Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.4e-72 276.2 136 100.0
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.6e-60 236.1 137 84.7
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.6e-60 236.1 137 84.7
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.5e-60 235.0 137 83.9
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.5e-60 235.0 137 83.9
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 6.0e-60 234.2 137 82.5
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 7.8e-60 233.8 137 82.5
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 8.7e-59 230.3 137 82.5
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 5.6e-58 227.6 137 81.8
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 9.6e-58 226.9 136 79.4
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 9.6e-58 226.9 137 81.8
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 3.6e-57 224.9 137 81.0
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.4e-56 223.0 137 81.0
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.4e-56 222.2 138 80.4
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 9.0e-56 220.3 137 78.1
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 5.8e-55 217.6 137 77.4
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 9.9e-55 216.9 138 79.7
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.3e-54 216.5 137 76.6
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.3e-54 216.5 137 76.6
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.3e-54 216.5 137 78.1
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 1.7e-54 216.1 137 76.6
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 4.9e-54 214.5 137 78.1
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 4.9e-54 214.5 137 75.9
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.4e-53 212.2 137 74.5
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.2e-52 209.9 138 76.1
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.7e-52 208.8 136 73.5
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.7e-52 208.8 138 73.9
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 3.5e-52 208.4 137 75.9
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.5e-52 208.4 136 73.5
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 4.6e-52 208.0 136 73.5
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 7.8e-52 207.2 137 76.6
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.0e-51 206.8 139 73.4
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 2.3e-51 205.7 137 72.3
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 2.3e-51 205.7 140 72.1
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 2.3e-51 205.7 137 73.7
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.9e-51 204.9 140 72.9
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 3.9e-51 204.9 136 72.1
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 6.6e-51 204.1 140 73.6
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 8.7e-51 203.8 136 71.3
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.1e-50 203.4 140 70.0
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.9e-50 202.6 136 70.6
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 1.9e-50 202.6 136 72.1
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.5e-50 202.2 138 72.5
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 2.5e-50 202.2 138 71.7
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 7.3e-50 200.7 138 73.9
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.3e-49 199.9 136 71.3
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.6e-49 199.5 136 69.9
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.6e-49 199.5 136 69.1
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.1e-49 199.1 136 69.9
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 2.1e-49 199.1 136 69.1
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 3.6e-49 198.4 136 69.1
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 4.8e-49 198.0 136 72.1
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 4.8e-49 198.0 136 70.6
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 6.2e-49 197.6 138 71.0
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 8.1e-49 197.2 136 71.3
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 8.1e-49 197.2 136 71.3
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 8.1e-49 197.2 136 67.6
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 8.1e-49 197.2 136 67.6
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 3.1e-48 195.3 137 73.7
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 5.3e-48 194.5 137 72.3
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.2e-47 193.4 140 65.7
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.6e-47 192.2 137 68.6
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.6e-47 192.2 137 68.6
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 3.4e-47 191.8 136 66.2
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 9.9e-47 190.3 137 72.3
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.7e-46 189.5 136 65.4
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 2.2e-46 189.1 122 73.0
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 3.2e-45 185.3 137 68.6
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 4.2e-45 184.9 137 69.3
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 9.3e-45 183.7 137 65.7
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 9.3e-45 183.7 136 67.6
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 9.3e-45 183.7 136 64.7
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.2e-44 183.3 137 67.9
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.2e-44 183.3 136 64.7
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 1.2e-44 183.3 136 64.0
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.6e-44 183.0 137 63.5
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.6e-44 183.0 138 63.8
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.6e-44 183.0 136 65.4
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 2.1e-44 182.6 137 66.4
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.5e-44 181.8 136 66.9
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.5e-44 181.8 136 66.9
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 3.5e-44 181.8 137 67.9
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.6e-44 181.4 136 66.2
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 4.6e-44 181.4 141 65.2
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 7.9e-44 180.6 137 67.9
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 3.0e-43 178.7 136 66.2
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 5.1e-43 177.9 140 65.0
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.1e-42 176.8 139 69.1
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.5e-42 176.4 140 64.3
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 3.3e-42 175.3 139 63.3
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 7.4e-42 174.1 136 61.8
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 3.7e-41 171.8 136 61.0
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 3.7e-41 171.8 148 58.8
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 1.1e-40 170.2 148 57.4
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 1.8e-40 169.5 139 61.9
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 2.4e-40 169.1 136 57.4
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 6.9e-40 167.5 139 61.2
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 6.9e-40 167.5 139 61.2
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 9.0e-40 167.2 139 61.2
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 9.0e-40 167.2 139 61.2
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 9.0e-40 167.2 139 59.7
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 9.0e-40 167.2 138 60.9
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.2e-39 166.8 139 61.2
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.5e-39 166.4 139 59.7
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.0e-39 166.0 136 60.3
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 5.8e-39 164.5 139 60.4
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 5.8e-39 164.5 139 59.7
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 7.6e-39 164.1 139 60.4
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 7.1e-37 157.5 136 58.1
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 2.5e-34 149.1 136 50.0
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.3e-33 146.7 143 51.7
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 2.1e-28 129.4 136 44.9
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.0e-27 127.1 139 40.3
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.7e-27 124.4 136 44.1
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 9.0e-24 114.0 136 49.3
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 4.2e-13 78.6 111 41.4


User provided reference genes

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