Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 2.1e-263 911.8 449 100.0
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 7.7e-189 664.1 399 85.2
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 9.2e-174 614.0 399 75.4
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 3.5e-173 612.1 399 75.4
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.0e-168 596.3 411 72.0
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 9.8e-168 594.0 399 74.2
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 3.9e-164 582.0 399 73.2
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 2.8e-162 575.9 399 70.9
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 8.9e-161 570.9 399 69.9
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 2.9e-159 565.8 397 69.8
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 6.4e-159 564.7 399 69.7
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 1.4e-158 563.5 399 70.2
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 3.2e-158 562.4 399 70.2
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 3.0e-156 555.8 399 68.9
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 2.5e-155 552.7 399 68.4
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 7.3e-155 551.2 399 68.7
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 2.1e-154 549.7 399 67.4
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 1.8e-153 546.6 398 67.3
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 8.9e-153 544.3 415 66.3
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 3.4e-152 542.3 396 67.7
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 3.4e-152 542.3 399 66.7
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 4.4e-152 542.0 399 64.9
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 5.8e-152 541.6 407 72.7
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 2.2e-151 539.7 398 66.6
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 2.9e-151 539.3 399 66.2
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 1.4e-150 537.0 427 63.0
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 2.4e-150 536.2 398 65.8
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 5.4e-150 535.0 399 64.7
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 7.1e-150 534.6 399 66.7
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 9.2e-150 534.3 399 66.2
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 1.6e-149 533.5 399 66.7
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 2.7e-149 532.7 399 66.4
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 7.8e-149 531.2 397 65.7
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 3.0e-148 529.3 399 66.4
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 3.9e-148 528.9 399 64.7
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 5.1e-148 528.5 398 65.3
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 3.3e-147 525.8 399 64.2
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 4.3e-147 525.4 399 65.2
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 4.3e-147 525.4 399 62.9
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 5.6e-147 525.0 399 65.4
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 7.3e-147 524.6 399 64.4
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 7.3e-147 524.6 399 63.2
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 2.1e-146 523.1 399 63.7
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 9.0e-145 517.7 399 65.2
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 5.8e-144 515.0 397 65.0
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 1.3e-143 513.8 399 61.9
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.7e-143 513.5 397 65.5
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.7e-143 513.5 438 61.6
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 2.2e-143 513.1 397 64.0
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 3.8e-143 512.3 399 61.7
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 3.8e-143 512.3 399 62.2
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 6.4e-143 511.5 399 64.4
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 6.4e-143 511.5 404 62.6
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 1.1e-142 510.8 399 61.4
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.1e-142 510.8 400 62.5
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 2.4e-142 509.6 402 61.9
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 9.3e-142 507.7 399 61.2
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 9.3e-142 507.7 398 64.3
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 6.0e-141 505.0 398 62.1
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 7.8e-141 504.6 417 61.9
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 1.7e-140 503.4 426 61.5
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 5.1e-140 501.9 398 62.1
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 6.6e-140 501.5 433 59.1
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 8.7e-140 501.1 412 62.1
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 2.4e-137 493.0 399 61.9
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 7.6e-136 488.0 400 60.2
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 2.9e-135 486.1 400 62.0
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 2.4e-134 483.0 402 60.4
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 7.1e-134 481.5 400 60.8
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 1.6e-133 480.3 400 61.0
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 1.6e-133 480.3 400 61.2
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 1.1e-131 474.2 400 61.0
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 2.8e-130 469.5 401 60.8
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 4.8e-130 468.8 401 61.1
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 8.1e-130 468.0 401 60.1
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.8e-129 466.8 404 58.7
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 1.9e-126 456.8 432 56.2
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 4.2e-126 455.7 389 58.6
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 6.0e-125 451.8 399 57.4
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 7.4e-123 444.9 462 51.9
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 9.6e-123 444.5 406 60.3
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 2.8e-122 443.0 397 54.9
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 2.4e-121 439.9 396 54.5
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.2e-120 437.6 686 39.5
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 2.5e-118 429.9 325 65.2
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 7.1e-118 428.3 399 53.1
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 1.9e-115 420.2 300 66.7
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 2.8e-114 416.4 296 68.2
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 8.2e-114 414.8 299 66.9
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 3.1e-113 412.9 314 65.0
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 5.0e-103 379.0 408 47.5
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 1.4e-97 360.9 369 48.8
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 7.0e-97 358.6 378 45.2
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 8.5e-95 351.7 419 45.8
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 2.3e-92 343.6 284 60.6
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 6.7e-92 342.0 377 52.0
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 8.8e-92 341.7 220 74.1
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 1.7e-90 337.4 283 60.1
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 7.0e-89 332.0 284 58.8
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.7e-87 327.4 393 45.0
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 3.8e-79 299.7 285 54.0
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 1.8e-76 290.8 284 53.2
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 7.7e-72 275.4 360 46.4
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 1.9e-62 244.2 174 64.9
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 5.6e-62 242.7 403 38.7
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.1e-54 218.4 208 54.3
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 3.6e-53 213.4 183 59.0
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.3e-50 204.9 136 72.8
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 1.3e-50 204.9 231 46.3
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 1.5e-46 191.4 115 82.6
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 2.8e-45 187.2 184 53.8
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 2.6e-43 180.6 211 48.8
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 7.8e-40 169.1 184 48.9
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 4.0e-36 156.8 199 42.2
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 9.6e-30 135.6 80 77.5
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 1.9e-25 121.3 104 51.0
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 6.0e-24 116.3 74 75.7
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 7.3e-22 109.4 122 47.5
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 4.0e-20 103.6 122 45.9
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 2.6e-19 100.9 395 24.3
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 2.9e-18 97.4 437 23.1
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 4.6e-16 90.1 411 22.6
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 1.3e-15 88.6 120 44.2
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 9.6e-14 82.4 55 67.3
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 3.1e-12 77.4 47 78.7
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 1.0e-07 62.4 34 88.2


User provided reference genes

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