Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 2.5e-281 971.5 486 100.0
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.4e-188 662.5 477 70.9
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 5.4e-188 661.4 477 71.1
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 5.4e-188 661.4 399 85.2
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 3.1e-175 619.0 468 67.7
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.0e-175 618.6 475 66.5
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 3.5e-171 605.5 454 68.3
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 3.8e-165 585.5 461 65.3
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 1.6e-163 580.1 461 64.4
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 1.6e-163 580.1 458 64.8
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 1.5e-161 573.5 470 63.4
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 5.9e-158 561.6 461 63.8
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.0e-157 560.8 433 65.6
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 1.3e-157 560.5 460 62.6
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 3.0e-154 549.3 472 60.8
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 2.8e-152 542.7 428 65.7
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 3.7e-152 542.3 461 62.5
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 4.8e-152 542.0 444 62.8
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.8e-151 540.0 462 59.1
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 5.3e-151 538.5 453 62.3
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 2.6e-150 536.2 440 62.3
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 4.5e-150 535.4 456 59.9
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 4.5e-150 535.4 461 60.3
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 1.0e-149 534.3 435 62.8
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 1.3e-149 533.9 464 58.8
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 2.2e-149 533.1 440 61.8
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 8.5e-149 531.2 465 58.5
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 1.4e-148 530.4 461 60.1
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 2.5e-148 529.6 440 62.0
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 1.2e-147 527.3 463 60.5
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 2.7e-147 526.2 460 58.7
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 9.7e-145 517.7 466 59.2
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 2.2e-144 516.5 445 59.1
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 4.8e-144 515.4 441 61.0
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 6.3e-144 515.0 468 58.5
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 1.1e-143 514.2 442 60.0
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 1.8e-143 513.5 454 59.3
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 2.4e-143 513.1 469 58.2
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 9.1e-143 511.1 461 57.3
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 2.2e-141 506.5 444 58.1
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 5.0e-141 505.4 433 58.4
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 2.5e-140 503.1 458 57.0
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 3.2e-140 502.7 465 56.8
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 6.1e-139 498.4 464 56.0
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 7.9e-139 498.0 438 58.7
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.4e-138 497.3 472 57.0
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 5.2e-138 495.4 435 57.7
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 5.2e-138 495.4 436 58.7
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 3.3e-137 492.7 443 55.8
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 3.3e-137 492.7 457 56.5
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 5.7e-137 491.9 446 58.1
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 7.4e-137 491.5 464 56.7
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 9.7e-137 491.1 443 55.5
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 2.8e-136 489.6 410 60.5
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 1.4e-135 487.3 430 56.5
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.8e-135 486.9 449 58.6
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 2.0e-134 483.4 430 57.0
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 7.7e-134 481.5 457 56.5
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.0e-133 481.1 462 55.0
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 1.3e-133 480.7 475 56.4
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.7e-133 480.3 401 60.8
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.8e-133 479.2 464 57.1
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 5.5e-132 475.3 430 57.0
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 9.4e-132 474.6 430 56.7
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 1.8e-130 470.3 440 55.2
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 4.0e-130 469.2 377 69.8
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 5.2e-130 468.8 441 56.0
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 2.0e-129 466.8 436 56.0
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 3.3e-129 466.1 418 58.4
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 7.5e-129 464.9 442 56.6
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 9.7e-129 464.5 452 56.2
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 2.8e-128 463.0 437 56.5
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 2.7e-126 456.4 463 54.9
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 6.5e-125 451.8 464 54.7
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 1.5e-124 450.7 464 55.0
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.2e-124 449.5 453 56.3
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 1.2e-123 447.6 459 53.8
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 3.0e-122 443.0 490 51.2
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 9.8e-121 438.0 327 64.8
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 1.7e-120 437.2 327 66.7
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 9.1e-119 431.4 437 52.9
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 3.2e-116 422.9 310 66.8
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.1e-115 420.2 444 50.9
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.4e-114 417.5 444 50.5
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 1.8e-114 417.2 307 66.8
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 4.0e-114 416.0 494 47.2
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.3e-112 411.0 354 59.9
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 3.7e-112 409.5 747 37.2
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 6.3e-112 408.7 438 47.9
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 1.8e-111 407.1 443 49.2
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 6.2e-99 365.5 404 50.5
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 9.8e-97 358.2 243 71.2
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.7e-96 357.5 433 43.9
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.9e-96 355.9 359 56.0
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 1.1e-87 328.2 360 46.9
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 3.3e-84 316.6 313 54.3
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 1.5e-81 307.8 315 53.3
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 6.6e-77 292.4 293 46.1
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 4.3e-76 289.7 320 49.7
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.5e-73 281.2 326 45.4
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 9.9e-73 278.5 314 48.7
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 6.4e-72 275.8 308 50.6
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 1.0e-69 268.5 319 47.3
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 1.6e-62 244.6 174 65.5
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.3e-56 224.9 416 37.3
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 6.0e-54 216.1 147 76.2
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.8e-51 206.5 136 72.8
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 2.9e-48 197.2 215 52.6
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.9e-47 194.5 238 47.1
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 3.1e-42 177.2 212 44.8
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 1.0e-40 172.2 219 45.7
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 1.5e-33 148.3 98 71.4
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.0e-32 145.6 214 43.0
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 1.5e-25 121.7 105 51.4
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 1.3e-24 118.6 231 33.8
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.2e-24 117.9 175 40.0
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 1.0e-21 109.0 96 57.3
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 8.2e-19 99.4 96 52.1
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 4.1e-18 97.1 134 44.0
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 2.6e-17 94.4 96 51.0
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 1.1e-15 89.0 108 48.1
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 3.6e-14 84.0 394 23.1
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 2.0e-09 68.2 246 23.6
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 8.5e-08 62.8 40 75.0


User provided reference genes

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