Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 3.0e-176 621.7 305 100.0
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 5.9e-148 527.7 263 99.2
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 7.0e-125 451.1 275 82.5
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 2.1e-121 439.5 272 79.4
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.0e-120 435.6 278 78.4
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.0e-119 433.0 278 78.1
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 9.8e-119 430.6 242 86.4
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 1.4e-117 426.8 242 85.1
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.8e-117 426.4 275 77.1
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.2e-116 423.7 263 79.5
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 2.0e-116 422.9 254 81.9
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 3.5e-116 422.2 267 77.5
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 4.5e-116 421.8 267 77.5
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 5.9e-116 421.4 278 75.2
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 7.7e-116 421.0 275 77.5
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 7.7e-116 421.0 267 77.5
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.3e-115 420.2 269 77.0
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 2.3e-115 419.5 267 76.4
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 2.9e-115 419.1 255 79.6
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 1.1e-114 417.2 267 76.4
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.5e-114 416.8 247 82.2
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.5e-114 416.0 255 81.6
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 2.5e-114 416.0 281 77.9
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 3.3e-114 415.6 257 78.2
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 9.5e-114 414.1 244 82.0
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 2.8e-113 412.5 257 78.6
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.0e-112 410.6 268 75.4
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 1.4e-112 410.2 258 76.4
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.5e-111 406.8 257 79.0
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 3.4e-111 405.6 259 75.7
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 4.4e-111 405.2 259 75.3
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 4.4e-111 405.2 265 74.7
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 9.8e-111 404.1 268 73.1
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 1.3e-110 403.7 256 77.7
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 1.3e-110 403.7 256 77.7
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.7e-110 403.3 265 74.0
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.2e-110 402.9 275 70.2
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.9e-110 402.5 263 74.9
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.7e-110 402.1 275 70.2
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 3.7e-110 402.1 275 74.5
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 4.9e-110 401.7 265 73.2
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 6.4e-110 401.4 269 74.7
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 1.1e-109 400.6 299 68.9
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.1e-109 400.6 267 73.0
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.1e-109 400.6 269 75.5
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.4e-109 400.2 267 73.8
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.4e-109 400.2 267 73.8
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.4e-109 400.2 244 79.9
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.4e-109 400.2 272 72.1
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 2.4e-109 399.4 267 76.0
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.4e-109 399.4 265 73.2
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 3.2e-109 399.1 244 79.1
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.4e-109 398.3 267 73.4
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 5.4e-109 398.3 263 73.4
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 5.4e-109 398.3 254 77.2
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 5.4e-109 398.3 255 78.0
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 9.2e-109 397.5 277 70.0
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.2e-108 397.1 249 77.9
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.2e-108 397.1 272 71.7
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.6e-108 396.7 267 73.0
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 2.0e-108 396.4 258 75.6
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 2.7e-108 396.0 263 76.0
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.5e-106 390.2 255 74.5
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.5e-106 390.2 270 71.5
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.9e-106 389.8 258 75.2
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 2.5e-106 389.4 258 74.4
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.3e-106 389.0 288 66.7
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 4.3e-106 388.7 263 71.9
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 5.6e-106 388.3 287 68.3
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 9.5e-106 387.5 254 74.4
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 9.5e-106 387.5 258 74.4
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.2e-105 387.1 258 74.4
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.2e-105 387.1 258 74.4
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.0e-104 384.0 254 73.2
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.4e-104 383.6 244 76.6
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.8e-104 383.3 245 73.5
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 2.3e-104 382.9 257 73.2
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 2.3e-104 382.9 242 75.6
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 2.3e-104 382.9 249 74.7
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 4.0e-104 382.1 270 68.9
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.2e-103 380.6 267 71.5
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 2.0e-103 379.8 258 71.3
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 2.0e-103 379.8 263 69.2
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 2.0e-103 379.8 263 69.2
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 2.6e-103 379.4 325 60.0
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 3.4e-103 379.0 260 69.2
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.4e-103 378.6 244 75.8
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.4e-103 378.6 244 76.2
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.3e-102 377.1 257 72.0
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 1.7e-102 376.7 270 68.5
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.2e-102 376.3 244 75.8
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 2.9e-102 375.9 267 69.3
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 8.3e-102 374.4 250 70.4
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 2.4e-101 372.9 385 56.1
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 6.0e-100 368.2 242 71.5
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 1.5e-98 363.6 279 66.7
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 9.5e-98 360.9 257 67.7
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 6.2e-97 358.2 265 67.9
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 8.1e-97 357.8 246 68.3
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 5.8e-95 351.7 243 68.7
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 6.4e-94 348.2 251 68.5
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 1.3e-91 340.5 257 66.1
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 3.9e-91 339.0 261 62.1
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 2.6e-87 326.2 244 65.2
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 9.9e-87 324.3 253 62.8
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 4.9e-86 322.0 265 59.6
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 6.0e-84 315.1 252 61.5
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 5.6e-82 308.5 241 60.6
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.1e-80 304.3 260 57.3
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 3.3e-74 282.7 264 52.3
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 6.2e-73 278.5 179 74.3
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 1.4e-72 277.3 245 60.0
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 5.3e-72 275.4 171 79.5
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 3.2e-69 266.2 168 79.8
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 5.6e-66 255.4 277 51.6
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 2.8e-65 253.1 258 53.5
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 9.0e-64 248.1 176 72.2
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 2.5e-58 229.9 247 52.6
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 1.8e-48 197.2 262 43.5
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.3e-46 191.0 128 72.7
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.6e-34 150.2 98 71.4
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 5.9e-31 139.0 99 63.6
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 5.5e-29 132.5 91 70.3
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 1.7e-25 120.9 85 65.9
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 4.0e-11 73.2 96 45.8
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 4.4e-10 69.7 41 78.0
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 4.5e-07 59.7 211 31.8


User provided reference genes

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