Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38972 Davidia involucrata HOM05D005566 ORTHO05D007534 0.0e+00 1303.5 684 100.0
CSS0044378 Camellia sinensis var. sinensis HOM05D005566 ORTHO05D007534 3.6e-254 881.7 687 70.3
Hma1.2p1_1943F.1_g308460 Hydrangea macrophylla HOM05D005566 ORTHO05D007534 1.4e-218 763.5 600 68.5
Actinidia02022 Actinidia chinensis HOM05D005566 ORTHO05D007534 1.1e-215 753.8 730 59.5
GSVIVG01019806001 Vitis vinifera HOM05D005566 ORTHO05D007534 3.2e-202 709.1 683 59.4
Cc08_g14350 Coffea canephora HOM05D005566 ORTHO05D007534 7.1e-194 681.4 678 58.3
TAR629G1018 Trochodendron aralioides HOM05D005566 ORTHO05D007534 7.9e-193 677.9 710 55.2
QL12p018066 Quercus lobata HOM05D005566 ORTHO05D007534 3.3e-191 672.5 675 57.2
Sabra03G0087800 Salix brachista HOM05D005566 ORTHO05D007534 3.4e-188 662.5 684 56.3
Potri.003G124200 Populus trichocarpa HOM05D005566 ORTHO05D007534 1.3e-187 660.6 688 56.2
Haze_08893 Corylus avellana HOM05D005566 ORTHO05D007534 2.2e-187 659.8 653 57.9
Nn6g33532 Nelumbo nucifera HOM05D005566 ORTHO05D007534 2.9e-187 659.4 654 58.1
Manes.02G024200 Manihot esculenta HOM05D005566 ORTHO05D007534 6.5e-187 658.3 689 55.7
Oeu049553.1 Olea europaea HOM05D005566 ORTHO05D007534 3.2e-186 656.0 682 57.0
Cfa012142 Carpinus fangiana HOM05D005566 ORTHO05D007534 9.3e-186 654.4 653 57.9
MSTRG.11999 Avicennia marina HOM05D005566 ORTHO05D007534 1.0e-184 651.0 685 56.2
Peaxi162Scf00102g01550 Petunia axillaris HOM05D005566 ORTHO05D007534 2.3e-184 649.8 776 51.4
Solyc08g007950.3 Solanum lycopersicum HOM05D005566 ORTHO05D007534 6.7e-184 648.3 667 56.2
Thecc.03G275300 Theobroma cacao HOM05D005566 ORTHO05D007534 2.5e-183 646.4 683 55.1
Sopen08g003840 Solanum pennellii HOM05D005566 ORTHO05D007534 6.5e-179 631.7 725 52.1
CAN.G792.89 Capsicum annuum HOM05D005566 ORTHO05D007534 4.2e-178 629.0 654 55.2
Ciclev10024399m.g Citrus clementina HOM05D005566 ORTHO05D007534 1.6e-177 627.1 674 52.5
Duzib084G0536 Durio zibethinus HOM05D005566 ORTHO05D007534 1.5e-175 620.5 682 52.9
Prupe.5G095700 Prunus persica HOM05D005566 ORTHO05D007534 8.2e-174 614.8 695 52.5
Gohir.A12G226600 Gossypium hirsutum HOM05D005566 ORTHO05D007534 5.3e-173 612.1 681 52.4
PGR031G0987 Punica granatum HOM05D005566 ORTHO05D007534 5.3e-173 612.1 689 52.5
SalBow6G1897 Salvia bowleyana HOM05D005566 ORTHO05D007534 1.3e-171 607.4 721 51.0
Lj2A187T86 Lonicera japonica HOM05D005566 ORTHO05D007534 2.2e-171 606.7 617 57.2
Gohir.D12G229000 Gossypium hirsutum HOM05D005566 ORTHO05D007534 2.9e-171 606.3 681 51.8
Nitab4.5_0001200g0190 Nicotiana tabacum HOM05D005566 ORTHO05D007534 2.9e-171 606.3 681 52.6
Atru.chr9.204 Acer truncatum HOM05D005566 ORTHO05D007534 5.0e-171 605.5 628 54.8
Eucgr.D01874 Eucalyptus grandis HOM05D005566 ORTHO05D007534 1.4e-170 604.0 674 52.4
Gorai.008G245200 Gossypium raimondii HOM05D005566 ORTHO05D007534 7.2e-170 601.7 682 51.3
TWI81G0928 Tripterygium wilfordii HOM05D005566 ORTHO05D007534 2.1e-169 600.1 682 50.9
SalBow5G3774 Salvia bowleyana HOM05D005566 ORTHO05D007534 3.6e-169 599.4 743 48.7
Sed0016580 Sechium edule HOM05D005566 ORTHO05D007534 1.8e-168 597.0 674 53.7
CANSAT21G2631 Cannabis sativa HOM05D005566 ORTHO05D007534 6.7e-168 595.1 688 51.9
CiPaw.12G095300 Carya illinoinensis HOM05D005566 ORTHO05D007534 5.7e-167 592.0 597 56.3
ClCG01G002940 Citrullus lanatus HOM05D005566 ORTHO05D007534 2.2e-166 590.1 655 53.1
CsaV3_5G003020 Cucumis sativus L. HOM05D005566 ORTHO05D007534 2.8e-166 589.7 652 53.5
Rhsim02G0223600 Rhododendron simsii HOM05D005566 ORTHO05D007534 6.3e-166 588.6 877 43.4
COL.COLO4_34426 Corchorus olitorius HOM05D005566 ORTHO05D007534 1.8e-165 587.0 694 51.6
MD06G1077900 Malus domestica HOM05D005566 ORTHO05D007534 3.8e-163 579.3 701 50.9
Lalb_Chr09g0333291 Lupinus albus HOM05D005566 ORTHO05D007534 1.5e-162 577.4 649 51.3
Duzib205G0430 Durio zibethinus HOM05D005566 ORTHO05D007534 2.1e-161 573.5 681 51.4
Nitab4.5_0004032g0020 Nicotiana tabacum HOM05D005566 ORTHO05D007534 8.0e-161 571.6 689 50.8
FvH4_5g01950 Fragaria vesca HOM05D005566 ORTHO05D007534 1.4e-160 570.9 734 49.9
FAN18G1004 Fragaria x ananassa HOM05D005566 ORTHO05D007534 3.0e-160 569.7 734 49.9
Actinidia14546 Actinidia chinensis HOM05D005566 ORTHO05D007534 4.0e-160 569.3 657 53.7
VMungo0251G1600 Vigna mungo HOM05D005566 ORTHO05D007534 4.0e-160 569.3 661 51.0
RcHm_v2.0_Chr7g0198431 Rosa chinensis HOM05D005566 ORTHO05D007534 6.7e-160 568.5 739 49.7
THA.LOC104809401 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 9.7e-159 564.7 689 50.8
Glyma.08G012600 Glycine max HOM05D005566 ORTHO05D007534 2.4e-157 560.1 663 51.0
FAN04G1912 Fragaria x ananassa HOM05D005566 ORTHO05D007534 7.0e-157 558.5 734 48.8
Migut.A00792 Erythranthe guttata HOM05D005566 ORTHO05D007534 9.1e-157 558.1 713 49.1
Ah.12g057290 Amaranthus hybridus HOM05D005566 ORTHO05D007534 7.7e-156 555.1 674 49.9
MELO3C005651.2 Cucumis melo HOM05D005566 ORTHO05D007534 7.7e-156 555.1 649 51.3
Thhalv10006889m.g Eutrema salsugineum HOM05D005566 ORTHO05D007534 1.3e-155 554.3 690 49.4
Sc22g0000210 Simmondsia chinensis HOM05D005566 ORTHO05D007534 2.2e-155 553.5 683 48.0
Lj4g0021136 Lotus japonicus HOM05D005566 ORTHO05D007534 3.8e-155 552.7 664 49.4
FAN13G1151 Fragaria x ananassa HOM05D005566 ORTHO05D007534 8.5e-155 551.6 736 48.6
CARHR013110 Cardamine hirsuta HOM05D005566 ORTHO05D007534 1.2e-153 547.7 689 49.6
vmacro11305 Vaccinium macrocarpon HOM05D005566 ORTHO05D007534 1.6e-153 547.4 717 47.8
Sp1g11360 Schrenkiella parvula HOM05D005566 ORTHO05D007534 1.4e-152 544.3 688 49.0
Aa31LG1G1950 Aethionema arabicum HOM05D005566 ORTHO05D007534 1.7e-150 537.3 689 49.2
AL1G24430 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 3.1e-149 533.1 700 48.9
AT1G12800 Arabidopsis thaliana HOM05D005566 ORTHO05D007534 3.1e-149 533.1 694 48.8
BcaC05g25155 Brassica carinata HOM05D005566 ORTHO05D007534 2.7e-148 530.0 693 48.5
Lsat_1_v5_gn_6_5820 Lactuca sativa HOM05D005566 ORTHO05D007534 3.5e-148 529.6 736 45.7
Phvul.002G287600 Phaseolus vulgaris HOM05D005566 ORTHO05D007534 3.5e-148 529.6 627 49.4
SGA_v2.0_scaffold253G45116 Striga asiatica HOM05D005566 ORTHO05D007534 5.9e-148 528.9 771 46.8
A06p08880 Brassica napus HOM05D005566 ORTHO05D007534 7.7e-148 528.5 686 48.3
Carub.0001s1252 Capsella rubella HOM05D005566 ORTHO05D007534 1.7e-147 527.3 691 48.2
PSO063G1293 Papaver somniferum HOM05D005566 ORTHO05D007534 2.9e-147 526.6 663 48.4
AUR62010607 Chenopodium quinoa HOM05D005566 ORTHO05D007534 1.1e-146 524.6 706 47.2
AUR62017248 Chenopodium quinoa HOM05D005566 ORTHO05D007534 1.2e-145 521.2 727 45.7
BcaC05g25112 Brassica carinata HOM05D005566 ORTHO05D007534 2.6e-143 513.5 702 48.1
EL10Ac5g12770 Beta vulgaris HOM05D005566 ORTHO05D007534 1.7e-142 510.8 712 46.1
FAN08G2943 Fragaria x ananassa HOM05D005566 ORTHO05D007534 5.4e-141 505.8 734 46.3
PSO782G1537 Papaver somniferum HOM05D005566 ORTHO05D007534 7.7e-140 501.9 673 46.7
HanXRQChr02g0048911 Helianthus annuus HOM05D005566 ORTHO05D007534 2.3e-139 500.4 714 45.0
C05p10500 Brassica napus HOM05D005566 ORTHO05D007534 2.9e-139 500.0 658 47.1
BolC5t29796H Brassica oleracea HOM05D005566 ORTHO05D007534 2.9e-139 500.0 658 47.1
MBI17_g08175_MAGBIO Magnolia biondii HOM05D005566 ORTHO05D004184 1.9e-138 497.3 614 50.3
BraA06t24082Z Brassica rapa HOM05D005566 ORTHO05D007534 4.3e-138 496.1 698 46.8
Ca_17550_v3 Cicer arietinum L. HOM05D005566 ORTHO05D007534 2.8e-137 493.4 678 46.3
ECA233G6007 Erigeron canadensis HOM05D005566 ORTHO05D007534 6.8e-136 488.8 762 42.9
DCAR_008409 Daucus carota HOM05D005566 ORTHO05D007534 8.9e-136 488.4 670 45.8
CSS0022681 Camellia sinensis var. sinensis HOM05D005566 ORTHO05D007534 2.9e-134 483.4 325 76.6
CDE05G3632 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 6.4e-134 482.3 665 46.2
Aqoxy5G04022 Aquilegia oxysepala HOM05D005566 ORTHO05D007534 1.1e-133 481.5 701 44.8
unitig_744.g24358 Utricularia gibba HOM05D005566 ORTHO05D007534 4.6e-132 476.1 661 47.0
arahy.Tifrunner.gnm1.ann1.H32RIC Arachis hypogaea HOM05D005566 ORTHO05D007534 5.0e-131 472.6 678 44.8
DCAR_004649 Daucus carota HOM05D005566 ORTHO05D007534 6.6e-131 472.2 657 45.5
arahy.Tifrunner.gnm1.ann1.8RU08H Arachis hypogaea HOM05D005566 ORTHO05D007534 1.6e-129 467.6 678 44.7
Cpa.g.sc76.21 Carica papaya HOM05D005566 ORTHO05D007534 6.8e-128 462.2 604 48.7
CDE08G0014 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 2.6e-127 460.3 668 44.5
Medtr8g097290 Medicago truncatula HOM05D005566 ORTHO05D007534 8.3e-126 455.3 760 39.9
Actinidia27393 Actinidia chinensis HOM05D005566 ORTHO05D007534 1.4e-120 438.0 347 65.4
Glyma.05G205700 Glycine max HOM05D005566 ORTHO05D007534 5.2e-120 436.0 584 46.6
TPR.G12738 Trifolium pratense HOM05D005566 ORTHO05D007534 2.2e-118 430.6 741 40.6
ATR0680G084 Amborella trichopoda HOM05D005566 ORTHO05D007534 8.3e-118 428.7 671 42.6
Psat7g035520 Pisum sativum HOM05D005566 ORTHO05D007534 1.2e-111 408.3 883 35.3
Lsat_1_v5_gn_3_7621 Lactuca sativa HOM05D005566 ORTHO05D007534 2.7e-108 397.1 678 41.6
Hund11490 Selenicereus undatus HOM05D005566 ORTHO05D007534 3.0e-107 393.7 678 40.4
HanXRQChr06g0165791 Helianthus annuus HOM05D005566 ORTHO05D007534 9.9e-103 378.6 672 39.9
ECA246G0114 Erigeron canadensis HOM05D005566 ORTHO05D007534 9.3e-101 372.1 630 38.4
THA.LOC104809657 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 1.7e-99 367.9 319 63.0
HPP92_014800 Vanilla planifolia HOM05D005566 ORTHO05D007534 1.2e-92 345.1 671 37.1
Os02g0115600 Oryza sativa ssp. japonica HOM05D005566 ORTHO05D007534 1.6e-89 334.7 651 36.6
Zm00001eb229900 Zea mays HOM05D005566 ORTHO05D007534 1.3e-86 325.1 670 36.7
AL1G24290 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 3.9e-75 287.0 292 56.5
MD14G1098700 Malus domestica HOM05D005566 ORTHO05D007534 1.2e-55 222.2 415 41.0
MD14G1098600 Malus domestica HOM05D005566 ORTHO05D007534 3.2e-53 214.2 162 67.9
arahy.Tifrunner.gnm1.ann1.SR6UK4 Arachis hypogaea HOM05D005566 ORTHO05D007534 2.0e-39 168.3 302 38.7
Mapoly0023s0130 Marchantia polymorpha HOM05D005566 ORTHO05D007534 5.9e-39 166.8 820 27.4
Pp3c15_23440 Physcomitrium patens HOM05D005566 ORTHO05D007534 2.7e-36 157.9 250 41.2
C08p15640 Brassica napus HOM05D005566 ORTHO05D007534 2.6e-34 151.4 167 53.9
BolC8t49191H Brassica oleracea HOM05D005566 ORTHO05D007534 2.6e-34 151.4 167 53.9
AagrBONN_evm.TU.Sc2ySwM_117.842 Anthoceros agrestis HOM05D005566 ORTHO05D007534 1.3e-33 149.1 251 35.9
Glyma.06G293800 Glycine max HOM05D005566 ORTHO05D007534 1.3e-33 149.1 156 49.4
Pp3c9_24810 Physcomitrium patens HOM05D005566 ORTHO05D007534 1.1e-29 136.0 609 27.6
Cpa.g.sc76.19 Carica papaya HOM05D005566 ORTHO05D007534 7.2e-29 133.3 78 85.9
SEGI_27473 Sequoiadendron giganteum HOM05D005566 ORTHO05D007534 2.2e-25 121.7 171 42.1
ECA233G5767 Erigeron canadensis HOM05D005566 ORTHO05D007534 1.5e-21 109.0 157 44.6
HPP92_014799 Vanilla planifolia HOM05D005566 ORTHO05D007534 1.9e-21 108.6 388 29.9
AagrBONN_evm.TU.Sc2ySwM_344.1810 Anthoceros agrestis HOM05D006611 ORTHO05D008093 3.1e-11 74.7 246 27.2
Pp3c14_26600 Physcomitrium patens HOM05D006611 ORTHO05D008093 1.5e-10 72.4 258 24.8
C05p39560 Brassica napus HOM05D005566 ORTHO05D031888 2.0e-10 72.0 230 29.6
SMO137G0002 Selaginella moellendorffii HOM05D006611 ORTHO05D008093 1.1e-08 66.2 246 25.2
BcaC05g27952 Brassica carinata HOM05D005566 ORTHO05D031888 1.4e-08 65.9 226 28.8
Pp3c17_14740 Physcomitrium patens HOM05D006611 ORTHO05D008093 1.2e-07 62.8 137 32.1
SEGI_37726 Sequoiadendron giganteum HOM05D005566 ORTHO05D007534 1.2e-07 62.8 52 51.9
Zm00001eb007100 Zea mays HOM05D005566 ORTHO05D051655 1.6e-07 62.4 47 63.8
Glyma.18G004100 Glycine max HOM05D006611 ORTHO05D008093 6.0e-07 60.5 121 35.5
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 1.0e-06 59.7 123 32.5
Glyma.11G252900 Glycine max HOM05D006611 ORTHO05D008093 1.3e-06 59.3 121 34.7
AUR62041563 Chenopodium quinoa HOM05D003161 ORTHO05D005173 3.9e-06 57.8 115 34.8
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 6.6e-06 57.0 137 34.3


User provided reference genes

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