Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44189 Davidia involucrata HOM05D000510 ORTHO05D006942 4.4e-42 174.1 81 100.0
Actinidia11302 Actinidia chinensis HOM05D000510 ORTHO05D006942 1.4e-19 99.4 65 67.7
Actinidia39849 Actinidia chinensis HOM05D000510 ORTHO05D006942 1.8e-19 99.0 65 67.7
QL10p048845 Quercus lobata HOM05D000510 ORTHO05D006942 2.3e-19 98.6 58 77.6
Cfa015170 Carpinus fangiana HOM05D000510 ORTHO05D006942 4.0e-19 97.8 58 75.9
Haze_01505 Corylus avellana HOM05D000510 ORTHO05D006942 4.0e-19 97.8 58 75.9
Atru.chr3.1485 Acer truncatum HOM05D000510 ORTHO05D006942 6.8e-19 97.1 58 74.1
ClCG07G015670 Citrullus lanatus HOM05D000510 ORTHO05D006942 6.8e-19 97.1 58 72.4
Cc03_g12920 Coffea canephora HOM05D000510 ORTHO05D006942 6.8e-19 97.1 65 67.7
MELO3C017714.2 Cucumis melo HOM05D000510 ORTHO05D006942 6.8e-19 97.1 58 72.4
CsaV3_4G003440 Cucumis sativus L. HOM05D000510 ORTHO05D006942 6.8e-19 97.1 58 72.4
Duzib268G1091 Durio zibethinus HOM05D000510 ORTHO05D006942 8.9e-19 96.7 58 72.4
Thecc.04G179600 Theobroma cacao HOM05D000510 ORTHO05D006942 8.9e-19 96.7 58 74.1
Lalb_Chr24g0396841 Lupinus albus HOM05D000510 ORTHO05D006942 1.2e-18 96.3 65 66.2
CiPaw.01G100000 Carya illinoinensis HOM05D000510 ORTHO05D006942 1.5e-18 95.9 58 74.1
Lj6C53G4 Lonicera japonica HOM05D000510 ORTHO05D006942 1.5e-18 95.9 58 72.4
Rhsim02G0077100 Rhododendron simsii HOM05D000510 ORTHO05D006942 1.5e-18 95.9 65 66.2
Gohir.A10G137500 Gossypium hirsutum HOM05D000510 ORTHO05D006942 2.0e-18 95.5 58 72.4
Gohir.D10G129101 Gossypium hirsutum HOM05D000510 ORTHO05D006942 2.0e-18 95.5 58 72.4
Gorai.011G142500 Gossypium raimondii HOM05D000510 ORTHO05D006942 2.0e-18 95.5 58 72.4
GSVIVG01010759001 Vitis vinifera HOM05D000510 ORTHO05D006942 2.0e-18 95.5 58 74.1
Cpa.g.sc9.282 Carica papaya HOM05D000510 ORTHO05D006942 2.6e-18 95.1 58 72.4
Ciclev10018759m.g Citrus clementina HOM05D000510 ORTHO05D006942 2.6e-18 95.1 58 72.4
COL.COLO4_07666 Corchorus olitorius HOM05D000510 ORTHO05D006942 2.6e-18 95.1 61 70.5
Duzib151G0818 Durio zibethinus HOM05D000510 ORTHO05D006942 3.4e-18 94.7 61 68.9
Oeu012284.1 Olea europaea HOM05D000510 ORTHO05D006942 3.4e-18 94.7 58 72.4
TWI63G1594 Tripterygium wilfordii HOM05D000510 ORTHO05D006942 5.8e-18 94.0 58 70.7
Peaxi162Scf00126g00012 Petunia axillaris HOM05D000510 ORTHO05D006942 7.5e-18 93.6 58 74.1
Lalb_Chr14g0372471 Lupinus albus HOM05D000510 ORTHO05D006942 9.8e-18 93.2 65 64.6
Sed0007298 Sechium edule HOM05D000510 ORTHO05D006942 1.3e-17 92.8 58 69.0
Solyc11g044940.1 Solanum lycopersicum HOM05D000510 ORTHO05D006942 1.3e-17 92.8 58 72.4
Sopen11g020450 Solanum pennellii HOM05D000510 ORTHO05D006942 1.3e-17 92.8 58 72.4
PGSC0003DMG400006667 Solanum tuberosum HOM05D000510 ORTHO05D006942 1.3e-17 92.8 58 72.4
CAN.G451.1 Capsicum annuum HOM05D000510 ORTHO05D006942 1.7e-17 92.4 58 72.4
Nitab4.5_0002474g0030 Nicotiana tabacum HOM05D000510 ORTHO05D006942 2.2e-17 92.0 58 70.7
Nitab4.5_0004047g0060 Nicotiana tabacum HOM05D000510 ORTHO05D006942 2.2e-17 92.0 58 70.7
Oeu055655.1 Olea europaea HOM05D000510 ORTHO05D006942 2.2e-17 92.0 58 70.7
Thhalv10005780m.g Eutrema salsugineum HOM05D000510 ORTHO05D006942 2.9e-17 91.7 55 70.9
RcHm_v2.0_Chr4g0406691 Rosa chinensis HOM05D000510 ORTHO05D006942 2.9e-17 91.7 58 69.0
Sed0016530 Sechium edule HOM05D000510 ORTHO05D006942 2.9e-17 91.7 58 65.5
FvH4_4g10810 Fragaria vesca HOM05D000510 ORTHO05D006942 3.7e-17 91.3 58 69.0
FAN07G1914 Fragaria x ananassa HOM05D000510 ORTHO05D006942 3.7e-17 91.3 58 69.0
FAN12G3624 Fragaria x ananassa HOM05D000510 ORTHO05D006942 3.7e-17 91.3 58 69.0
FAN17G2837 Fragaria x ananassa HOM05D000510 ORTHO05D006942 3.7e-17 91.3 58 69.0
Lj3g0024373 Lotus japonicus HOM05D000510 ORTHO05D006942 3.7e-17 91.3 65 60.0
Sp5g03720 Schrenkiella parvula HOM05D000510 ORTHO05D006942 3.7e-17 91.3 55 70.9
Sc13g0006770 Simmondsia chinensis HOM05D000510 ORTHO05D006942 3.7e-17 91.3 60 68.3
Aa31LG1G25120 Aethionema arabicum HOM05D009929 ORTHO05D006942 4.9e-17 90.9 55 69.1
arahy.Tifrunner.gnm1.ann1.HN1IYU Arachis hypogaea HOM05D000510 ORTHO05D006942 4.9e-17 90.9 72 58.3
arahy.Tifrunner.gnm1.ann1.Z5KWA0 Arachis hypogaea HOM05D000510 ORTHO05D006942 4.9e-17 90.9 72 58.3
BcaC07g40283 Brassica carinata HOM05D000510 ORTHO05D006942 4.9e-17 90.9 52 73.1
A09p51700 Brassica napus HOM05D000510 ORTHO05D006942 4.9e-17 90.9 52 73.1
C08p34430 Brassica napus HOM05D000510 ORTHO05D006942 4.9e-17 90.9 52 73.1
BolC8t51044H Brassica oleracea HOM05D000510 ORTHO05D006942 4.9e-17 90.9 52 73.1
BraA09t40606Z Brassica rapa HOM05D000510 ORTHO05D006942 4.9e-17 90.9 52 73.1
MD04G1040500 Malus domestica HOM05D000510 ORTHO05D006942 4.9e-17 90.9 58 67.2
Manes.11G120900 Manihot esculenta HOM05D000510 ORTHO05D006942 4.9e-17 90.9 58 69.0
Aa31LG10G13780 Aethionema arabicum HOM05D000510 ORTHO05D006942 1.1e-16 89.7 60 66.7
Glyma.13G344400 Glycine max HOM05D000510 ORTHO05D006942 1.1e-16 89.7 58 65.5
Glyma.15G030000 Glycine max HOM05D000510 ORTHO05D006942 1.1e-16 89.7 58 65.5
Prupe.1G194300 Prunus persica HOM05D000510 ORTHO05D006942 1.1e-16 89.7 58 67.2
VMungo1080G1377 Vigna mungo HOM05D000510 ORTHO05D006942 1.1e-16 89.7 60 63.3
CARHR169820 Cardamine hirsuta HOM05D000510 ORTHO05D006942 1.4e-16 89.4 63 63.5
Psat7g214960 Pisum sativum HOM05D000510 ORTHO05D006942 1.4e-16 89.4 55 69.1
CSS0000147 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D006942 1.9e-16 89.0 55 72.7
CSS0036325 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D006942 1.9e-16 89.0 55 72.7
CANSAT78G1007 Cannabis sativa HOM05D000510 ORTHO05D006942 1.9e-16 89.0 55 69.1
Glyma.12G052300 Glycine max HOM05D000510 ORTHO05D006942 2.4e-16 88.6 55 69.1
THA.LOC104803720 Tarenaya hassleriana HOM05D000510 ORTHO05D006942 2.4e-16 88.6 63 65.1
Glyma.11G127700 Glycine max HOM05D000510 ORTHO05D006942 3.2e-16 88.2 55 69.1
Oeu008316.1 Olea europaea HOM05D000510 ORTHO05D006942 3.2e-16 88.2 58 65.5
Carub.0005s2616 Capsella rubella HOM05D000510 ORTHO05D006942 4.1e-16 87.8 52 71.2
CDE08G0362 Ceratophyllum demersum HOM05D000510 ORTHO05D006942 4.1e-16 87.8 63 57.1
DCAR_028458 Daucus carota HOM05D000510 ORTHO05D006942 5.4e-16 87.4 63 61.9
Psat5g289200 Pisum sativum HOM05D000510 ORTHO05D006942 5.4e-16 87.4 55 67.3
TAR362G0688 Trochodendron aralioides HOM05D000510 ORTHO05D006942 5.4e-16 87.4 62 61.3
Eucgr.A00082 Eucalyptus grandis HOM05D000510 ORTHO05D006942 9.2e-16 86.7 61 63.9
AT3G59420 Arabidopsis thaliana HOM05D000510 ORTHO05D006942 1.2e-15 86.3 60 63.3
Ca_01257_v3 Cicer arietinum L. HOM05D000510 ORTHO05D006942 1.2e-15 86.3 58 63.8
Phvul.005G153100 Phaseolus vulgaris HOM05D000510 ORTHO05D006942 1.2e-15 86.3 60 60.0
AL5G41330 Arabidopsis lyrata HOM05D000510 ORTHO05D006942 1.6e-15 85.9 60 63.3
Medtr4g067230 Medicago truncatula HOM05D000510 ORTHO05D006942 1.6e-15 85.9 55 67.3
Phvul.011G054300 Phaseolus vulgaris HOM05D000510 ORTHO05D006942 1.6e-15 85.9 60 65.0
TPR.G34184 Trifolium pratense HOM05D000510 ORTHO05D006942 1.6e-15 85.9 55 67.3
EL10Ac3g05942 Beta vulgaris HOM05D000510 ORTHO05D006942 2.7e-15 85.1 63 60.3
TAR633G2069 Trochodendron aralioides HOM05D000510 ORTHO05D006942 2.7e-15 85.1 55 65.5
VMungo1127G0022 Vigna mungo HOM05D000510 ORTHO05D006942 2.7e-15 85.1 58 63.8
Ca_20788_v3 Cicer arietinum L. HOM05D000510 ORTHO05D006942 3.5e-15 84.7 55 65.5
TPR.G18847 Trifolium pratense HOM05D000510 ORTHO05D006942 3.5e-15 84.7 55 65.5
Ah.15g099620 Amaranthus hybridus HOM05D000510 ORTHO05D006942 6.0e-15 84.0 63 60.3
Medtr2g098910 Medicago truncatula HOM05D000510 ORTHO05D006942 6.0e-15 84.0 60 65.0
Nn1g09631 Nelumbo nucifera HOM05D000510 ORTHO05D006942 6.0e-15 84.0 62 58.1
Migut.B00097 Erythranthe guttata HOM05D000510 ORTHO05D006942 7.8e-15 83.6 58 67.2
PGR083G2844 Punica granatum HOM05D000510 ORTHO05D006942 7.8e-15 83.6 60 61.7
Aqoxy2G04122 Aquilegia oxysepala HOM05D000510 ORTHO05D006942 1.3e-14 82.8 58 60.3
AUR62002308 Chenopodium quinoa HOM05D000510 ORTHO05D006942 1.3e-14 82.8 65 60.0
AUR62015382 Chenopodium quinoa HOM05D000510 ORTHO05D006942 1.3e-14 82.8 63 58.7
Potri.017G029900 Populus trichocarpa HOM05D000510 ORTHO05D006942 1.3e-14 82.8 58 60.3
MSTRG.27653 Avicennia marina HOM05D000510 ORTHO05D006942 2.3e-14 82.0 66 62.1
Potri.007G128400 Populus trichocarpa HOM05D000510 ORTHO05D006942 2.3e-14 82.0 55 61.8
Sabra07G0104900 Salix brachista HOM05D000510 ORTHO05D006942 2.3e-14 82.0 55 61.8
MBI11_g04862_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 3.0e-14 81.6 55 63.6
Sabra17G0019300 Salix brachista HOM05D000510 ORTHO05D006942 3.0e-14 81.6 58 58.6
Zm00001eb406780 Zea mays HOM05D000510 ORTHO05D006942 3.9e-14 81.3 62 51.6
PSO017G6430 Papaver somniferum HOM05D000510 ORTHO05D006942 6.6e-14 80.5 55 65.5
SHI26082 Sapria himalayana HOM05D000510 ORTHO05D006942 6.6e-14 80.5 58 56.9
Ah.13g072870 Amaranthus hybridus HOM05D019857 ORTHO05D006942 8.6e-14 80.1 55 65.5
Os03g0637800 Oryza sativa ssp. japonica HOM05D000510 ORTHO05D006942 1.9e-13 79.0 55 54.5
PSO675G3025 Papaver somniferum HOM05D000510 ORTHO05D006942 2.5e-13 78.6 55 63.6
THA.LOC104802310 Tarenaya hassleriana HOM05D000510 ORTHO05D006942 2.5e-13 78.6 60 58.3
Lsat_1_v5_gn_3_115521 Lactuca sativa HOM05D000510 ORTHO05D006942 5.6e-13 77.4 73 53.4
HanXRQChr03g0091111 Helianthus annuus HOM05D000510 ORTHO05D006942 2.1e-12 75.5 58 55.2
ECA240G0569 Erigeron canadensis HOM05D000510 ORTHO05D006942 2.8e-12 75.1 72 48.6
ATR0824G045 Amborella trichopoda HOM05D000510 ORTHO05D006942 2.3e-11 72.0 55 58.2
arahy.Tifrunner.gnm1.ann1.VC2WT3 Arachis hypogaea HOM05D000510 ORTHO05D006942 3.1e-11 71.6 74 48.6
MBI10_g04881_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 5.2e-11 70.9 55 58.2
MBI18_g25928_MAGBIO Magnolia biondii HOM05D000008 ORTHO05D006942 1.5e-10 69.3 55 58.2
SGA_v2.0_scaffold58G20401 Striga asiatica HOM05D000510 ORTHO05D006942 9.9e-10 66.6 67 56.7
unitig_26.g9999 Utricularia gibba HOM05D000510 ORTHO05D006942 9.9e-10 66.6 67 52.2
MBI08_g14949_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 2.9e-09 65.1 47 55.3
BcaC01g02578 Brassica carinata HOM05D000510 ORTHO05D006942 5.4e-08 60.8 44 61.4
Pp3c6_19970 Physcomitrium patens HOM05D000510 ORTHO05D006942 3.5e-07 58.2 62 43.5


User provided reference genes

Program Settings