Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43551 Davidia involucrata HOM05D006268 ORTHO05D180404 1.3e-41 172.6 83 100.0
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 7.5e-13 77.0 80 50.0
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 6.5e-09 63.9 80 45.0
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 1.1e-08 63.2 78 47.4
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 1.5e-08 62.8 80 42.5
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 7.2e-08 60.5 77 42.9
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 9.4e-08 60.1 77 42.9
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 9.4e-08 60.1 77 42.9
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 1.6e-07 59.3 80 42.5
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 2.7e-07 58.5 80 42.5
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 2.7e-07 58.5 80 42.5
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 3.6e-07 58.2 81 44.4
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 6.1e-07 57.4 82 42.7
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 6.1e-07 57.4 82 42.7
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 6.1e-07 57.4 77 44.2
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 8.0e-07 57.0 80 41.2
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 8.0e-07 57.0 80 41.2
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 1.0e-06 56.6 77 44.2
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 1.0e-06 56.6 83 42.2
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 1.0e-06 56.6 81 43.2
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 1.0e-06 56.6 75 44.0
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 1.0e-06 56.6 81 44.4
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.4e-06 56.2 81 43.2
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 4.0e-06 54.7 80 41.2
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 4.0e-06 54.7 82 46.3
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 5.2e-06 54.3 78 44.9
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 5.2e-06 54.3 81 42.0
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 6.8e-06 53.9 75 45.3
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 6.8e-06 53.9 76 40.8
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 8.8e-06 53.5 79 43.0


User provided reference genes

Program Settings