-06 53.9 70 42.9
SGA_v2.0_scaffold232G43521 Striga asiatica HOM05D001529 ORTHO05D003309 7.1e-06 53.9 62 48.4
CAN.G195.27 Capsicum annuum HOM05D001529 ORTHO05D003309 9.3e-06 53.5 43 58.1
Duzib268G0961 Durio zibethinus HOM05D001529 ORTHO05D003309 9.3e-06 53.5 55 52.7
Hund08612 Selenicereus undatus HOM05D001529 ORTHO05D003309 9.3e-06 53.5 72 44.4


User provided reference genes

Program Settings