Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40756 Davidia involucrata HOM05D009493 ORTHO05D010864 3.6e-278 961.1 532 100.0
CSS0039535 Camellia sinensis var. sinensis HOM05D009493 ORTHO05D010864 5.2e-99 365.9 564 47.3
Cfa020341 Carpinus fangiana HOM05D009493 ORTHO05D010864 1.8e-80 304.3 551 45.2
Haze_09678 Corylus avellana HOM05D009493 ORTHO05D010864 1.2e-79 301.6 575 44.0
Lj8C169G14 Lonicera japonica HOM05D009493 ORTHO05D010864 4.5e-79 299.7 552 44.7
CiPaw.11G189700 Carya illinoinensis HOM05D009493 ORTHO05D010864 7.5e-66 255.8 537 41.3
Atru.chr2.3411 Acer truncatum HOM05D009493 ORTHO05D010864 4.1e-64 250.0 549 42.3
Manes.03G129400 Manihot esculenta HOM05D009493 ORTHO05D010864 2.3e-62 244.2 570 37.9
Cpa.g.sc12.306 Carica papaya HOM05D009493 ORTHO05D010864 4.0e-59 233.4 552 38.6
TAR627G0367 Trochodendron aralioides HOM05D009493 ORTHO05D010864 1.1e-53 215.3 599 36.2
QL08p010122 Quercus lobata HOM05D009493 ORTHO05D010864 6.8e-51 206.1 546 36.8
RcHm_v2.0_Chr5g0039641 Rosa chinensis HOM05D009493 ORTHO05D010864 5.8e-50 203.0 604 34.1
FAN21G1215 Fragaria x ananassa HOM05D009493 ORTHO05D010864 2.3e-46 191.0 607 32.8
Nn1g07124 Nelumbo nucifera HOM05D009493 ORTHO05D010864 9.6e-45 185.7 588 34.2
FAN16G2842 Fragaria x ananassa HOM05D009493 ORTHO05D010864 3.6e-44 183.7 614 32.7
FAN11G1908 Fragaria x ananassa HOM05D009493 ORTHO05D010864 1.9e-40 171.4 630 31.3
Nn1g03528 Nelumbo nucifera HOM05D009493 ORTHO05D010864 7.8e-39 166.0 311 45.7
PSO832G2006 Papaver somniferum HOM05D001869 ORTHO05D010864 1.3e-38 165.2 302 43.7
FvH4_3g22720 Fragaria vesca HOM05D009493 ORTHO05D010864 3.0e-38 164.1 629 31.0
ECA246G2975 Erigeron canadensis HOM05D001869 ORTHO05D010864 5.6e-37 159.8 551 31.0
PSO210G3651 Papaver somniferum HOM05D001869 ORTHO05D010864 5.6e-37 159.8 303 41.6
Prupe.4G213700 Prunus persica HOM05D009493 ORTHO05D010864 5.6e-37 159.8 524 34.5
MD03G1200600 Malus domestica HOM05D001869 ORTHO05D010864 2.1e-31 141.4 296 42.6
Cc05_g13660 Coffea canephora HOM05D001869 ORTHO05D010864 3.5e-31 140.6 690 29.4
SEGI_30258 Sequoiadendron giganteum HOM05D001869 ORTHO05D010864 3.8e-25 120.6 177 48.0
Aqoxy1G02756 Aquilegia oxysepala HOM05D001869 ORTHO05D010864 6.4e-25 119.8 303 39.6
SEGI_08807 Sequoiadendron giganteum HOM05D001869 ORTHO05D010864 6.4e-25 119.8 188 46.3
MBI18_g14125_MAGBIO Magnolia biondii HOM05D009493 ORTHO05D010864 4.8e-20 103.6 565 30.1
FAN25G1786 Fragaria x ananassa HOM05D001869 ORTHO05D010864 3.1e-19 100.9 61 80.3
Os01g0367300 Oryza sativa ssp. japonica HOM05D001869 ORTHO05D010864 1.2e-18 99.0 61 75.4
Zm00001eb105900 Zea mays HOM05D001869 ORTHO05D010864 3.4e-18 97.4 61 72.1
Mapoly0019s0057 Marchantia polymorpha HOM05D001869 ORTHO05D010864 5.8e-18 96.7 63 76.2
AagrBONN_evm.TU.Sc2ySwM_117.2171 Anthoceros agrestis HOM05D001869 ORTHO05D010864 6.0e-15 86.7 132 50.0
MBI18_g14126_MAGBIO Magnolia biondii HOM05D009493 ORTHO05D010864 2.4e-11 74.7 43 76.7
HPP92_015979 Vanilla planifolia HOM05D001869 ORTHO05D010864 3.4e-10 70.9 580 27.6
CBR_g55300 Chara braunii HOM05D001869 ORTHO05D010864 7.6e-10 69.7 180 39.4
Ah.10g032270 Amaranthus hybridus HOM05D000142 ORTHO05D000124 1.8e-06 58.5 57 47.4
SEGI_41610 Sequoiadendron giganteum HOM05D000142 ORTHO05D000124 1.8e-06 58.5 57 49.1
Lsat_1_v5_gn_1_13420 Lactuca sativa HOM05D000142 ORTHO05D000124 3.0e-06 57.8 57 47.4
Lj5g0003620 Lotus japonicus HOM05D000142 ORTHO05D001253 3.0e-06 57.8 59 42.4
DCAR_007401 Daucus carota HOM05D001869 ORTHO05D002013 3.9e-06 57.4 60 43.3
EL10Ac2g03140 Beta vulgaris HOM05D000142 ORTHO05D000124 5.1e-06 57.0 58 48.3
ECA232G4464 Erigeron canadensis HOM05D000142 ORTHO05D000124 5.1e-06 57.0 57 45.6
SEGI_28070 Sequoiadendron giganteum HOM05D000142 ORTHO05D001253 5.1e-06 57.0 57 45.6
HPP92_022065 Vanilla planifolia HOM05D001869 ORTHO05D002013 5.1e-06 57.0 58 43.1
CBR_g61511 Chara braunii HOM05D001869 ORTHO05D002013 6.7e-06 56.6 58 43.1
Gorai.013G261000 Gossypium raimondii HOM05D001869 ORTHO05D002013 6.7e-06 56.6 60 43.3
Prupe.5G205300 Prunus persica HOM05D000142 ORTHO05D000124 6.7e-06 56.6 57 49.1
RcHm_v2.0_Chr7g0183111 Rosa chinensis HOM05D000142 ORTHO05D000124 6.7e-06 56.6 57 50.9
SMO364G0214 Selaginella moellendorffii HOM05D000142 ORTHO05D000124 6.7e-06 56.6 58 41.4
Aa31LG1G6660 Aethionema arabicum HOM05D001869 ORTHO05D002013 8.7e-06 56.2 54 48.1
AUR62038670 Chenopodium quinoa HOM05D000142 ORTHO05D000124 8.7e-06 56.2 57 49.1
Cre13.g602850 Chlamydomonas reinhardtii HOM05D001869 ORTHO05D000124 8.7e-06 56.2 61 41.0
Haze_08809 Corylus avellana HOM05D001869 ORTHO05D002013 8.7e-06 56.2 54 42.6
Dinv37620 Davidia involucrata HOM05D001869 ORTHO05D002013 8.7e-06 56.2 58 39.7
FvH4_5g13820 Fragaria vesca HOM05D000142 ORTHO05D000124 8.7e-06 56.2 57 50.9
FAN13G3109 Fragaria x ananassa HOM05D000142 ORTHO05D000124 8.7e-06 56.2 57 50.9
FAN18G1817 Fragaria x ananassa HOM05D000142 ORTHO05D000124 8.7e-06 56.2 57 50.9
Gohir.A13G225300 Gossypium hirsutum HOM05D001869 ORTHO05D002013 8.7e-06 56.2 60 43.3
Gohir.D13G230400 Gossypium hirsutum HOM05D001869 ORTHO05D002013 8.7e-06 56.2 60 43.3
MD06G1225200 Malus domestica HOM05D000142 ORTHO05D000124 8.7e-06 56.2 57 49.1
Sopen06g033060 Solanum pennellii HOM05D001869 ORTHO05D002013 8.7e-06 56.2 54 44.4
TPR.G2000 Trifolium pratense HOM05D000142 ORTHO05D000124 8.7e-06 56.2 57 49.1


User provided reference genes

Program Settings