Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40948 Davidia involucrata HOM05D000082 ORTHO05D007743 3.9e-45 184.5 97 100.0
Actinidia01322 Actinidia chinensis HOM05D000082 ORTHO05D007743 6.6e-37 157.1 95 83.2
Rhsim12G0139000 Rhododendron simsii HOM05D000082 ORTHO05D007743 3.6e-35 151.4 96 80.2
CSS0031449 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D007743 4.0e-34 147.9 95 78.9
vmacro16415 Vaccinium macrocarpon HOM05D000082 ORTHO05D007743 2.0e-33 145.6 96 78.1
Hma1.2p1_0920F.1_g236580 Hydrangea macrophylla HOM05D000082 ORTHO05D007743 3.4e-33 144.8 93 77.4
Manes.16G088000 Manihot esculenta HOM05D000082 ORTHO05D007743 1.3e-32 142.9 95 75.8
Nn8g38527 Nelumbo nucifera HOM05D000082 ORTHO05D007743 1.3e-32 142.9 94 76.6
Peaxi162Scf00922g00002 Petunia axillaris HOM05D000082 ORTHO05D007743 6.4e-32 140.6 92 76.1
Lsat_1_v5_gn_7_59260 Lactuca sativa HOM05D000082 ORTHO05D007743 8.4e-32 140.2 95 71.6
TAR624G0119 Trochodendron aralioides HOM05D000082 ORTHO05D007743 5.4e-31 137.5 95 71.6
Sopen08g021220 Solanum pennellii HOM05D000082 ORTHO05D007743 9.3e-31 136.7 92 73.9
Solyc08g067290.3 Solanum lycopersicum HOM05D000082 ORTHO05D007743 1.6e-30 136.0 92 73.9
PGSC0003DMG400007377 Solanum tuberosum HOM05D000082 ORTHO05D007743 1.6e-30 136.0 92 73.9
PSO724G0255 Papaver somniferum HOM05D000082 ORTHO05D007743 2.1e-30 135.6 94 72.3
Nitab4.5_0009154g0010 Nicotiana tabacum HOM05D000082 ORTHO05D007743 3.5e-30 134.8 93 72.0
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 3.5e-30 134.8 95 68.4
Cfa017843 Carpinus fangiana HOM05D000082 ORTHO05D007743 6.0e-30 134.0 92 70.7
HanXRQChr09g0248291 Helianthus annuus HOM05D000082 ORTHO05D007743 7.9e-30 133.7 92 71.7
Haze_18365 Corylus avellana HOM05D000082 ORTHO05D007743 1.0e-29 133.3 92 69.6
Psat6g024320 Pisum sativum HOM05D000082 ORTHO05D007743 1.0e-29 133.3 95 68.4
Aqoxy7G04170 Aquilegia oxysepala HOM05D000082 ORTHO05D007743 1.3e-29 132.9 94 71.3
TPR.G38904 Trifolium pratense HOM05D000082 ORTHO05D007743 1.8e-29 132.5 95 67.4
Ca_13085_v3 Cicer arietinum L. HOM05D000082 ORTHO05D007743 2.3e-29 132.1 95 66.3
PSO135G0672 Papaver somniferum HOM05D000082 ORTHO05D007743 3.0e-29 131.7 94 71.3
Migut.E01466 Erythranthe guttata HOM05D000082 ORTHO05D007743 3.9e-29 131.3 95 66.3
Lj5g0022807 Lotus japonicus HOM05D000082 ORTHO05D007743 3.9e-29 131.3 95 69.5
Lalb_Chr24g0393731 Lupinus albus HOM05D000082 ORTHO05D007743 5.1e-29 131.0 95 68.4
Atru.chr7.1811 Acer truncatum HOM05D000082 ORTHO05D007743 8.7e-29 130.2 94 68.1
DCAR_004369 Daucus carota HOM05D000082 ORTHO05D007743 1.1e-28 129.8 92 68.5
arahy.Tifrunner.gnm1.ann1.9Z4RH8 Arachis hypogaea HOM05D000082 ORTHO05D007743 1.5e-28 129.4 95 67.4
arahy.Tifrunner.gnm1.ann1.GHB8SH Arachis hypogaea HOM05D000082 ORTHO05D007743 1.5e-28 129.4 95 67.4
Potri.006G217600 Populus trichocarpa HOM05D000082 ORTHO05D007743 2.5e-28 128.6 94 67.0
Glyma.14G105900 Glycine max HOM05D000082 ORTHO05D007743 3.3e-28 128.3 95 65.3
MSTRG.1634 Avicennia marina HOM05D000082 ORTHO05D007743 4.3e-28 127.9 95 64.2
CiPaw.16G071800 Carya illinoinensis HOM05D000082 ORTHO05D007743 4.3e-28 127.9 92 68.5
unitig_0.g2182 Utricularia gibba HOM05D000082 ORTHO05D007743 5.6e-28 127.5 95 65.3
Eucgr.C03179 Eucalyptus grandis HOM05D000082 ORTHO05D007743 9.6e-28 126.7 96 68.8
Gohir.A06G081400 Gossypium hirsutum HOM05D000082 ORTHO05D007743 1.3e-27 126.3 93 68.8
Sabra06G0167800 Salix brachista HOM05D000082 ORTHO05D007743 1.3e-27 126.3 94 66.0
COL.COLO4_21172 Corchorus olitorius HOM05D000082 ORTHO05D007743 1.6e-27 125.9 94 69.1
Medtr1g014710 Medicago truncatula HOM05D000082 ORTHO05D007743 1.6e-27 125.9 95 65.3
Phvul.001G043900 Phaseolus vulgaris HOM05D000082 ORTHO05D007743 1.6e-27 125.9 95 67.4
Ciclev10008969m.g Citrus clementina HOM05D000082 ORTHO05D007743 3.7e-27 124.8 95 63.2
VMungo0647G2039 Vigna mungo HOM05D000082 ORTHO05D007743 3.7e-27 124.8 95 66.3
PGR044G1353 Punica granatum HOM05D000082 ORTHO05D007743 6.2e-27 124.0 94 63.8
Cpa.g.sc82.22 Carica papaya HOM05D000082 ORTHO05D007743 8.1e-27 123.6 94 67.0
Duzib150G1135 Durio zibethinus HOM05D000082 ORTHO05D007743 1.1e-26 123.2 94 68.1
Gorai.010G094400 Gossypium raimondii HOM05D000082 ORTHO05D007743 1.1e-26 123.2 93 68.8
MBI13_g01682_MAGBIO Magnolia biondii HOM05D000082 ORTHO05D007743 1.1e-26 123.2 97 64.9
Thecc.09G066800 Theobroma cacao HOM05D000082 ORTHO05D007743 1.4e-26 122.9 95 65.3
Glyma.17G220500 Glycine max HOM05D000082 ORTHO05D007743 1.8e-26 122.5 95 63.2
Gohir.D06G081000 Gossypium hirsutum HOM05D000082 ORTHO05D007743 2.4e-26 122.1 93 67.7
TWI63G0835 Tripterygium wilfordii HOM05D000082 ORTHO05D007743 2.4e-26 122.1 95 63.2
Sc25g0004450 Simmondsia chinensis HOM05D000082 ORTHO05D007743 3.1e-26 121.7 95 63.2
THA.LOC104810973 Tarenaya hassleriana HOM05D000082 ORTHO05D007743 9.0e-26 120.2 94 63.8
ClCG05G015970 Citrullus lanatus HOM05D000082 ORTHO05D007743 2.0e-25 119.0 94 61.7
GSVIVG01035510001 Vitis vinifera HOM05D000082 ORTHO05D007743 1.3e-24 116.3 81 71.6
BcaNung05757 Brassica carinata HOM05D000082 ORTHO05D007743 2.2e-24 115.5 93 63.4
A03p10340 Brassica napus HOM05D000278 ORTHO05D004673 2.2e-24 115.5 93 63.4
C03p11870 Brassica napus HOM05D000278 ORTHO05D004673 2.2e-24 115.5 93 63.4
CANSAT25G3535 Cannabis sativa HOM05D000082 ORTHO05D007743 2.9e-24 115.2 93 55.9
Sp6g23610 Schrenkiella parvula HOM05D000082 ORTHO05D007743 4.9e-24 114.4 93 63.4
AL6G32470 Arabidopsis lyrata HOM05D000082 ORTHO05D007743 6.4e-24 114.0 93 62.4
Thhalv10014170m.g Eutrema salsugineum HOM05D000082 ORTHO05D007743 6.4e-24 114.0 93 63.4
ATR0099G001 Amborella trichopoda HOM05D000082 ORTHO05D007743 8.4e-24 113.6 94 60.6
AT5G20910 Arabidopsis thaliana HOM05D000082 ORTHO05D007743 1.1e-23 113.2 93 62.4
Sed0005903 Sechium edule HOM05D000082 ORTHO05D007743 1.1e-23 113.2 95 61.1
CARHR191940 Cardamine hirsuta HOM05D000082 ORTHO05D007743 4.2e-23 111.3 93 62.4
Peaxi162Scf00251g00411 Petunia axillaris HOM05D000082 ORTHO05D007743 5.5e-23 110.9 122 51.6
HPP92_002370 Vanilla planifolia HOM05D000082 ORTHO05D007743 5.5e-23 110.9 95 62.1
HPP92_027597 Vanilla planifolia HOM05D000082 ORTHO05D007743 5.5e-23 110.9 95 62.1
Carub.0006s1920 Capsella rubella HOM05D000082 ORTHO05D007743 9.3e-23 110.2 92 60.9
Cc08_g07820 Coffea canephora HOM05D000082 ORTHO05D007743 9.3e-23 110.2 73 71.2
Aa31LG1G13850 Aethionema arabicum HOM05D000082 ORTHO05D007743 3.5e-22 108.2 93 61.3
ECA240G1377 Erigeron canadensis HOM05D000082 ORTHO05D007743 7.9e-22 107.1 73 71.2
Prupe.1G401200 Prunus persica HOM05D006336 ORTHO05D007819 7.9e-22 107.1 91 57.1
MD08G1045700 Malus domestica HOM05D000082 ORTHO05D007743 1.3e-21 106.3 91 57.1
MD15G1046800 Malus domestica HOM05D000082 ORTHO05D007743 1.8e-21 105.9 91 57.1
GSVIVG01035508001 Vitis vinifera HOM05D000082 ORTHO05D007743 6.7e-21 104.0 73 68.5
MD08G1045000 Malus domestica HOM05D000082 ORTHO05D007743 8.7e-21 103.6 82 61.0
SEGI_35365 Sequoiadendron giganteum HOM05D000082 ORTHO05D007743 2.5e-20 102.1 95 48.4
Os09g0434200 Oryza sativa ssp. japonica HOM05D000082 ORTHO05D007743 3.3e-20 101.7 95 50.5
MELO3C016933.2 Cucumis melo HOM05D000082 ORTHO05D007743 9.6e-20 100.1 95 51.6
CsaV3_4G036260 Cucumis sativus L. HOM05D000082 ORTHO05D007743 6.2e-19 97.4 95 49.5
EL10As3g23312 Beta vulgaris HOM05D000082 ORTHO05D007743 8.2e-19 97.1 93 53.8
RcHm_v2.0_Chr6g0304721 Rosa chinensis HOM05D000082 ORTHO05D007743 4.0e-18 94.7 91 50.5
FvH4_2g37060 Fragaria vesca HOM05D000082 ORTHO05D007743 9.0e-18 93.6 96 52.1
FAN06G3381 Fragaria x ananassa HOM05D000082 ORTHO05D007743 9.0e-18 93.6 96 52.1
FAN10G1603 Fragaria x ananassa HOM05D000287 ORTHO05D007743 9.0e-18 93.6 96 52.1
FAN21G1538 Fragaria x ananassa HOM05D000082 ORTHO05D007743 9.0e-18 93.6 96 52.1
FAN25G1293 Fragaria x ananassa HOM05D000082 ORTHO05D007743 9.0e-18 93.6 96 52.1
FAN06G0753 Fragaria x ananassa HOM05D000082 ORTHO05D007743 1.2e-17 93.2 96 51.0
FAN07G0416 Fragaria x ananassa HOM05D000116 ORTHO05D007743 3.4e-17 91.7 91 51.6
AUR62038171 Chenopodium quinoa HOM05D000082 ORTHO05D007743 4.5e-17 91.3 92 50.0
AUR62038076 Chenopodium quinoa HOM05D000082 ORTHO05D007743 5.8e-17 90.9 92 50.0
FAN21G0679 Fragaria x ananassa HOM05D000082 ORTHO05D007743 5.8e-17 90.9 96 50.0
Nitab4.5_0015655g0010 Nicotiana tabacum HOM05D000082 ORTHO05D007743 3.5e-14 81.6 46 80.4
AagrBONN_evm.TU.Sc2ySwM_344.4009 Anthoceros agrestis HOM05D000082 ORTHO05D007743 6.0e-14 80.9 93 41.9
Aqoxy7G00970 Aquilegia oxysepala HOM05D000082 ORTHO05D007743 6.0e-14 80.9 89 43.8
Lj7C205T1 Lonicera japonica HOM05D000082 ORTHO05D007743 1.8e-13 79.3 46 78.3
FAN23G0804 Fragaria x ananassa HOM05D000082 ORTHO05D007743 4.3e-12 74.7 93 46.2
SMO011G0034 Selaginella moellendorffii HOM05D000082 ORTHO05D007743 7.4e-12 73.9 82 41.5
AagrBONN_evm.TU.Sc2ySwM_344.4006 Anthoceros agrestis HOM05D000082 ORTHO05D007743 1.1e-10 70.1 94 36.2
CBR_g17961 Chara braunii HOM05D000082 ORTHO05D007743 2.4e-10 68.9 85 37.6
Mapoly0027s0101 Marchantia polymorpha HOM05D000082 ORTHO05D007743 3.1e-10 68.6 82 39.0
Zm00001eb099970 Zea mays HOM05D000082 ORTHO05D007743 4.1e-10 68.2 45 64.4
Pp3c1_42450 Physcomitrium patens HOM05D000082 ORTHO05D007743 1.7e-08 62.8 96 35.4
Pp3c1_5780 Physcomitrium patens HOM05D000082 ORTHO05D310223 2.7e-06 55.5 92 33.7
Aqoxy1G01834 Aquilegia oxysepala HOM05D000082 ORTHO05D007743 6.1e-06 54.3 84 34.5


User provided reference genes

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