Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44054 Davidia involucrata HOM05D004227 ORTHO05D005027 1.2e-82 309.7 151 100.0
Dinv43609 Davidia involucrata HOM05D004227 ORTHO05D005027 3.1e-81 305.1 151 97.4
Ciclev10022690m.g Citrus clementina HOM05D004227 ORTHO05D005027 1.5e-80 302.8 151 96.7
Hma1.2p1_1508F.1_g287710 Hydrangea macrophylla HOM05D004227 ORTHO05D005027 9.9e-80 300.1 151 95.4
Gohir.A11G075100 Gossypium hirsutum HOM05D004227 ORTHO05D005027 1.7e-79 299.3 152 96.1
Gorai.007G085400 Gossypium raimondii HOM05D004227 ORTHO05D005027 1.7e-79 299.3 152 96.1
Duzib133G0083 Durio zibethinus HOM05D004227 ORTHO05D005027 2.9e-79 298.5 152 96.1
Thecc.01G396100 Theobroma cacao HOM05D004227 ORTHO05D005027 2.9e-79 298.5 152 96.1
TWI23G1276 Tripterygium wilfordii HOM05D004227 ORTHO05D005027 3.8e-79 298.1 152 95.4
Duzib138G0704 Durio zibethinus HOM05D004227 ORTHO05D005027 4.9e-79 297.7 150 95.3
Gohir.A08G057900 Gossypium hirsutum HOM05D004227 ORTHO05D005027 4.9e-79 297.7 150 95.3
Gohir.D08G067200 Gossypium hirsutum HOM05D004227 ORTHO05D005027 4.9e-79 297.7 150 95.3
Gorai.004G069800 Gossypium raimondii HOM05D004227 ORTHO05D005027 4.9e-79 297.7 150 95.3
Gohir.D11G079800 Gossypium hirsutum HOM05D004227 ORTHO05D005027 8.4e-79 297.0 152 94.7
Nn1g00815 Nelumbo nucifera HOM05D004227 ORTHO05D005027 8.4e-79 297.0 151 94.0
TWI59G0764 Tripterygium wilfordii HOM05D004227 ORTHO05D005027 1.1e-78 296.6 152 94.7
TAR636G2330 Trochodendron aralioides HOM05D004227 ORTHO05D005027 1.1e-78 296.6 151 94.0
Cpa.g.sc22.26 Carica papaya HOM05D004227 ORTHO05D005027 2.4e-78 295.4 152 94.1
CsaV3_3G007250 Cucumis sativus L. HOM05D004227 ORTHO05D005027 3.2e-78 295.0 153 94.1
HPP92_014889 Vanilla planifolia HOM05D004227 ORTHO05D005027 4.1e-78 294.7 150 93.3
HPP92_014893 Vanilla planifolia HOM05D004227 ORTHO05D005027 4.1e-78 294.7 150 93.3
Sed0011885 Sechium edule HOM05D004227 ORTHO05D005027 5.4e-78 294.3 154 92.9
PSO063G7112 Papaver somniferum HOM05D004227 ORTHO05D005027 7.1e-78 293.9 151 93.4
PSO782G5116 Papaver somniferum HOM05D004227 ORTHO05D005027 7.1e-78 293.9 151 93.4
Hund24961 Selenicereus undatus HOM05D004227 ORTHO05D005027 7.1e-78 293.9 152 94.7
CDE06G1820 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 9.2e-78 293.5 150 93.3
CDE06G1835 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 9.2e-78 293.5 150 93.3
Migut.F00534 Erythranthe guttata HOM05D004227 ORTHO05D005027 9.2e-78 293.5 148 93.9
CSS0010737 Camellia sinensis var. sinensis HOM05D004227 ORTHO05D005027 1.2e-77 293.1 148 93.9
Nitab4.5_0003321g0070 Nicotiana tabacum HOM05D004227 ORTHO05D005027 1.2e-77 293.1 148 93.2
AUR62014174 Chenopodium quinoa HOM05D004227 ORTHO05D005027 2.1e-77 292.4 151 94.0
Nitab4.5_0002359g0040 Nicotiana tabacum HOM05D004227 ORTHO05D005027 2.1e-77 292.4 148 93.2
MSTRG.27225 Avicennia marina HOM05D004227 ORTHO05D005027 2.7e-77 292.0 148 93.9
Glyma.07G115700 Glycine max HOM05D004227 ORTHO05D005027 2.7e-77 292.0 148 94.6
Manes.05G055700 Manihot esculenta HOM05D004227 ORTHO05D005027 2.7e-77 292.0 151 94.7
Glyma.03G109200 Glycine max HOM05D004227 ORTHO05D005027 3.5e-77 291.6 148 93.9
Ah.01g017970 Amaranthus hybridus HOM05D004227 ORTHO05D005027 4.6e-77 291.2 151 94.7
EL10Ac6g14165 Beta vulgaris HOM05D004227 ORTHO05D005027 4.6e-77 291.2 152 94.1
HanXRQChr09g0252831 Helianthus annuus HOM05D004227 ORTHO05D005027 4.6e-77 291.2 150 92.7
SEGI_06195 Sequoiadendron giganteum HOM05D004227 ORTHO05D005027 4.6e-77 291.2 149 94.0
SEGI_27062 Sequoiadendron giganteum HOM05D004227 ORTHO05D005027 4.6e-77 291.2 149 94.0
Actinidia13618 Actinidia chinensis HOM05D004227 ORTHO05D005027 6.0e-77 290.8 148 92.6
Actinidia31661 Actinidia chinensis HOM05D004227 ORTHO05D005027 6.0e-77 290.8 148 92.6
arahy.Tifrunner.gnm1.ann1.CPA9TZ Arachis hypogaea HOM05D004227 ORTHO05D005027 6.0e-77 290.8 148 93.9
arahy.Tifrunner.gnm1.ann1.RC63K2 Arachis hypogaea HOM05D004227 ORTHO05D005027 6.0e-77 290.8 148 93.9
Lsat_1_v5_gn_0_10121 Lactuca sativa HOM05D004227 ORTHO05D005027 6.0e-77 290.8 156 90.4
Nitab4.5_0002153g0060 Nicotiana tabacum HOM05D004227 ORTHO05D005027 6.0e-77 290.8 147 93.9
Lj3g0003497 Lotus japonicus HOM05D004227 ORTHO05D005027 7.8e-77 290.4 148 93.9
Lj3g0012613 Lotus japonicus HOM05D004227 ORTHO05D005027 7.8e-77 290.4 148 93.9
Phvul.010G046900 Phaseolus vulgaris HOM05D004227 ORTHO05D005027 7.8e-77 290.4 148 93.9
Potri.014G049700 Populus trichocarpa HOM05D004227 ORTHO05D005027 1.0e-76 290.0 148 93.2
SGA_v2.0_scaffold44G16581 Striga asiatica HOM05D004227 ORTHO05D005027 1.0e-76 290.0 148 92.6
unitig_46.g18760 Utricularia gibba HOM05D004227 ORTHO05D005027 1.0e-76 290.0 148 91.9
COL.COLO4_12397 Corchorus olitorius HOM05D004227 ORTHO05D005027 1.3e-76 289.7 152 94.1
Rhsim03G0159900 Rhododendron simsii HOM05D004227 ORTHO05D005027 1.3e-76 289.7 151 93.4
VMungo0331G1366 Vigna mungo HOM05D004227 ORTHO05D005027 1.3e-76 289.7 148 93.9
ECA232G0872 Erigeron canadensis HOM05D004227 ORTHO05D005027 1.7e-76 289.3 145 94.5
FAN01G2506 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-76 288.9 148 93.2
FAN03G2167 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-76 288.9 148 93.2
FAN06G3355 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-76 288.9 148 93.2
FAN10G0507 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-76 288.9 148 93.2
FAN10G0749 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-76 288.9 148 93.2
Glyma.15G097500 Glycine max HOM05D004227 ORTHO05D005027 2.3e-76 288.9 148 93.2
Os12g0287200 Oryza sativa ssp. japonica HOM05D004227 ORTHO05D005027 2.3e-76 288.9 153 92.8
RcHm_v2.0_Chr1g0348061 Rosa chinensis HOM05D004227 ORTHO05D005027 2.3e-76 288.9 148 93.2
CANSAT25G0195 Cannabis sativa HOM05D004227 ORTHO05D005027 3.0e-76 288.5 148 93.2
MD07G1109700 Malus domestica HOM05D004227 ORTHO05D005027 3.0e-76 288.5 148 93.9
Medtr3g118110 Medicago truncatula HOM05D004227 ORTHO05D005027 3.0e-76 288.5 148 93.2
Phvul.006G161800 Phaseolus vulgaris HOM05D004227 ORTHO05D005027 3.0e-76 288.5 148 93.2
TPR.G38529 Trifolium pratense HOM05D004227 ORTHO05D005027 3.0e-76 288.5 148 93.2
Ca_15636_v3 Cicer arietinum L. HOM05D004227 ORTHO05D005027 3.9e-76 288.1 148 93.2
Potri.002G138500 Populus trichocarpa HOM05D004227 ORTHO05D005027 3.9e-76 288.1 153 91.5
FAN06G2246 Fragaria x ananassa HOM05D004227 ORTHO05D005027 5.1e-76 287.7 148 92.6
Psat5g001800 Pisum sativum HOM05D004227 ORTHO05D005027 5.1e-76 287.7 148 93.2
Solyc03g093680.4 Solanum lycopersicum HOM05D004227 ORTHO05D005027 5.1e-76 287.7 147 92.5
Sopen03g024580 Solanum pennellii HOM05D004227 ORTHO05D005027 5.1e-76 287.7 147 92.5
Prupe.2G133100 Prunus persica HOM05D004227 ORTHO05D005027 6.6e-76 287.3 148 93.2
Eucgr.D01223 Eucalyptus grandis HOM05D004227 ORTHO05D005027 1.1e-75 286.6 148 92.6
THA.LOC104816996 Tarenaya hassleriana HOM05D004227 ORTHO05D005027 1.1e-75 286.6 151 92.1
Zm00001eb174310 Zea mays HOM05D004227 ORTHO05D005027 1.1e-75 286.6 149 91.3
AagrBONN_evm.TU.Sc2ySwM_344.2698 Anthoceros agrestis HOM05D004227 ORTHO05D005027 1.5e-75 286.2 150 91.3
Lalb_Chr06g0171081 Lupinus albus HOM05D004227 ORTHO05D005027 1.9e-75 285.8 148 92.6
Aqoxy3G01907 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 2.5e-75 285.4 150 92.0
PGR004G2481 Punica granatum HOM05D004227 ORTHO05D005027 2.5e-75 285.4 148 91.2
HanXRQChr15g0493591 Helianthus annuus HOM05D004227 ORTHO05D005027 3.3e-75 285.0 144 93.8
Pp3c1_16440 Physcomitrium patens HOM05D004227 ORTHO05D005027 3.3e-75 285.0 149 91.3
Pp3c2_21720 Physcomitrium patens HOM05D004227 ORTHO05D005027 3.3e-75 285.0 149 91.3
PGR004G2111 Punica granatum HOM05D004227 ORTHO05D005027 3.3e-75 285.0 148 91.9
THA.LOC104801496 Tarenaya hassleriana HOM05D004227 ORTHO05D005027 4.3e-75 284.6 151 91.4
Aqoxy91s003 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 5.6e-75 284.3 150 92.0
BcaC07g42439 Brassica carinata HOM05D004227 ORTHO05D005027 5.6e-75 284.3 151 90.7
BolC8t52927H Brassica oleracea HOM05D004227 ORTHO05D005027 5.6e-75 284.3 151 90.7
Mapoly0032s0045 Marchantia polymorpha HOM05D004227 ORTHO05D005027 9.6e-75 283.5 149 91.3
CAN.G460.2 Capsicum annuum HOM05D004227 ORTHO05D005027 1.2e-74 283.1 147 91.2
BcaC07g42337 Brassica carinata HOM05D004227 ORTHO05D005027 2.1e-74 282.3 150 90.0
AL1G10090 Arabidopsis lyrata HOM05D004227 ORTHO05D005027 2.8e-74 282.0 151 88.7
COL.COLO4_14773 Corchorus olitorius HOM05D004227 ORTHO05D005027 2.8e-74 282.0 152 91.4
Thhalv10009013m.g Eutrema salsugineum HOM05D004227 ORTHO05D005027 3.6e-74 281.6 151 88.1
Os08g0107900 Oryza sativa ssp. japonica HOM05D004227 ORTHO05D005027 6.2e-74 280.8 144 93.8
A10p00100 Brassica napus HOM05D004227 ORTHO05D005027 1.1e-73 280.0 148 90.5
BraA10t42288Z Brassica rapa HOM05D004227 ORTHO05D005027 1.1e-73 280.0 148 90.5
Carub.0001s0001 Capsella rubella HOM05D004227 ORTHO05D005027 1.1e-73 280.0 151 88.7
AT1G02140 Arabidopsis thaliana HOM05D004227 ORTHO05D005027 1.8e-73 279.3 151 88.1
Cfa009863 Carpinus fangiana HOM05D004227 ORTHO05D005027 3.1e-73 278.5 148 90.5
QL04p029953 Quercus lobata HOM05D004227 ORTHO05D005027 5.2e-73 277.7 147 90.5
QL07p006029 Quercus lobata HOM05D004227 ORTHO05D005027 5.2e-73 277.7 147 90.5
BcaB03g13634 Brassica carinata HOM05D004227 ORTHO05D005027 1.2e-72 276.6 148 89.9
C05p00070 Brassica napus HOM05D004227 ORTHO05D005027 1.2e-72 276.6 148 89.9
CARHR000190 Cardamine hirsuta HOM05D004227 ORTHO05D005027 2.0e-72 275.8 152 88.8
CiPaw.14G019900 Carya illinoinensis HOM05D004227 ORTHO05D005027 7.6e-72 273.9 144 89.6
Rhsim13G0168500 Rhododendron simsii HOM05D004227 ORTHO05D005027 8.4e-71 270.4 148 89.9
BolC5t28794H Brassica oleracea HOM05D004227 ORTHO05D005027 1.9e-70 269.2 156 85.3
Zm00001eb260270 Zea mays HOM05D004227 ORTHO05D005027 1.9e-70 269.2 143 90.9
Lalb_Chr01g0012541 Lupinus albus HOM05D004227 ORTHO05D005027 2.7e-69 265.4 140 90.0
Sp1g00120 Schrenkiella parvula HOM05D004227 ORTHO05D005027 2.3e-68 262.3 138 89.9
MBI19_g27175_MAGBIO Magnolia biondii HOM05D004227 ORTHO05D005027 3.3e-67 258.5 129 94.6
TAR629G1537 Trochodendron aralioides HOM05D004227 ORTHO05D005027 5.6e-67 257.7 131 92.4
Aa31LG1G11540 Aethionema arabicum HOM05D004227 ORTHO05D005027 1.3e-66 256.5 131 92.4
ClCG05G000140 Citrullus lanatus HOM05D004227 ORTHO05D005027 2.1e-66 255.8 133 92.5
MELO3C005946.2 Cucumis melo HOM05D004227 ORTHO05D005027 2.1e-66 255.8 133 92.5
AUR62039531 Chenopodium quinoa HOM05D004227 ORTHO05D005027 2.8e-66 255.4 142 87.3
BraA09t42281Z Brassica rapa HOM05D004227 ORTHO05D005027 4.8e-66 254.6 153 81.0
A09p69360 Brassica napus HOM05D004227 ORTHO05D005027 1.1e-65 253.4 153 81.0
Oeu030870.1 Olea europaea HOM05D004227 ORTHO05D005027 1.1e-65 253.4 128 93.0
Nitab4.5_0004457g0020 Nicotiana tabacum HOM05D004227 ORTHO05D005027 1.4e-65 253.1 129 92.2
Atru.chr2.217 Acer truncatum HOM05D004227 ORTHO05D005027 1.8e-65 252.7 132 92.4
FvH4_7g10360 Fragaria vesca HOM05D004227 ORTHO05D005027 1.8e-65 252.7 142 85.2
SalBow3G0312 Salvia bowleyana HOM05D004227 ORTHO05D005027 1.8e-65 252.7 129 90.7
Lj7A548G44 Lonicera japonica HOM05D004227 ORTHO05D005027 2.4e-65 252.3 127 93.7
Lj9A555T36 Lonicera japonica HOM05D004227 ORTHO05D005027 2.4e-65 252.3 128 93.0
SalBow3G4020 Salvia bowleyana HOM05D004227 ORTHO05D005027 2.4e-65 252.3 127 91.3
PGSC0003DMG400021002 Solanum tuberosum HOM05D004227 ORTHO05D005027 2.4e-65 252.3 130 90.8
Peaxi162Scf01305g00032 Petunia axillaris HOM05D004227 ORTHO05D005027 4.0e-65 251.5 127 92.9
unitig_37.g12485 Utricularia gibba HOM05D004227 ORTHO05D005027 4.0e-65 251.5 129 93.0
vmacro05443 Vaccinium macrocarpon HOM05D004227 ORTHO05D005027 5.3e-65 251.1 137 89.1
Oeu046442.1 Olea europaea HOM05D004227 ORTHO05D005027 6.9e-65 250.8 128 92.2
Sc24g0004090 Simmondsia chinensis HOM05D004227 ORTHO05D005027 9.0e-65 250.4 128 93.0
Aqoxy109s003 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 7.6e-64 247.3 145 83.4
Peaxi162Scf00304g01023 Petunia axillaris HOM05D004227 ORTHO05D005027 7.6e-64 247.3 148 83.8
Aqoxy3G01910 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 9.9e-64 246.9 130 90.8
Sabra02G0107500 Salix brachista HOM05D004227 ORTHO05D005027 9.9e-64 246.9 129 89.1
SGA_v2.0_scaffold60G20835 Striga asiatica HOM05D004227 ORTHO05D005027 3.5e-61 238.4 140 81.4
Cre09.g392692 Chlamydomonas reinhardtii HOM05D004227 ORTHO05D005027 3.0e-60 235.3 143 73.4
MCO04G284 Micromonas commoda HOM05D004227 ORTHO05D005027 6.7e-60 234.2 144 72.9
Medtr3g109260 Medicago truncatula HOM05D004227 ORTHO05D005027 6.2e-58 227.6 147 72.8
ATR0090G010 Amborella trichopoda HOM05D004227 ORTHO05D005027 1.4e-57 226.5 153 75.2
Haze_23235 Corylus avellana HOM05D004227 ORTHO05D005027 7.1e-54 214.2 184 62.0
CiPaw.13G025400 Carya illinoinensis HOM05D004227 ORTHO05D005027 1.3e-52 209.9 116 86.2
Pp3c1_16390 Physcomitrium patens HOM05D004227 ORTHO05D005027 6.7e-52 207.6 145 73.1
SHI13620 Sapria himalayana HOM05D004227 ORTHO05D005027 2.5e-51 205.7 126 77.8
Cc02_g04830 Coffea canephora HOM05D004227 ORTHO05D005027 2.1e-50 202.6 103 95.1
GSVIVG01013876001 Vitis vinifera HOM05D004227 ORTHO05D005027 1.2e-48 196.8 103 92.2
Lsat_1_v5_gn_2_127120 Lactuca sativa HOM05D004227 ORTHO05D005027 2.6e-48 195.7 103 90.3
Haze_27249 Corylus avellana HOM05D004227 ORTHO05D005027 1.4e-46 189.9 114 77.2
CDE06G1723 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 9.6e-43 177.2 87 94.3
C08p54180 Brassica napus HOM05D004227 ORTHO05D005027 5.3e-41 171.4 115 77.4
Atru.chr5.117 Acer truncatum HOM05D004227 ORTHO05D005027 5.9e-40 167.9 82 93.9
VMungo0540G1169 Vigna mungo HOM05D004227 ORTHO05D005027 3.6e-37 158.7 83 86.7
CBR_g19771 Chara braunii HOM05D004227 ORTHO05D005027 4.6e-37 158.3 81 93.8
HPP92_020677 Vanilla planifolia HOM05D004227 ORTHO05D005027 3.0e-36 155.6 146 58.9
Rhsim13G0168700 Rhododendron simsii HOM05D004227 ORTHO05D005027 1.8e-33 146.4 73 97.3
MD00G1129300 Malus domestica HOM05D004227 ORTHO05D005027 4.2e-30 135.2 70 88.6
Aqoxy3G01908 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 2.0e-27 126.3 71 85.9
Aqoxy91s002 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 7.4e-27 124.4 71 85.9
Aqoxy3G01911 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 3.7e-26 122.1 71 84.5
Actinidia01038 Actinidia chinensis HOM05D004227 ORTHO05D005027 1.8e-25 119.8 77 75.3
Sed0011381 Sechium edule HOM05D004227 ORTHO05D373379 3.5e-16 89.0 45 95.6
Aqoxy109s002 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 2.2e-15 86.3 46 89.1
Haze_23858 Corylus avellana HOM05D004227 ORTHO05D034883 6.1e-13 78.2 84 50.0


User provided reference genes

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