Gene: Sopen11g020450

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g020450
  • Transcript Identifier Sopen11g020450.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 46806047-46808629 : negative

Gene Family Information

  • ID HOM05D000510
  • #Genes/#Species 1053/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g020450.1

Descriptions

  • Description Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes. | crinkly4 (CR4) | CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region , Protein kinase, ATP binding site , Serine-threonine/tyrosine-protein kinase , Protein kinase-like domain , Serine/threonine-protein kinase, active site , Regulator of chromosome condensation/beta-lactamase-inhibitor protein II , Protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT3G59420
GO:0090627
ISO
PLAZA Integrative Orthologyplant epidermal cell differentiation Os03g0637800
GO:0099402
ISO
PLAZA Integrative Orthologyplant organ development Os03g0637800
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT3G59420
GO:0048439
ISO
PLAZA Integrative Orthologyflower morphogenesis Os03g0637800
GO:0046777
ISO
PLAZA Integrative Orthologyprotein autophosphorylation Os03g0637800
GO:0009786
ISO
PLAZA Integrative Orthologyregulation of asymmetric cell division AT3G59420
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G59420
GO:0048829
ISO
PLAZA Integrative Orthologyroot cap development AT3G59420
GO:0006468
IEA
InterProprotein phosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G59420
GO:0004672
IEA
InterProprotein kinase activity
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity Zm00001eb406780
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G59420
GO:0030139
ISO
PLAZA Integrative Orthologyendocytic vesicle AT3G59420
GO:0009986
ISO
PLAZA Integrative Orthologycell surface AT3G59420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR000719 Protein kinase domain
IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR011009 Protein kinase-like domain superfamily
Mapman id Description
18.4.1.26 Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (Crinkly-like)