Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 3.3e-95 351.7 174 100.0
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.9e-82 309.3 171 88.3
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 1.3e-78 296.6 169 85.2
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 6.2e-78 294.3 171 82.5
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 6.2e-78 294.3 169 83.4
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 1.1e-77 293.5 169 84.6
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 6.9e-77 290.8 167 85.0
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 4.5e-76 288.1 168 83.3
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 5.8e-76 287.7 170 80.6
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 3.8e-75 285.0 170 80.0
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 3.8e-75 285.0 170 80.0
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 2.5e-74 282.3 170 78.8
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 3.2e-74 282.0 171 77.8
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 1.6e-73 279.6 171 78.4
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 1.8e-72 276.2 165 82.4
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 8.7e-72 273.9 172 78.5
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 1.9e-71 272.7 164 79.9
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 2.5e-71 272.3 164 78.7
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 3.3e-71 271.9 171 78.4
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 9.7e-71 270.4 170 77.1
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 1.6e-70 269.6 166 75.9
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 4.8e-70 268.1 167 77.2
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 8.2e-70 267.3 165 75.2
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 8.2e-70 267.3 165 75.2
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 1.8e-69 266.2 206 65.5
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 3.1e-69 265.4 165 77.0
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 6.9e-69 264.2 166 77.1
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 9.0e-69 263.8 164 77.4
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.7e-67 259.6 168 76.2
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 3.8e-67 258.5 166 75.3
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 3.8e-67 258.5 185 69.7
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 6.5e-67 257.7 172 73.8
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 8.5e-67 257.3 155 80.0
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 8.5e-67 257.3 165 75.8
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 1.1e-66 256.9 163 74.8
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 1.4e-66 256.5 154 80.5
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 2.5e-66 255.8 163 74.2
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 2.5e-66 255.8 162 78.4
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 7.2e-66 254.2 171 76.0
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 1.2e-65 253.4 171 71.3
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 2.1e-65 252.7 162 75.3
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 2.7e-65 252.3 154 79.9
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 7.9e-65 250.8 162 73.5
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 1.8e-64 249.6 162 72.8
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 3.9e-64 248.4 166 74.1
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 5.1e-64 248.1 162 72.2
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 1.9e-63 246.1 172 70.9
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 7.4e-63 244.2 172 72.1
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 7.4e-63 244.2 182 65.9
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 2.2e-62 242.7 154 77.9
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 8.2e-62 240.7 150 77.3
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 2.4e-61 239.2 169 68.0
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 5.3e-61 238.0 172 65.7
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 3.4e-60 235.3 168 67.9
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 2.2e-59 232.6 168 67.3
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 2.9e-59 232.3 169 67.5
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 2.9e-59 232.3 167 66.5
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 2.9e-59 232.3 173 65.9
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 3.8e-59 231.9 163 68.1
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 1.9e-58 229.6 165 68.5
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 9.4e-58 227.3 172 64.5
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-57 226.9 169 66.9
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 7.9e-57 224.2 129 85.3
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 8.8e-56 220.7 172 64.5
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 8.8e-56 220.7 169 63.9
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 1.5e-55 219.9 167 64.7
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 2.6e-55 219.2 167 64.1
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 3.3e-55 218.8 155 69.7
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 4.4e-55 218.4 166 64.5
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 1.3e-54 216.9 172 63.4
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 1.3e-54 216.9 172 63.4
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 1.3e-54 216.9 172 63.4
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 1.3e-54 216.9 172 63.4
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 3.7e-54 215.3 171 60.8
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 4.8e-54 214.9 171 63.2
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 8.2e-54 214.2 172 63.4
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 8.2e-54 214.2 171 63.7
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 1.1e-53 213.8 172 63.4
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 1.1e-53 213.8 171 62.6
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 2.4e-53 212.6 171 62.0
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 2.4e-53 212.6 172 62.8
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 5.3e-53 211.5 174 62.1
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 5.3e-53 211.5 163 66.3
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 1.2e-52 210.3 171 62.6
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 1.2e-52 210.3 163 65.6
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 1.5e-52 209.9 171 60.8
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 2.6e-52 209.1 124 83.1
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 4.5e-52 208.4 174 62.6
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 5.9e-52 208.0 171 61.4
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 1.0e-51 207.2 174 62.6
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 1.0e-51 207.2 174 62.6
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 1.7e-51 206.5 163 60.7
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 3.0e-48 195.7 167 61.1
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 1.1e-47 193.7 170 57.6
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 1.5e-47 193.4 167 58.1
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 2.0e-47 193.0 114 80.7
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.7e-46 189.9 156 63.5
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 9.4e-42 174.1 172 54.7
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 1.5e-39 166.8 183 49.7
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 7.5e-39 164.5 183 50.3
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 9.7e-39 164.1 167 46.7
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-34 150.6 167 47.3
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 2.5e-34 149.4 182 41.8
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 2.3e-32 142.9 177 46.9
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 2.6e-31 139.4 177 46.9
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 1.8e-29 133.3 110 57.3
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 4.5e-28 128.6 165 46.7
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 2.3e-27 126.3 112 59.8
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 2.5e-26 122.9 179 39.7
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 4.2e-26 122.1 180 39.4
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 5.5e-26 121.7 176 44.3
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-25 120.6 187 39.0
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 1.2e-25 120.6 116 53.4
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 3.6e-25 119.0 76 72.4
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 3.0e-24 115.9 178 37.6
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 3.0e-24 115.9 70 81.4
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 8.9e-24 114.4 170 42.4
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 2.0e-23 113.2 137 41.6
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 2.2e-22 109.8 108 57.4
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 6.3e-22 108.2 142 41.5
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 3.1e-21 105.9 174 36.2
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 4.1e-21 105.5 167 37.7
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 9.2e-21 104.4 172 39.0
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 2.7e-20 102.8 75 69.3
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-19 100.5 136 40.4
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 3.8e-19 99.0 164 36.0
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 8.6e-19 97.8 158 37.3
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.5e-18 96.3 164 32.9
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 2.5e-18 96.3 71 70.4
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 1.4e-16 90.5 133 38.3
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 3.0e-16 89.4 109 46.8
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 6.8e-16 88.2 166 31.3
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 8.9e-16 87.8 153 32.7
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-15 87.0 183 31.7
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-15 85.9 166 31.3
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-15 85.9 173 32.9
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 5.8e-15 85.1 186 31.2
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 5.8e-15 85.1 111 45.9
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 6.4e-14 81.6 184 31.0
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 8.3e-14 81.3 146 33.6
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-13 80.9 104 41.3
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 4.1e-13 79.0 184 28.8
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 4.1e-13 79.0 46 78.3
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-12 76.3 161 29.2
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 4.6e-12 75.5 132 31.1
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 7.8e-12 74.7 126 38.1
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-11 73.9 131 30.5
Atru.chr5.2738 Acer truncatum HOM05D004737 ORTHO05D005623 9.5e-10 67.8 126 33.3
Atru.chr8.1290 Acer truncatum HOM05D004737 ORTHO05D005623 9.5e-10 67.8 174 31.0
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-09 67.0 132 31.8
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 1.1e-08 64.3 103 36.9
Atru.chr12.1394 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-07 60.8 129 30.2
Dinv01344 Davidia involucrata HOM05D065005 ORTHO05D005623 5.8e-07 58.5 31 83.9
Medtr5g038850 Medicago truncatula HOM05D004737 ORTHO05D005623 7.5e-07 58.2 128 30.5
Atru.chr6.94 Acer truncatum HOM05D004737 ORTHO05D005623 9.8e-07 57.8 64 48.4


User provided reference genes

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