Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40981 Davidia involucrata HOM05D004632 ORTHO05D005556 4.4e-149 531.2 255 100.0
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 7.5e-72 274.6 314 54.8
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 1.1e-67 260.8 279 57.7
Oeu013659.1 Olea europaea HOM05D004632 ORTHO05D005556 2.2e-63 246.5 296 51.7
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 2.9e-63 246.1 314 50.0
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 2.4e-62 243.0 279 55.6
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.6e-61 240.4 271 55.7
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 1.6e-61 240.4 279 53.0
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 2.0e-61 240.0 279 53.0
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 2.0e-61 240.0 287 52.6
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 4.6e-61 238.8 278 53.6
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 6.0e-61 238.4 279 53.4
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 1.3e-60 237.3 279 53.0
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 3.0e-60 236.1 280 52.5
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 3.9e-60 235.7 278 52.9
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 3.9e-60 235.7 279 52.7
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 6.6e-60 235.0 279 52.0
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 2.5e-59 233.0 278 51.8
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 9.5e-59 231.1 279 51.3
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 1.6e-58 230.3 279 51.3
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 2.1e-58 229.9 276 52.5
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 2.8e-58 229.6 278 52.2
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 4.7e-58 228.8 279 52.7
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 6.2e-58 228.4 275 52.0
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 6.2e-58 228.4 281 52.0
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 1.1e-57 227.6 279 50.2
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 1.4e-57 227.3 279 50.9
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 2.3e-57 226.5 279 50.9
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 3.1e-57 226.1 280 50.7
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 6.8e-57 224.9 256 53.5
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 6.8e-57 224.9 268 52.6
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 1.2e-56 224.2 282 51.4
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 2.0e-56 223.4 253 53.0
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 2.0e-56 223.4 279 51.3
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 5.8e-56 221.9 277 50.9
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 7.5e-56 221.5 278 50.0
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 7.5e-56 221.5 278 51.1
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 9.8e-56 221.1 280 51.4
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 9.8e-56 221.1 278 51.1
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 9.8e-56 221.1 279 50.9
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 9.8e-56 221.1 280 49.3
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 2.2e-55 219.9 278 50.4
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 2.9e-55 219.5 278 50.0
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 2.9e-55 219.5 276 51.1
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 2.9e-55 219.5 278 50.4
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 3.7e-55 219.2 286 50.0
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 4.9e-55 218.8 269 51.7
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 6.4e-55 218.4 279 49.5
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 6.4e-55 218.4 279 49.8
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 6.4e-55 218.4 280 50.7
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 8.3e-55 218.0 279 50.2
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 8.3e-55 218.0 278 49.3
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.1e-54 217.6 248 53.6
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 1.4e-54 217.2 279 49.5
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 1.4e-54 217.2 278 48.9
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 1.9e-54 216.9 279 50.2
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 1.9e-54 216.9 316 45.3
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 2.4e-54 216.5 279 50.2
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 2.4e-54 216.5 293 48.8
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 3.2e-54 216.1 294 48.6
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 4.1e-54 215.7 279 49.5
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 5.4e-54 215.3 274 49.3
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 5.4e-54 215.3 279 49.8
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 7.1e-54 214.9 279 49.5
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 3.5e-53 212.6 262 51.1
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 6.0e-53 211.8 279 48.7
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 7.8e-53 211.5 278 48.9
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 7.8e-53 211.5 279 49.1
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 1.3e-52 210.7 280 48.2
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.3e-52 209.9 279 48.4
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 3.0e-52 209.5 280 49.3
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 1.9e-51 206.8 278 48.2
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 9.5e-51 204.5 279 48.0
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 1.6e-50 203.8 279 47.7
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.4e-49 200.7 270 50.7
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 2.0e-48 196.8 279 45.2
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 5.8e-48 195.3 265 47.9
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 9.9e-48 194.5 273 46.5
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 1.3e-47 194.1 278 46.4
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 1.7e-47 193.7 279 46.2
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 1.7e-47 193.7 267 46.8
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 1.7e-47 193.7 280 46.4
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 3.7e-47 192.6 279 44.8
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 6.4e-47 191.8 273 46.5
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 8.3e-47 191.4 301 43.9
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 5.4e-46 188.7 285 46.0
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 5.4e-46 188.7 278 45.3
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 7.1e-46 188.3 278 47.8
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 7.1e-46 188.3 278 44.2
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 1.2e-45 187.6 274 45.6
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 1.6e-45 187.2 277 46.6
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 1.6e-45 187.2 277 46.6
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 1.6e-45 187.2 279 44.1
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 1.0e-44 184.5 279 45.2
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 1.3e-44 184.1 280 44.3
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 1.3e-44 184.1 274 45.3
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 1.7e-44 183.7 279 45.5
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 3.9e-44 182.6 276 44.2
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 3.9e-44 182.6 276 43.8
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 3.9e-44 182.6 276 43.8
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 8.6e-44 181.4 279 43.7
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 7.3e-43 178.3 375 36.0
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 1.6e-42 177.2 271 44.6
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 1.6e-42 177.2 271 44.6
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 3.6e-42 176.0 321 40.8
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 4.7e-42 175.6 275 45.1
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 3.1e-41 172.9 273 45.1
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 4.0e-33 146.0 260 41.9
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 1.2e-32 144.4 310 35.5
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 2.2e-31 140.2 156 56.4
COL.COLO4_18941 Corchorus olitorius HOM05D004632 ORTHO05D005556 3.8e-31 139.4 167 51.5
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 3.8e-31 139.4 287 34.1
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 9.3e-30 134.8 162 51.2
Actinidia10511 Actinidia chinensis HOM05D004632 ORTHO05D005556 5.6e-27 125.6 170 46.5
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 7.3e-27 125.2 270 34.4
Zm00001eb259920 Zea mays HOM05D004632 ORTHO05D005556 8.1e-26 121.7 148 50.0
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 3.1e-25 119.8 180 43.3
VMungo1309G1582 Vigna mungo HOM05D004632 ORTHO05D005556 9.0e-25 118.2 146 48.6
MD15G1039000 Malus domestica HOM05D004632 ORTHO05D005556 3.4e-24 116.3 140 50.0
Hma1.2p1_0059F.1_g032640 Hydrangea macrophylla HOM05D004632 ORTHO05D005556 4.5e-24 115.9 68 82.4
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 5.8e-24 115.5 281 32.4
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 7.6e-24 115.2 268 35.4
SEGI_29407 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 1.4e-22 110.9 78 62.8
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 4.2e-22 109.4 120 53.3
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 7.9e-21 105.1 307 30.6
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.5e-19 100.1 78 62.8
Actinidia09762 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.7e-18 96.3 52 88.5
Sabra18G0022500 Salix brachista HOM05D004632 ORTHO05D005556 4.0e-17 92.8 311 32.2
CDE05G3588 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 1.1e-11 74.7 130 36.9
Dinv40325 Davidia involucrata HOM05D004632 ORTHO05D005556 1.9e-11 73.9 37 94.6
AagrBONN_evm.TU.Sc2ySwM_228.3176 Anthoceros agrestis HOM05D003428 ORTHO05D004131 7.4e-11 72.0 142 32.4
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 1.6e-10 70.9 60 63.3
SEGI_30848 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 1.6e-10 70.9 57 57.9
Actinidia36729 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.1e-09 68.2 96 46.9
CBR_g39739 Chara braunii HOM05D004632 ORTHO05D005556 1.4e-09 67.8 49 61.2
Cfa022837 Carpinus fangiana HOM05D004632 ORTHO05D005556 2.5e-06 57.0 70 44.3
CBR_g19035 Chara braunii HOM05D024635 ORTHO05D026692 5.5e-06 55.8 91 35.2
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 9.3e-06 55.1 282 26.6


User provided reference genes

Program Settings