Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 6.4e-100 367.5 192 100.0
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 6.4e-100 367.5 192 100.0
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 2.3e-81 305.8 192 83.9
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 2.8e-71 272.3 190 73.2
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 6.2e-71 271.2 196 74.0
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.5e-69 266.5 191 76.4
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 5.8e-69 264.6 192 75.5
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 1.4e-67 260.0 193 75.6
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 3.2e-67 258.8 192 71.9
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 5.5e-67 258.1 192 73.4
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.2e-66 256.9 192 72.9
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.2e-66 256.9 192 72.9
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 2.7e-66 255.8 192 70.8
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 3.5e-66 255.4 196 73.0
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 6.0e-66 254.6 191 73.3
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 1.0e-65 253.8 193 73.1
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.8e-65 253.1 191 72.8
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 2.3e-65 252.7 196 72.4
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 2.3e-65 252.7 193 72.5
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 3.0e-65 252.3 189 72.5
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 3.9e-65 251.9 184 76.1
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 5.1e-65 251.5 197 71.1
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.5e-64 250.0 192 69.8
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 1.5e-64 250.0 190 71.6
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 1.5e-64 250.0 191 72.8
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.5e-64 250.0 192 72.9
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.5e-64 249.2 192 71.9
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 2.5e-64 249.2 191 71.7
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 2.5e-64 249.2 193 70.5
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 3.3e-64 248.8 192 71.4
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 4.3e-64 248.4 189 71.4
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 5.7e-64 248.1 195 69.7
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.6e-63 246.5 192 72.4
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 8.2e-63 244.2 146 86.3
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 1.8e-62 243.0 191 69.1
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 3.1e-62 242.3 192 68.2
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 4.1e-62 241.9 191 70.2
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 9.0e-62 240.7 196 69.4
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 4.5e-61 238.4 191 70.2
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 7.6e-61 237.7 195 67.7
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 7.6e-61 237.7 195 67.2
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 1.0e-60 237.3 196 69.9
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 2.2e-60 236.1 191 70.7
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 2.2e-60 236.1 194 67.0
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.9e-60 235.7 194 67.0
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 5.0e-60 235.0 191 69.6
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.1e-59 233.8 184 71.7
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 1.1e-59 233.8 192 66.1
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.1e-59 233.8 194 66.5
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 1.4e-59 233.4 195 67.7
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 7.2e-59 231.1 196 68.4
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 1.2e-58 230.3 169 74.6
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 2.7e-58 229.2 199 66.3
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 1.4e-57 226.9 182 69.8
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 3.0e-57 225.7 191 67.5
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 8.8e-57 224.2 191 67.5
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.5e-56 223.4 191 67.0
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 2.5e-56 222.6 190 65.8
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 9.7e-56 220.7 191 63.9
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 2.2e-55 219.5 193 64.8
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.1e-54 217.2 195 66.2
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 1.1e-54 217.2 199 64.3
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.4e-54 216.9 192 65.1
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 3.1e-54 215.7 191 65.4
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 5.3e-54 214.9 198 63.1
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 5.3e-54 214.9 192 65.6
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.5e-53 213.4 192 64.1
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 5.9e-53 211.5 198 63.1
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 7.7e-53 211.1 192 65.6
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 3.8e-52 208.8 192 62.5
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 3.8e-52 208.8 188 63.8
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 5.0e-52 208.4 194 62.4
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 8.5e-52 207.6 178 65.2
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 5.5e-51 204.9 196 59.7
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 5.5e-51 204.9 216 57.4
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 1.6e-50 203.4 192 61.5
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 3.6e-50 202.2 192 64.1
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 3.6e-50 202.2 191 62.8
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 6.1e-50 201.4 190 62.1
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 1.4e-49 200.3 190 60.5
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 5.1e-49 198.4 200 60.5
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 1.5e-48 196.8 190 62.6
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 2.0e-48 196.4 192 58.3
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 3.3e-48 195.7 192 58.3
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 4.4e-48 195.3 173 61.3
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 7.4e-48 194.5 175 64.6
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 7.4e-48 194.5 191 60.7
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.3e-47 193.7 194 58.2
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 1.3e-47 193.7 190 60.5
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 1.7e-47 193.4 191 61.8
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 1.7e-47 193.4 191 61.8
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 2.2e-47 193.0 170 64.1
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 2.0e-45 186.4 150 69.3
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 2.6e-45 186.0 199 56.3
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 5.9e-45 184.9 192 57.8
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 6.5e-44 181.4 190 55.8
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 5.5e-43 178.3 192 56.8
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 6.1e-42 174.9 147 69.4
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.8e-41 173.3 205 50.7
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 8.8e-41 171.0 193 56.5
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 8.8e-41 171.0 88 97.7
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 1.7e-39 166.8 189 49.2
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.1e-38 164.1 193 52.8
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 1.8e-38 163.3 150 66.7
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 7.0e-38 161.4 188 48.9
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 7.7e-37 157.9 193 51.8
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 7.7e-37 157.9 188 52.7
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 9.4e-35 151.0 193 45.6
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 2.1e-34 149.8 221 46.6
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 8.0e-34 147.9 211 46.0
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 1.0e-33 147.5 192 46.4
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 1.0e-33 147.5 192 46.4
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 3.0e-33 146.0 192 48.4
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 3.3e-32 142.5 139 61.2
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 4.4e-32 142.1 125 64.0
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 1.3e-31 140.6 110 71.8
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 1.4e-30 137.1 192 44.8
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 1.8e-30 136.7 190 44.2
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 5.3e-30 135.2 83 81.9
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.2e-29 134.0 83 80.7
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 5.9e-29 131.7 80 88.8
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 1.7e-28 130.2 83 79.5
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 6.5e-28 128.3 147 54.4
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 6.1e-26 121.7 208 41.3
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 8.0e-26 121.3 148 54.1
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 1.8e-25 120.2 169 45.0
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 2.6e-24 116.3 89 68.5
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 3.1e-22 109.4 79 72.2
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.0e-21 106.7 120 59.2
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 4.2e-19 99.0 158 44.9
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 4.2e-19 99.0 90 57.8
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 6.1e-18 95.1 59 83.1
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 4.0e-17 92.4 63 77.8
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 2.6e-16 89.7 101 50.5
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 1.1e-14 84.3 134 41.8
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 3.1e-14 82.8 92 50.0
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 9.2e-14 81.3 87 51.7
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 5.0e-12 75.5 86 53.5
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 7.3e-11 71.6 76 57.9
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 1.4e-09 67.4 48 68.8
CiPaw.15G164900 Carya illinoinensis HOM05D005762 ORTHO05D006823 8.9e-09 64.7 87 50.6
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 1.5e-08 63.9 182 31.9


User provided reference genes

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