Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 5.9e-166 587.4 287 100.0
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 5.5e-148 527.7 263 99.2
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.1e-132 476.9 281 84.0
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.0e-130 470.3 277 81.6
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 4.4e-129 464.9 282 81.2
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 9.8e-129 463.8 261 85.4
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.9e-128 462.2 282 80.9
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.6e-126 456.4 282 78.7
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.6e-126 456.4 273 81.0
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 2.0e-126 456.1 273 80.6
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 2.0e-126 456.1 261 83.9
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.3e-125 453.4 281 79.4
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 2.3e-125 452.6 273 79.5
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 5.0e-125 451.4 273 79.5
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.5e-124 449.9 273 79.9
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 1.9e-124 449.5 281 79.4
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 2.5e-124 449.1 275 80.0
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 7.3e-124 447.6 261 82.0
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.2e-123 446.8 263 81.7
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.6e-123 446.4 281 78.3
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 2.1e-123 446.0 273 78.4
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 2.1e-123 446.0 299 77.3
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.8e-123 445.7 273 81.3
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 3.6e-123 445.3 265 80.0
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.8e-122 443.0 273 78.0
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 8.9e-122 440.7 265 78.5
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 2.9e-120 435.6 265 80.0
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 6.4e-120 434.5 281 73.0
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.1e-119 433.7 281 73.0
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.1e-119 433.7 270 78.1
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.4e-119 433.3 271 77.5
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.9e-119 433.0 275 78.2
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 5.4e-119 431.4 271 76.8
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 9.2e-119 430.6 304 71.1
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 9.2e-119 430.6 273 76.6
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.2e-118 430.3 281 73.7
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.6e-118 429.9 271 76.0
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 2.1e-118 429.5 259 78.8
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.7e-118 429.1 259 78.8
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 2.7e-118 429.1 274 75.2
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.5e-118 428.7 273 76.2
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 3.5e-118 428.7 269 77.0
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 4.6e-118 428.3 273 76.6
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 6.0e-118 427.9 262 79.0
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 6.0e-118 427.9 262 79.0
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 7.8e-118 427.6 271 76.0
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.0e-117 427.2 273 75.8
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.3e-117 426.8 273 77.7
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 3.0e-117 425.6 268 76.9
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 3.0e-117 425.6 281 75.4
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 5.1e-117 424.9 275 76.0
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 8.6e-117 424.1 262 77.5
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.1e-116 423.7 275 76.0
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 1.9e-116 422.9 264 77.3
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.9e-116 422.9 273 76.2
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 1.9e-116 422.9 261 78.2
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.9e-116 422.9 273 76.9
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 3.3e-116 422.2 262 77.5
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 7.3e-116 421.0 262 77.1
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.6e-115 419.9 262 77.9
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 1.6e-115 419.9 260 78.1
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 2.8e-115 419.1 262 76.0
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.1e-114 417.2 294 69.4
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.8e-114 416.4 264 76.9
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.8e-114 416.4 264 75.8
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 2.3e-114 416.0 264 76.1
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 5.2e-114 414.8 283 71.4
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 8.9e-114 414.1 264 76.1
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.2e-113 413.7 264 76.1
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.2e-113 413.7 264 76.1
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.2e-113 413.7 261 75.9
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 2.6e-113 412.5 293 70.3
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 2.2e-112 409.5 263 74.9
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 2.9e-112 409.1 255 76.9
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 2.9e-112 409.1 279 69.2
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 3.7e-112 408.7 276 71.4
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 6.4e-112 407.9 261 75.1
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 8.3e-112 407.5 268 73.9
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 8.3e-112 407.5 257 77.0
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.1e-111 407.1 260 76.2
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.1e-111 407.1 331 63.1
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 1.9e-111 406.4 264 73.1
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.4e-111 406.0 263 74.9
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 2.4e-111 406.0 280 69.3
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 2.4e-111 406.0 280 69.3
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 9.2e-111 404.1 263 71.5
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.2e-110 403.7 263 73.8
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.6e-110 403.3 263 71.1
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.5e-110 402.1 260 75.4
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.5e-110 402.1 260 75.8
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 6.0e-110 401.4 391 57.8
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 1.0e-109 400.6 273 69.6
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.3e-109 400.2 278 69.8
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.7e-109 399.8 260 75.4
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 8.1e-107 391.0 285 69.1
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 3.4e-105 385.6 260 69.2
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 4.4e-105 385.2 281 68.0
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 2.2e-104 382.9 271 66.1
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 8.4e-104 380.9 263 69.6
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.9e-100 369.8 266 66.2
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 3.3e-100 369.0 271 68.6
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 5.6e-100 368.2 270 67.4
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 7.3e-100 367.9 280 62.1
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 2.7e-94 349.4 258 65.1
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 9.6e-92 340.9 267 62.2
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 9.0e-90 334.3 283 58.3
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 8.7e-85 317.8 252 61.9
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 4.3e-84 315.5 245 60.8
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 2.1e-83 313.2 261 58.2
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 3.8e-80 302.4 198 73.2
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 1.9e-79 300.1 177 81.9
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 2.5e-79 299.7 267 58.8
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 4.6e-78 295.4 265 53.2
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 2.5e-76 289.7 283 55.5
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 7.4e-76 288.1 171 83.0
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 2.6e-73 279.6 264 55.7
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 7.9e-70 268.1 196 70.4
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 8.2e-67 258.1 263 54.4
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.0e-53 214.5 134 75.4
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 3.1e-50 203.0 292 41.4
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.4e-36 156.4 98 73.5
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 1.1e-31 141.4 91 70.3
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 6.1e-30 135.6 91 71.4
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 1.6e-25 120.9 85 65.9
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 2.2e-11 73.9 91 46.2
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 4.1e-10 69.7 41 78.0
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 2.1e-06 57.4 172 33.1


User provided reference genes

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