Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 3.7e-51 204.5 100 100.0
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 1.9e-42 175.6 100 87.0
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 3.9e-40 167.9 98 84.7
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 1.5e-39 166.0 95 85.3
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 1.6e-38 162.5 97 78.4
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 2.1e-38 162.2 94 83.0
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 3.6e-38 161.4 97 77.3
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 8.1e-38 160.2 92 84.8
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 1.4e-37 159.5 95 80.0
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 1.8e-37 159.1 100 77.0
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 4.0e-37 157.9 94 80.9
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 4.0e-37 157.9 92 82.6
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 5.2e-37 157.5 147 59.2
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 1.5e-36 156.0 92 81.5
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 1.5e-36 156.0 92 81.5
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 1.5e-36 156.0 96 76.0
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 2.6e-36 155.2 94 80.9
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 5.8e-36 154.1 94 81.9
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 9.9e-36 153.3 96 77.1
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 1.3e-35 152.9 95 76.8
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 4.9e-35 151.0 93 79.6
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 4.9e-35 151.0 95 75.8
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 4.9e-35 151.0 96 75.0
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 8.4e-35 150.2 96 75.0
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 8.4e-35 150.2 96 75.0
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 1.4e-34 149.4 94 74.5
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 1.9e-34 149.1 94 75.5
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 3.2e-34 148.3 96 72.9
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 4.2e-34 147.9 93 77.4
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 4.2e-34 147.9 87 78.2
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 9.2e-34 146.7 94 73.4
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 9.2e-34 146.7 94 73.4
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 9.2e-34 146.7 94 73.4
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 9.2e-34 146.7 94 73.4
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 9.2e-34 146.7 94 73.4
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 1.6e-33 146.0 94 76.6
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 2.1e-33 145.6 96 71.9
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 2.7e-33 145.2 96 71.9
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 2.7e-33 145.2 94 75.5
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 2.7e-33 145.2 94 75.5
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 2.7e-33 145.2 96 70.8
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 3.5e-33 144.8 94 77.7
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 3.5e-33 144.8 99 72.7
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 4.6e-33 144.4 96 72.9
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 6.0e-33 144.1 96 72.9
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 6.0e-33 144.1 96 72.9
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 6.0e-33 144.1 96 72.9
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 7.8e-33 143.7 92 77.2
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 1.0e-32 143.3 96 70.8
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 1.0e-32 143.3 93 74.2
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 1.0e-32 143.3 99 67.7
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 1.7e-32 142.5 92 76.1
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 1.7e-32 142.5 96 74.0
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 1.7e-32 142.5 94 74.5
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 3.9e-32 141.4 94 74.5
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 5.1e-32 141.0 96 69.8
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 1.1e-31 139.8 96 68.8
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 1.1e-31 139.8 97 70.1
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 1.1e-31 139.8 93 73.1
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 1.5e-31 139.4 96 74.0
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 2.5e-31 138.7 95 71.6
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 3.3e-31 138.3 97 72.2
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 3.3e-31 138.3 98 70.4
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 4.3e-31 137.9 94 73.4
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 5.6e-31 137.5 96 69.8
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 7.3e-31 137.1 96 69.8
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 7.3e-31 137.1 96 69.8
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 2.1e-30 135.6 95 67.4
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 6.2e-30 134.0 92 71.7
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 1.4e-29 132.9 96 70.8
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 2.4e-29 132.1 92 68.5
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 4.0e-29 131.3 90 70.0
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 9.0e-29 130.2 98 69.4
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 9.0e-29 130.2 96 66.7
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 2.0e-28 129.0 97 67.0
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 2.6e-28 128.6 92 68.5
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 4.4e-28 127.9 90 68.9
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 4.4e-28 127.9 96 65.6
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 9.9e-28 126.7 134 53.0
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.3e-27 126.3 79 78.5
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 2.2e-27 125.6 95 66.3
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 8.4e-27 123.6 70 82.9
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 5.4e-26 120.9 103 61.2
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 3.5e-25 118.2 70 80.0
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 6.0e-25 117.5 168 42.9
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 3.0e-24 115.2 79 68.4
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 6.6e-24 114.0 88 65.9
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 8.7e-24 113.6 94 64.9
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 2.5e-23 112.1 71 74.6
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 4.8e-22 107.8 96 58.3
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 5.3e-21 104.4 89 61.8
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 9.0e-21 103.6 69 78.3
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 4.5e-20 101.3 67 73.1
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 3.8e-19 98.2 69 68.1
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 4.9e-19 97.8 71 63.4
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 1.9e-18 95.9 63 71.4
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 5.4e-18 94.4 67 71.6
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 9.3e-18 93.6 70 62.9
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 1.2e-17 93.2 49 87.8
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.8e-16 89.4 54 75.9
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 2.5e-15 85.5 49 71.4
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 7.4e-15 84.0 65 67.7
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 6.2e-14 80.9 50 82.0
HanXRQChr17g0533231 Helianthus annuus HOM05D007428 ORTHO05D009308 3.8e-11 71.6 59 69.5
CAN.G792.73 Capsicum annuum HOM05D003118 ORTHO05D009308 2.7e-09 65.5 44 77.3
Haze_08759 Corylus avellana HOM05D007428 ORTHO05D009308 3.3e-07 58.5 28 92.9


User provided reference genes

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