Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 3.3e-150 535.0 276 100.0
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 8.3e-109 397.5 283 75.6
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 7.0e-108 394.4 256 79.7
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 1.6e-107 393.3 271 77.5
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 1.5e-102 376.7 270 73.0
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 1.7e-101 373.2 277 72.2
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 6.4e-101 371.3 273 74.0
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 8.3e-101 370.9 222 84.7
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 1.9e-100 369.8 273 71.1
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 1.9e-100 369.8 272 71.0
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 3.2e-100 369.0 265 74.7
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 1.2e-99 367.1 274 73.0
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 1.2e-99 367.1 273 72.5
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 3.5e-99 365.5 272 70.2
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 4.6e-99 365.2 237 78.9
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 6.0e-99 364.8 272 70.2
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 1.0e-98 364.0 259 73.7
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 1.0e-98 364.0 273 72.5
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 2.3e-98 362.8 276 69.6
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 8.6e-98 360.9 197 89.3
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 1.5e-97 360.1 273 70.3
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 1.9e-97 359.8 265 72.5
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 1.9e-97 359.8 236 78.8
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 2.5e-97 359.4 275 69.5
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 4.3e-97 358.6 259 72.2
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 7.3e-97 357.8 274 70.1
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 3.6e-96 355.5 270 70.0
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 4.7e-96 355.1 257 72.0
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 8.1e-96 354.4 232 77.2
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 8.1e-96 354.4 234 78.6
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 1.1e-95 354.0 261 70.5
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 8.9e-95 350.9 266 71.8
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 1.5e-94 350.1 253 71.9
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 2.0e-94 349.7 272 70.6
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 1.3e-93 347.1 271 67.2
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 2.2e-93 346.3 271 71.6
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 2.9e-93 345.9 274 70.4
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 2.9e-93 345.9 239 74.5
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 2.9e-93 345.9 242 73.1
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 4.9e-93 345.1 244 72.5
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 6.4e-93 344.7 271 71.6
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 8.3e-93 344.4 234 76.5
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.1e-92 344.0 271 70.5
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 1.4e-92 343.6 225 76.9
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 1.4e-92 343.6 235 74.5
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 2.4e-92 342.8 239 72.4
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 2.4e-92 342.8 225 76.0
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 2.4e-92 342.8 218 80.3
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 3.2e-92 342.4 226 75.2
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 5.4e-92 341.7 235 73.2
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 5.4e-92 341.7 247 70.9
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 1.2e-91 340.5 238 72.7
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 1.6e-91 340.1 236 73.3
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 2.1e-91 339.7 199 84.4
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 2.7e-91 339.3 279 64.9
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 3.5e-91 339.0 226 74.8
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 3.5e-91 339.0 226 74.8
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 3.5e-91 339.0 217 77.0
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 4.6e-91 338.6 275 68.4
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 7.8e-91 337.8 256 69.9
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 1.0e-90 337.4 235 71.9
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 1.0e-90 337.4 235 71.9
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 1.0e-90 337.4 235 71.9
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 1.0e-90 337.4 225 75.6
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 1.0e-90 337.4 258 69.0
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 1.0e-90 337.4 237 70.5
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 3.0e-90 335.9 236 73.3
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 3.9e-90 335.5 229 74.7
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 3.9e-90 335.5 219 75.3
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 3.9e-90 335.5 220 74.5
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 3.9e-90 335.5 251 69.7
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 1.1e-89 334.0 267 67.4
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 1.1e-89 334.0 235 71.5
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 1.9e-89 333.2 276 65.2
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 2.5e-89 332.8 236 72.5
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 2.5e-89 332.8 219 74.4
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 3.3e-89 332.4 258 68.2
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 4.3e-89 332.0 198 79.8
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 5.6e-89 331.6 241 70.5
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 7.3e-89 331.3 204 78.9
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 2.1e-88 329.7 235 70.6
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 3.6e-88 328.9 225 73.3
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 1.2e-86 323.9 273 64.5
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 2.9e-85 319.3 213 74.2
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 1.6e-83 313.5 182 85.2
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 2.7e-83 312.8 208 78.8
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 4.6e-83 312.0 212 73.1
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 1.3e-82 310.5 228 67.5
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 2.1e-80 303.1 273 61.5
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.8e-79 300.1 238 66.4
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 3.1e-79 299.3 174 85.6
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 6.9e-79 298.1 178 79.8
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 2.9e-77 292.7 260 65.0
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 3.3e-73 279.3 179 73.2
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 3.3e-73 279.3 197 67.5
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 8.4e-69 264.6 274 56.6
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 2.1e-67 260.0 211 60.7
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.5e-65 253.8 199 61.3
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 3.7e-64 249.2 206 58.7
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 1.3e-61 240.7 250 57.6
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 4.9e-61 238.8 142 78.2
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 1.9e-60 236.9 142 80.3
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 2.4e-60 236.5 165 74.5
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.3e-58 230.7 203 57.1
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 5.1e-58 228.8 142 76.1
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 7.1e-52 208.4 279 48.4
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 1.3e-50 204.1 207 50.7
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 3.8e-45 186.0 197 49.7
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 6.3e-40 168.7 212 45.3
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 9.1e-39 164.9 107 72.0
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 7.2e-36 155.2 270 43.0
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 8.0e-27 125.2 77 77.9
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 1.8e-26 124.0 75 78.7
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 2.9e-21 106.7 74 68.9
Ca_02074_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 4.2e-20 102.8 100 61.0
CARHR293210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 3.0e-18 96.7 64 76.6
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 8.8e-18 95.1 153 39.9
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 1.8e-15 87.4 55 72.7
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 7.7e-14 82.0 154 31.8
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 2.7e-11 73.6 147 34.0
Sabra02G0024500 Salix brachista HOM05D001587 ORTHO05D037360 8.3e-08 62.0 38 76.3


User provided reference genes

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