Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42877 Davidia involucrata HOM05D005429 ORTHO05D006697 6.7e-63 244.2 158 100.0
Dinv43223 Davidia involucrata HOM05D005429 ORTHO05D006697 6.7e-63 244.2 158 100.0
Dinv44073 Davidia involucrata HOM05D005429 ORTHO05D006697 1.8e-55 219.5 128 93.0
Rhsim03G0256400 Rhododendron simsii HOM05D005429 ORTHO05D006697 6.7e-55 217.6 129 91.5
Rhsim10G0195600 Rhododendron simsii HOM05D005429 ORTHO05D006697 6.7e-55 217.6 129 91.5
Actinidia23548 Actinidia chinensis HOM05D005429 ORTHO05D006697 3.3e-54 215.3 158 89.2
TAR624G1317 Trochodendron aralioides HOM05D005429 ORTHO05D006697 4.4e-54 214.9 130 90.8
GSVIVG01036692001 Vitis vinifera HOM05D005429 ORTHO05D006697 7.5e-54 214.2 130 87.7
CiPaw.05G164700 Carya illinoinensis HOM05D005429 ORTHO05D006697 1.7e-53 213.0 125 91.2
CSS0004524 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 2.2e-53 212.6 156 87.2
Prupe.7G260300 Prunus persica HOM05D005429 ORTHO05D006697 3.7e-53 211.8 130 88.5
Nitab4.5_0009812g0020 Nicotiana tabacum HOM05D005429 ORTHO05D006697 8.2e-53 210.7 127 88.2
CSS0015948 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 1.1e-52 210.3 156 87.8
CSS0034504 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 1.1e-52 210.3 156 87.8
Nitab4.5_0000548g0210 Nicotiana tabacum HOM05D005429 ORTHO05D006697 2.4e-52 209.1 127 87.4
vmacro06089 Vaccinium macrocarpon HOM05D005429 ORTHO05D006697 2.4e-52 209.1 126 88.9
Ciclev10022715m.g Citrus clementina HOM05D005429 ORTHO05D006697 4.1e-52 208.4 127 86.6
Lj7A456T20 Lonicera japonica HOM05D005429 ORTHO05D006697 4.1e-52 208.4 132 87.1
Cc02_g22920 Coffea canephora HOM05D005429 ORTHO05D006697 1.2e-51 206.8 122 90.2
Gohir.D02G066500 Gossypium hirsutum HOM05D005429 ORTHO05D006697 4.5e-51 204.9 124 87.1
Duzib116G0688 Durio zibethinus HOM05D005429 ORTHO05D006697 7.7e-51 204.1 124 87.1
QL11p022585 Quercus lobata HOM05D005429 ORTHO05D006697 7.7e-51 204.1 128 85.9
Solyc03g083300.3 Solanum lycopersicum HOM05D005429 ORTHO05D006697 1.0e-50 203.8 127 84.3
Sopen03g023050 Solanum pennellii HOM05D005429 ORTHO05D006697 1.0e-50 203.8 127 84.3
PGSC0003DMG400009083 Solanum tuberosum HOM05D005429 ORTHO05D006697 1.3e-50 203.4 127 84.3
COL.COLO4_05834 Corchorus olitorius HOM05D005429 ORTHO05D006697 2.2e-50 202.6 122 87.7
Thecc.05G251100 Theobroma cacao HOM05D005429 ORTHO05D006697 2.2e-50 202.6 125 85.6
Lsat_1_v5_gn_2_59100 Lactuca sativa HOM05D005429 ORTHO05D006697 2.9e-50 202.2 128 82.8
PGR083G0776 Punica granatum HOM05D005429 ORTHO05D006697 2.9e-50 202.2 130 83.1
Gorai.005G075400 Gossypium raimondii HOM05D005429 ORTHO05D006697 3.8e-50 201.8 124 85.5
Cfa010706 Carpinus fangiana HOM05D005429 ORTHO05D006697 5.0e-50 201.4 127 85.8
Potri.008G080700 Populus trichocarpa HOM05D005429 ORTHO05D006697 1.5e-49 199.9 130 83.1
Aqoxy3G02759 Aquilegia oxysepala HOM05D005429 ORTHO05D006697 1.9e-49 199.5 125 85.6
Gohir.A02G061000 Gossypium hirsutum HOM05D005429 ORTHO05D006697 1.9e-49 199.5 123 86.2
LjContig00222g0019384 Lotus japonicus HOM05D005429 ORTHO05D006697 1.9e-49 199.5 158 81.0
Thecc.08G200900 Theobroma cacao HOM05D005429 ORTHO05D006697 1.9e-49 199.5 124 84.7
ClCG11G011870 Citrullus lanatus HOM05D005429 ORTHO05D006697 3.2e-49 198.7 123 86.2
Ca_03324_v3 Cicer arietinum L. HOM05D005429 ORTHO05D006697 4.2e-49 198.4 130 83.8
ECA238G3108 Erigeron canadensis HOM05D005429 ORTHO05D006697 5.5e-49 198.0 124 83.9
Eucgr.C03287 Eucalyptus grandis HOM05D005429 ORTHO05D006697 5.5e-49 198.0 122 87.7
CsaV3_1G046300 Cucumis sativus L. HOM05D005429 ORTHO05D006697 1.2e-48 196.8 123 85.4
Eucgr.C04279 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.2e-48 196.8 122 87.7
Medtr2g062860 Medicago truncatula HOM05D005429 ORTHO05D006697 1.2e-48 196.8 130 84.6
DCAR_027354 Daucus carota HOM05D005429 ORTHO05D006697 1.6e-48 196.4 125 84.8
Eucgr.F00079 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.6e-48 196.4 122 86.9
Glyma.15G204300 Glycine max HOM05D005429 ORTHO05D006697 1.6e-48 196.4 130 83.1
MSTRG.26291 Avicennia marina HOM05D005429 ORTHO05D006697 2.1e-48 196.1 130 81.5
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 2.7e-48 195.7 124 86.3
MELO3C021751.2 Cucumis melo HOM05D005429 ORTHO05D006697 3.6e-48 195.3 123 84.6
TWI18G1141 Tripterygium wilfordii HOM05D005429 ORTHO05D006697 3.6e-48 195.3 130 81.5
Psat1g130720 Pisum sativum HOM05D005429 ORTHO05D006697 8.0e-48 194.1 128 83.6
Nn4g23117 Nelumbo nucifera HOM05D005429 ORTHO05D006697 1.0e-47 193.7 123 87.0
Atru.chr3.2997 Acer truncatum HOM05D005429 ORTHO05D006697 1.4e-47 193.4 140 77.9
Lalb_Chr01g0015641 Lupinus albus HOM05D005429 ORTHO05D006697 1.4e-47 193.4 128 83.6
Glyma.08G160100 Glycine max HOM05D005429 ORTHO05D006697 2.3e-47 192.6 130 83.1
HanXRQChr14g0437971 Helianthus annuus HOM05D005429 ORTHO05D006697 2.3e-47 192.6 123 82.1
EL10Ac5g12584 Beta vulgaris HOM05D005429 ORTHO05D006697 3.0e-47 192.2 130 77.7
Sed0018631 Sechium edule HOM05D005429 ORTHO05D006697 3.0e-47 192.2 122 84.4
Phvul.005G043700 Phaseolus vulgaris HOM05D005429 ORTHO05D006697 4.0e-47 191.8 128 82.8
VMungo1080G0054 Vigna mungo HOM05D005429 ORTHO05D006697 5.2e-47 191.4 128 82.0
arahy.Tifrunner.gnm1.ann1.WT0EG6 Arachis hypogaea HOM05D005429 ORTHO05D006697 6.8e-47 191.0 128 82.0
Cpa.g.sc16.3 Carica papaya HOM05D005429 ORTHO05D006697 6.8e-47 191.0 125 80.0
PSO384G3609 Papaver somniferum HOM05D005429 ORTHO05D006697 8.8e-47 190.7 128 80.5
AUR62006203 Chenopodium quinoa HOM05D005429 ORTHO05D006697 1.2e-46 190.3 129 77.5
AUR62030412 Chenopodium quinoa HOM05D005429 ORTHO05D006697 1.2e-46 190.3 129 77.5
Sc16g0002320 Simmondsia chinensis HOM05D005429 ORTHO05D006697 1.2e-46 190.3 155 80.6
THA.LOC104812397 Tarenaya hassleriana HOM05D005429 ORTHO05D006697 1.5e-46 189.9 124 81.5
CARHR016900 Cardamine hirsuta HOM05D005429 ORTHO05D006697 2.0e-46 189.5 122 80.3
PSO832G0230 Papaver somniferum HOM05D005429 ORTHO05D006697 2.0e-46 189.5 128 79.7
Peaxi162Scf03254g00010 Petunia axillaris HOM05D005429 ORTHO05D006697 2.6e-46 189.1 124 84.7
SGA_v2.0_scaffold147G36309 Striga asiatica HOM05D005429 ORTHO05D006697 2.6e-46 189.1 152 81.6
Aa31LG7G970 Aethionema arabicum HOM05D005429 ORTHO05D006697 3.4e-46 188.7 122 80.3
Migut.N01785 Erythranthe guttata HOM05D005429 ORTHO05D006697 3.4e-46 188.7 152 81.6
Manes.03G077300 Manihot esculenta HOM05D005429 ORTHO05D006697 3.4e-46 188.7 130 79.2
arahy.Tifrunner.gnm1.ann1.9U3PF1 Arachis hypogaea HOM05D005429 ORTHO05D006697 4.4e-46 188.3 120 85.0
PSO210G6955 Papaver somniferum HOM05D005429 ORTHO05D006697 4.4e-46 188.3 128 79.7
AT1G16430 Arabidopsis thaliana HOM05D005429 ORTHO05D006697 5.7e-46 188.0 124 78.2
CDE02G4404 Ceratophyllum demersum HOM05D005429 ORTHO05D006697 5.7e-46 188.0 124 79.8
PSO339G4006 Papaver somniferum HOM05D005429 ORTHO05D006697 9.8e-46 187.2 125 80.8
RcHm_v2.0_Chr5g0022991 Rosa chinensis HOM05D005429 ORTHO05D006697 1.3e-45 186.8 120 80.8
AT1G07950 Arabidopsis thaliana HOM05D005429 ORTHO05D006697 1.7e-45 186.4 122 78.7
Sp1g14580 Schrenkiella parvula HOM05D005429 ORTHO05D006697 2.2e-45 186.0 122 80.3
AL1G28560 Arabidopsis lyrata HOM05D005429 ORTHO05D006697 2.8e-45 185.7 122 77.9
BraA06t24400Z Brassica rapa HOM05D005429 ORTHO05D006697 6.3e-45 184.5 124 77.4
TPR.G39484 Trifolium pratense HOM05D005429 ORTHO05D006697 8.3e-45 184.1 130 78.5
AL1G18280 Arabidopsis lyrata HOM05D005429 ORTHO05D006697 1.1e-44 183.7 122 77.9
BcaC05g25573 Brassica carinata HOM05D005429 ORTHO05D006697 1.4e-44 183.3 122 77.9
C05p14630 Brassica napus HOM05D005429 ORTHO05D006697 1.4e-44 183.3 122 77.9
BolC5t30184H Brassica oleracea HOM05D005429 ORTHO05D006697 1.4e-44 183.3 122 77.9
CANSAT56G3386 Cannabis sativa HOM05D005429 ORTHO05D006697 1.4e-44 183.3 123 77.2
BcaB02g06622 Brassica carinata HOM05D005429 ORTHO05D006697 1.8e-44 183.0 122 78.7
Carub.0001s0730 Capsella rubella HOM05D005429 ORTHO05D006697 2.4e-44 182.6 122 77.0
A06p12360 Brassica napus HOM05D005429 ORTHO05D006697 3.1e-44 182.2 122 77.0
Sabra08G0060000 Salix brachista HOM05D005429 ORTHO05D006697 3.1e-44 182.2 124 79.0
Hund11041 Selenicereus undatus HOM05D005429 ORTHO05D006697 4.1e-44 181.8 131 74.8
Peaxi162Scf00003g03942 Petunia axillaris HOM05D005429 ORTHO05D006697 5.4e-44 181.4 124 81.5
FAN16G2737 Fragaria x ananassa HOM05D005429 ORTHO05D006697 1.2e-43 180.3 154 76.0
FvH4_3g13800 Fragaria vesca HOM05D005429 ORTHO05D006697 2.7e-43 179.1 126 75.4
FAN11G0784 Fragaria x ananassa HOM05D005429 ORTHO05D006697 2.7e-43 179.1 126 75.4
FAN21G1331 Fragaria x ananassa HOM05D005429 ORTHO05D006697 2.7e-43 179.1 126 75.4
unitig_749.g13420 Utricularia gibba HOM05D005429 ORTHO05D006697 3.5e-43 178.7 119 76.5
FAN25G2434 Fragaria x ananassa HOM05D005429 ORTHO05D006697 4.5e-43 178.3 126 75.4
Hma1.2p1_0817F.1_g223090 Hydrangea macrophylla HOM05D005429 ORTHO05D006697 7.7e-43 177.6 129 79.1
Thhalv10008938m.g Eutrema salsugineum HOM05D005429 ORTHO05D006697 1.0e-42 177.2 131 73.3
HPP92_024623 Vanilla planifolia HOM05D005429 ORTHO05D006697 1.3e-42 176.8 124 75.8
SGA_v2.0_scaffold19G08578 Striga asiatica HOM05D005429 ORTHO05D006697 2.9e-42 175.6 116 79.3
Carub.0001s1617 Capsella rubella HOM05D005429 ORTHO05D006697 1.1e-41 173.7 122 75.4
QL02p100061 Quercus lobata HOM05D005429 ORTHO05D006697 1.5e-41 173.3 199 55.3
Haze_03266 Corylus avellana HOM05D005429 ORTHO05D006697 5.5e-41 171.4 206 53.9
Ah.04g163250 Amaranthus hybridus HOM05D005429 ORTHO05D006697 1.6e-40 169.9 130 70.8
DCAR_014816 Daucus carota HOM05D005429 ORTHO05D006697 8.0e-40 167.5 120 73.3
SEGI_11251 Sequoiadendron giganteum HOM05D005429 ORTHO05D006697 8.0e-40 167.5 125 70.4
Os08g0480500 Oryza sativa ssp. japonica HOM05D005429 ORTHO05D006697 1.0e-39 167.2 123 68.3
ATR0019G018 Amborella trichopoda HOM05D005429 ORTHO05D006697 1.8e-39 166.4 126 70.6
QL04p071374 Quercus lobata HOM05D005429 ORTHO05D006697 6.8e-39 164.5 102 87.3
MD02G1009700 Malus domestica HOM05D005429 ORTHO05D006697 4.4e-38 161.8 129 69.8
unitig_26.g9672 Utricularia gibba HOM05D005429 ORTHO05D006697 4.4e-38 161.8 129 67.4
Haze_03271 Corylus avellana HOM05D005429 ORTHO05D001402 7.5e-38 161.0 102 84.3
Oeu051694.1 Olea europaea HOM05D005429 ORTHO05D006697 1.7e-37 159.8 110 78.2
Peaxi162Scf00003g04025 Petunia axillaris HOM05D005429 ORTHO05D006697 1.7e-37 159.8 100 86.0
Zm00001eb335330 Zea mays HOM05D005429 ORTHO05D006697 3.7e-37 158.7 123 69.1
Eucgr.C04273 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.8e-36 156.4 96 86.5
Peaxi162Scf03393g00016 Petunia axillaris HOM05D005429 ORTHO05D006697 1.1e-33 147.1 91 86.8
Mapoly0161s0019 Marchantia polymorpha HOM05D005429 ORTHO05D006697 1.6e-32 143.3 120 63.3
Os01g0132700 Oryza sativa ssp. japonica HOM05D005429 ORTHO05D006697 4.7e-32 141.7 123 59.3
Pp3c24_19620 Physcomitrium patens HOM05D005429 ORTHO05D006697 4.7e-32 141.7 125 60.8
Pp3c20_1390 Physcomitrium patens HOM05D005429 ORTHO05D006697 8.0e-32 141.0 123 61.0
Aqoxy3G02314 Aquilegia oxysepala HOM05D005429 ORTHO05D006697 2.9e-29 132.5 83 85.5
SMO141G0142 Selaginella moellendorffii HOM05D005429 ORTHO05D006697 3.2e-28 129.0 124 56.5
AagrBONN_evm.TU.Sc2ySwM_117.1673 Anthoceros agrestis HOM05D005429 ORTHO05D006697 2.3e-26 122.9 121 53.7
CAN.G1618.6 Capsicum annuum HOM05D005429 ORTHO05D006697 6.2e-24 114.8 93 64.5
CAN.G584.55 Capsicum annuum HOM05D005429 ORTHO05D006697 6.2e-24 114.8 93 64.5
Oeu050474.1 Olea europaea HOM05D005429 ORTHO05D006697 1.4e-23 113.6 79 74.7
Eucgr.L02967 Eucalyptus grandis HOM05D005429 ORTHO05D006697 4.4e-22 108.6 101 63.4
Peaxi162Scf03393g00018 Petunia axillaris HOM05D005429 ORTHO05D006697 4.6e-19 98.6 65 78.5
Eucgr.C04269 Eucalyptus grandis HOM05D005429 ORTHO05D006697 6.0e-19 98.2 96 62.5
Zm00001eb228470 Zea mays HOM05D005429 ORTHO05D006697 9.8e-14 80.9 51 74.5
Peaxi162Scf00003g04026 Petunia axillaris HOM05D000011 ORTHO05D011267 3.0e-10 69.3 47 74.5
SGA_v2.0_scaffold19G08613 Striga asiatica HOM05D005429 ORTHO05D006697 6.6e-10 68.2 70 61.4
SGA_v2.0_scaffold19G08607 Striga asiatica HOM05D005429 ORTHO05D006697 8.6e-10 67.8 83 55.4
SGA_v2.0_scaffold711G53500 Striga asiatica HOM05D005429 ORTHO05D006697 8.6e-10 67.8 83 55.4


User provided reference genes

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