Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 5.2e-157 557.8 298 100.0
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 2.4e-101 372.9 300 66.7
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 9.9e-100 367.5 300 66.3
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.8e-99 365.5 297 68.0
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 1.2e-92 344.0 298 64.8
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 1.5e-92 343.6 296 64.9
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 1.2e-89 334.0 297 62.3
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 2.1e-89 333.2 298 63.1
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 7.9e-89 331.3 299 61.5
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 1.4e-85 320.5 298 57.0
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 6.5e-83 311.6 383 49.6
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 5.5e-82 308.5 303 58.4
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 7.9e-81 304.7 305 60.0
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.0e-80 304.3 243 74.5
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 1.0e-80 304.3 297 55.2
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 1.1e-79 300.8 296 55.4
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 2.5e-79 299.7 296 55.1
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 4.3e-79 298.9 294 56.5
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 9.7e-79 297.7 301 55.8
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 1.3e-78 297.4 304 57.2
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 2.8e-78 296.2 223 70.4
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 1.4e-77 293.9 302 56.3
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 1.2e-76 290.8 295 56.3
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 2.0e-76 290.0 298 60.7
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 7.7e-76 288.1 297 56.6
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.0e-75 287.7 307 55.7
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 8.5e-75 284.6 308 59.1
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 1.1e-74 284.3 303 55.4
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 2.5e-74 283.1 298 55.7
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 2.5e-74 283.1 303 55.4
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 9.4e-74 281.2 297 53.2
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 9.4e-74 281.2 266 61.3
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 6.1e-73 278.5 299 57.5
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 6.1e-73 278.5 299 55.5
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 1.8e-72 276.9 358 49.7
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 2.3e-72 276.6 301 50.5
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 5.1e-72 275.4 300 55.7
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 6.7e-72 275.0 298 53.4
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 9.7e-71 271.2 316 56.0
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 1.7e-70 270.4 303 56.1
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 1.5e-68 263.8 300 53.3
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 1.3e-67 260.8 345 46.7
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 5.0e-67 258.8 251 57.4
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 7.2e-66 255.0 299 53.2
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 1.2e-65 254.2 283 56.2
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 1.2e-65 254.2 306 51.0
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 1.6e-65 253.8 303 54.5
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 1.6e-65 253.8 251 56.6
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 3.6e-65 252.7 252 57.5
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 6.1e-65 251.9 299 50.2
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 3.9e-64 249.2 315 49.8
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 3.9e-64 249.2 305 50.5
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 5.2e-64 248.8 241 58.5
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 5.2e-64 248.8 303 51.2
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 8.8e-64 248.1 306 52.3
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 8.8e-64 248.1 298 49.3
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 1.1e-63 247.7 316 51.3
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.5e-63 247.3 294 52.7
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 4.4e-63 245.7 246 56.9
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 9.7e-63 244.6 313 51.1
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 9.7e-63 244.6 298 51.0
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 3.7e-62 242.7 251 53.8
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 3.7e-62 242.7 240 58.8
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 4.1e-61 239.2 306 50.0
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 5.3e-61 238.8 306 48.4
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 1.6e-60 237.3 306 48.0
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 5.9e-60 235.3 273 53.5
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 1.7e-59 233.8 207 62.3
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 1.7e-59 233.8 272 54.0
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 1.1e-58 231.1 308 47.7
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 1.5e-58 230.7 271 51.3
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 1.9e-58 230.3 236 55.9
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 4.2e-58 229.2 377 42.4
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 9.4e-58 228.0 288 54.5
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 1.2e-57 227.6 306 46.7
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 2.1e-57 226.9 304 46.7
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 3.6e-57 226.1 260 53.1
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 8.0e-57 224.9 281 52.0
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 1.4e-56 224.2 212 59.4
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 3.0e-56 223.0 290 50.0
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 4.0e-56 222.6 301 48.2
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 4.0e-56 222.6 299 46.2
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 5.2e-56 222.2 224 57.1
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 2.6e-55 219.9 209 57.4
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 2.6e-55 219.9 304 48.0
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 1.7e-54 217.2 198 61.1
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 2.2e-54 216.9 289 52.2
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 4.8e-54 215.7 311 47.9
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 8.2e-54 214.9 193 61.7
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 3.1e-53 213.0 311 44.4
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 5.3e-53 212.2 331 42.9
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 7.7e-52 208.4 308 44.2
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 1.3e-51 207.6 308 44.2
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.9e-50 203.8 297 48.1
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 5.5e-50 202.2 308 44.8
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 9.4e-50 201.4 192 58.9
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.3e-48 196.8 210 55.7
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 4.5e-44 182.6 176 61.9
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 2.9e-43 179.9 310 40.3
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.3e-32 143.7 135 61.5
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.0e-32 143.3 150 55.3
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 2.4e-29 133.7 258 37.2
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 4.6e-28 129.4 221 45.2
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 1.2e-25 121.3 205 38.5
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 2.9e-22 110.2 222 39.2
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 4.1e-21 106.3 126 49.2
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.0e-19 100.1 122 47.5
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 6.2e-17 92.4 156 41.0
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.8e-16 90.9 154 39.6
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 3.1e-16 90.1 61 73.8
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 5.8e-15 85.9 76 59.2
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 9.8e-15 85.1 92 52.2
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 1.4e-13 81.3 87 48.3
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 7.8e-12 75.5 79 44.3
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 1.3e-11 74.7 88 43.2
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 1.5e-10 71.2 103 39.8
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.8e-08 64.3 42 71.4
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.1e-08 63.5 45 64.4


User provided reference genes

Program Settings