Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 1.2e-219 766.1 370 100.0
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 1.9e-172 609.4 373 79.1
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 1.1e-161 573.5 385 73.2
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 1.7e-157 559.7 383 71.3
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 4.9e-157 558.1 392 70.9
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 1.9e-156 556.2 433 65.8
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 5.4e-156 554.7 373 72.4
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 5.1e-154 548.1 366 70.8
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 2.8e-152 542.3 339 77.0
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 1.8e-151 539.7 396 71.2
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 3.4e-150 535.4 374 69.5
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 1.0e-149 533.9 371 68.5
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 1.3e-149 533.5 374 68.7
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 6.5e-149 531.2 376 68.9
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 9.3e-148 527.3 375 70.1
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 1.2e-147 526.9 389 66.6
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 1.3e-146 523.5 372 70.4
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 2.3e-146 522.7 375 67.7
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 3.0e-146 522.3 372 67.7
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 3.9e-146 521.9 367 68.4
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 3.9e-146 521.9 345 73.6
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 4.3e-145 518.5 323 75.2
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 5.7e-145 518.1 343 72.0
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 1.3e-144 516.9 393 65.6
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 4.8e-144 515.0 330 73.3
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 3.1e-143 512.3 364 69.5
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 1.2e-142 510.4 329 71.7
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 2.0e-142 509.6 336 70.5
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 2.6e-142 509.2 364 69.5
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 4.5e-142 508.4 386 65.0
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 5.8e-142 508.1 323 72.8
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 1.3e-141 506.9 372 66.9
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 1.7e-141 506.5 331 72.8
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 1.7e-141 506.5 372 66.7
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 2.2e-141 506.1 336 69.3
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 2.5e-140 502.7 328 73.8
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 7.1e-140 501.1 372 65.9
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 9.3e-140 500.7 337 68.8
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 1.2e-139 500.4 320 73.1
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 1.6e-139 500.0 371 65.5
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 3.5e-139 498.8 329 72.9
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 7.9e-139 497.7 365 67.1
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 1.0e-138 497.3 354 68.9
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.3e-138 496.9 375 65.9
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.9e-138 495.4 389 62.5
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 6.7e-138 494.6 334 71.9
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 1.1e-137 493.8 337 68.2
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 1.5e-137 493.4 376 63.8
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.5e-137 492.7 365 66.6
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 3.3e-137 492.3 375 65.1
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 9.7e-137 490.7 328 70.1
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 9.7e-137 490.7 391 62.4
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 1.3e-136 490.3 362 63.8
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 1.6e-136 490.0 335 69.6
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 2.8e-136 489.2 363 64.2
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 3.7e-136 488.8 320 71.9
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 6.3e-136 488.0 388 65.5
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 6.3e-136 488.0 365 63.8
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 8.2e-136 487.6 339 69.0
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 1.1e-135 487.3 349 66.2
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 1.4e-135 486.9 330 69.1
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.4e-135 486.9 337 67.7
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 1.8e-135 486.5 363 66.4
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.8e-135 486.5 339 68.7
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 2.4e-135 486.1 327 69.4
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.5e-134 483.4 326 71.2
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 1.5e-134 483.4 328 70.4
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 2.0e-134 483.0 369 63.7
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 2.0e-134 483.0 369 63.7
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 3.4e-134 482.3 375 65.6
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 4.5e-134 481.9 403 61.5
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 1.0e-133 480.7 326 70.6
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 2.2e-133 479.6 351 67.2
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.1e-132 477.2 339 67.3
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 1.4e-132 476.9 382 65.2
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 2.5e-132 476.1 329 67.5
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 2.5e-132 476.1 371 64.2
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 5.5e-132 474.9 334 69.5
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 9.4e-132 474.2 332 65.4
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 3.0e-130 469.2 336 69.0
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 1.1e-129 467.2 335 67.2
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 4.3e-129 465.3 342 67.3
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 8.2e-128 461.1 279 77.4
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 1.1e-127 460.7 366 63.4
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 7.7e-126 454.5 297 72.7
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 1.3e-125 453.8 338 61.8
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 1.7e-125 453.4 325 64.6
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 1.1e-124 450.7 272 76.1
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 4.2e-124 448.7 316 65.5
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 1.6e-123 446.8 362 64.4
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 4.7e-123 445.3 329 65.3
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.8e-122 443.4 355 63.7
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 6.7e-122 441.4 282 74.1
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.5e-121 440.3 363 61.4
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 9.7e-121 437.6 333 63.7
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 4.8e-120 435.3 283 70.7
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 1.4e-119 433.7 382 61.3
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 7.0e-119 431.4 373 58.2
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 5.5e-116 421.8 369 61.2
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 1.5e-113 413.7 361 58.7
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 9.1e-111 404.4 336 63.1
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 1.2e-110 404.1 304 64.1
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 2.9e-109 399.4 329 61.1
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 6.5e-109 398.3 397 54.2
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 2.2e-104 383.3 324 59.3
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.7e-101 373.6 334 58.7
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.9e-100 370.2 305 58.7
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 2.2e-96 356.7 304 55.9
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 2.8e-96 356.3 309 59.2
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 1.5e-89 334.0 298 54.7
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 5.0e-85 318.9 236 66.1
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 3.1e-82 309.7 278 55.8
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 9.2e-79 298.1 301 49.5
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 1.2e-78 297.7 246 59.8
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 1.9e-68 263.8 207 59.9
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 6.8e-66 255.4 299 42.5
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.7e-64 250.8 286 41.3
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 2.7e-62 243.4 293 44.0
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 2.2e-56 223.8 302 41.1
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 1.5e-49 201.1 129 74.4
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 1.3e-40 171.4 147 54.4
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 4.8e-35 152.9 90 78.9
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 1.3e-32 144.8 85 74.1
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.8e-29 134.4 199 39.2
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.2e-22 111.7 69 68.1
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 1.8e-13 81.3 70 57.1
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 4.8e-11 73.2 42 73.8
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 6.9e-10 69.3 75 45.3
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.0e-08 65.5 60 50.0


User provided reference genes

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