Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37242 Davidia involucrata HOM05D004552 ORTHO05D005501 5.8e-215 750.7 411 100.0
Actinidia19722 Actinidia chinensis HOM05D004552 ORTHO05D005501 2.0e-183 646.0 411 86.4
Rhsim10G0168100 Rhododendron simsii HOM05D004552 ORTHO05D005501 9.3e-173 610.5 411 83.0
Rhsim11G0041500 Rhododendron simsii HOM05D004552 ORTHO05D005501 1.8e-171 606.3 411 82.5
Rhsim11G0041800 Rhododendron simsii HOM05D004552 ORTHO05D005501 2.4e-168 595.9 409 81.7
CSS0033785 Camellia sinensis var. sinensis HOM05D004552 ORTHO05D005501 4.0e-168 595.1 411 81.0
Oeu029550.1 Olea europaea HOM05D004552 ORTHO05D005501 2.0e-167 592.8 411 81.8
Oeu026072.1 Olea europaea HOM05D004552 ORTHO05D005501 3.7e-161 572.0 409 78.7
MSTRG.16520 Avicennia marina HOM05D004552 ORTHO05D005501 1.9e-157 559.7 411 76.9
Cc00_g23990 Coffea canephora HOM05D004552 ORTHO05D005501 1.6e-153 546.6 411 76.9
Nitab4.5_0008076g0010 Nicotiana tabacum HOM05D004552 ORTHO05D005501 3.7e-153 545.4 412 77.7
TAR369G0596 Trochodendron aralioides HOM05D004552 ORTHO05D005501 9.0e-152 540.8 419 76.4
Peaxi162Scf00569g00015 Petunia axillaris HOM05D004552 ORTHO05D005501 2.9e-150 535.8 412 76.7
CAN.G525.45 Capsicum annuum HOM05D004552 ORTHO05D005501 3.2e-149 532.3 412 76.7
Sopen02g031920 Solanum pennellii HOM05D004552 ORTHO05D005501 5.1e-147 525.0 412 75.7
Nitab4.5_0006780g0010 Nicotiana tabacum HOM05D004552 ORTHO05D005501 4.3e-146 521.9 412 73.8
Nitab4.5_0001952g0150 Nicotiana tabacum HOM05D004552 ORTHO05D005501 9.7e-146 520.8 412 75.0
Thecc.05G052700 Theobroma cacao HOM05D004552 ORTHO05D005501 2.4e-144 516.2 417 73.6
Nitab4.5_0005206g0040 Nicotiana tabacum HOM05D004552 ORTHO05D005501 3.1e-144 515.8 412 74.5
Solyc02g087180.4 Solanum lycopersicum HOM05D004552 ORTHO05D005501 3.1e-144 515.8 410 74.9
DCAR_009290 Daucus carota HOM05D004552 ORTHO05D005501 1.5e-143 513.5 413 73.1
Ciclev10011831m.g Citrus clementina HOM05D004552 ORTHO05D005501 4.5e-143 511.9 423 71.2
ClCG04G008790 Citrullus lanatus HOM05D004552 ORTHO05D005501 2.5e-141 506.1 410 72.9
Solyc04g014240.1 Solanum lycopersicum HOM05D004552 ORTHO05D005501 3.2e-141 505.8 412 73.8
TWI53G0358 Tripterygium wilfordii HOM05D004552 ORTHO05D005501 1.6e-140 503.4 422 73.7
Sopen04g006350 Solanum pennellii HOM05D004552 ORTHO05D005501 2.1e-140 503.1 412 73.5
PGR004G2024 Punica granatum HOM05D004552 ORTHO05D005501 3.6e-140 502.3 413 73.8
Sed0010830 Sechium edule HOM05D004552 ORTHO05D005501 3.9e-139 498.8 408 72.8
HanXRQChr05g0156781 Helianthus annuus HOM05D004552 ORTHO05D005501 5.7e-138 495.0 412 71.8
Hund08942 Selenicereus undatus HOM05D004552 ORTHO05D005501 5.7e-138 495.0 415 70.8
Lsat_1_v5_gn_5_8941 Lactuca sativa HOM05D004552 ORTHO05D005501 2.8e-137 492.7 412 71.4
CAN.G206.55 Capsicum annuum HOM05D004552 ORTHO05D005501 8.2e-137 491.1 412 72.3
Cfa017496 Carpinus fangiana HOM05D004552 ORTHO05D005501 3.1e-136 489.2 409 72.6
MELO3C014263.2 Cucumis melo HOM05D004552 ORTHO05D005501 4.1e-136 488.8 410 71.0
Migut.K00511 Erythranthe guttata HOM05D004552 ORTHO05D005501 5.3e-136 488.4 413 69.7
Atru.chr8.2543 Acer truncatum HOM05D004552 ORTHO05D005501 1.5e-135 486.9 421 69.4
Nn1g07079 Nelumbo nucifera HOM05D004552 ORTHO05D005501 1.5e-135 486.9 432 69.9
Duzib106G1297 Durio zibethinus HOM05D004552 ORTHO05D005501 4.5e-135 485.3 412 70.9
Haze_20666 Corylus avellana HOM05D004552 ORTHO05D005501 5.9e-135 485.0 412 73.1
AUR62025361 Chenopodium quinoa HOM05D004552 ORTHO05D005501 1.3e-134 483.8 414 68.6
CiPaw.09G181100 Carya illinoinensis HOM05D004552 ORTHO05D005501 2.2e-134 483.0 411 72.0
ClCG10G016170 Citrullus lanatus HOM05D004552 ORTHO05D005501 3.8e-134 482.3 401 71.8
SalBow4G1233 Salvia bowleyana HOM05D004552 ORTHO05D005501 3.8e-134 482.3 410 68.0
EL10Ac7g16819 Beta vulgaris HOM05D004552 ORTHO05D005501 6.5e-134 481.5 414 68.8
QL07p045485 Quercus lobata HOM05D004552 ORTHO05D005501 1.1e-133 480.7 423 70.0
CsaV3_4G024350 Cucumis sativus L. HOM05D004552 ORTHO05D005501 1.5e-133 480.3 410 70.7
ECA246G2681 Erigeron canadensis HOM05D003206 ORTHO05D005207 2.5e-133 479.6 414 71.5
AUR62028362 Chenopodium quinoa HOM05D004552 ORTHO05D005501 9.4e-133 477.6 414 68.6
DCAR_002493 Daucus carota HOM05D004552 ORTHO05D005501 2.1e-132 476.5 413 68.8
PSO832G0086 Papaver somniferum HOM05D004552 ORTHO05D005501 8.0e-132 474.6 424 67.2
PSO210G6420 Papaver somniferum HOM05D004552 ORTHO05D005501 2.3e-131 473.0 420 67.4
Ca_22379_v3 Cicer arietinum L. HOM05D004552 ORTHO05D005501 5.2e-131 471.9 409 69.9
Lj3g0026232 Lotus japonicus HOM05D004552 ORTHO05D005501 8.8e-131 471.1 408 68.9
Lj5g0019559 Lotus japonicus HOM05D004552 ORTHO05D005501 2.6e-130 469.5 408 68.6
Ah.14g084480 Amaranthus hybridus HOM05D004552 ORTHO05D005501 3.3e-130 469.2 414 66.7
Ca_19605_v3 Cicer arietinum L. HOM05D004552 ORTHO05D005501 3.3e-130 469.2 409 69.9
RcHm_v2.0_Chr1g0360161 Rosa chinensis HOM05D004552 ORTHO05D005501 5.7e-130 468.4 419 67.3
unitig_899.g15236 Utricularia gibba HOM05D004552 ORTHO05D005501 5.7e-130 468.4 417 68.6
Lj4g0012826 Lotus japonicus HOM05D004552 ORTHO05D005501 7.4e-130 468.0 408 68.6
Gohir.A03G063400 Gossypium hirsutum HOM05D004552 ORTHO05D005501 1.1e-128 464.2 354 75.4
Prupe.2G197600 Prunus persica HOM05D004552 ORTHO05D005501 1.2e-127 460.7 410 69.3
Manes.09G079900 Manihot esculenta HOM05D004552 ORTHO05D005501 1.6e-127 460.3 410 66.1
Gorai.003G108400 Gossypium raimondii HOM05D004552 ORTHO05D005501 3.5e-127 459.1 354 75.1
Medtr6g089780 Medicago truncatula HOM05D004552 ORTHO05D005501 3.5e-127 459.1 409 68.0
TPR.G33503 Trifolium pratense HOM05D004552 ORTHO05D005501 4.5e-127 458.8 409 68.2
Cc03_g15870 Coffea canephora HOM05D004552 ORTHO05D005501 5.9e-127 458.4 411 68.4
Gohir.D03G102900 Gossypium hirsutum HOM05D004552 ORTHO05D005501 1.7e-126 456.8 354 74.9
arahy.Tifrunner.gnm1.ann1.CZIV0N Arachis hypogaea HOM05D004552 ORTHO05D005501 3.8e-126 455.7 412 69.4
Medtr8g075790 Medicago truncatula HOM05D004552 ORTHO05D005501 3.8e-126 455.7 411 68.4
arahy.Tifrunner.gnm1.ann1.LN9G9C Arachis hypogaea HOM05D004552 ORTHO05D005501 1.9e-125 453.4 412 69.2
arahy.Tifrunner.gnm1.ann1.6MTV2V Arachis hypogaea HOM05D004552 ORTHO05D005501 2.5e-125 453.0 412 69.2
arahy.Tifrunner.gnm1.ann1.URH0Q0 Arachis hypogaea HOM05D004552 ORTHO05D005501 5.5e-125 451.8 412 68.7
Lalb_Chr05g0229841 Lupinus albus HOM05D004552 ORTHO05D005501 2.7e-124 449.5 408 66.9
Glyma.08G287300 Glycine max HOM05D004552 ORTHO05D005501 6.1e-124 448.4 406 68.7
Psat7g019080 Pisum sativum HOM05D004552 ORTHO05D005501 1.0e-123 447.6 428 66.1
Potri.016G084200 Populus trichocarpa HOM05D004552 ORTHO05D005501 1.0e-123 447.6 413 68.0
Manes.08G002200 Manihot esculenta HOM05D004552 ORTHO05D005501 3.0e-123 446.0 414 66.7
COL.COLO4_27097 Corchorus olitorius HOM05D004552 ORTHO05D005501 1.2e-122 444.1 342 76.9
RcHm_v2.0_Chr1g0361081 Rosa chinensis HOM05D004552 ORTHO05D005501 1.2e-122 444.1 408 65.2
THA.LOC104823245 Tarenaya hassleriana HOM05D004552 ORTHO05D005501 1.5e-122 443.7 433 65.4
PGSC0003DMG400000510 Solanum tuberosum HOM05D004552 ORTHO05D005501 2.0e-122 443.4 335 77.6
Glyma.06G188800 Glycine max HOM05D004552 ORTHO05D005501 2.4e-120 436.4 406 67.2
VMungo0251G2800 Vigna mungo HOM05D004552 ORTHO05D005501 9.1e-120 434.5 405 65.9
CANSAT56G3582 Cannabis sativa HOM05D004552 ORTHO05D005501 1.6e-119 433.7 403 68.7
Phvul.003G261400 Phaseolus vulgaris HOM05D004552 ORTHO05D005501 1.6e-119 433.7 406 68.2
FvH4_7g16920 Fragaria vesca HOM05D004552 ORTHO05D005501 2.7e-119 433.0 419 63.7
Sc07g0006230 Simmondsia chinensis HOM05D004552 ORTHO05D005501 1.7e-118 430.3 418 65.3
FAN01G0370 Fragaria x ananassa HOM05D004552 ORTHO05D005501 5.0e-118 428.7 419 63.2
FAN03G3426 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.1e-117 427.6 420 63.1
FAN06G4506 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.5e-117 427.2 419 63.2
Glyma.13G067700 Glycine max HOM05D004552 ORTHO05D005501 5.5e-117 425.2 406 66.0
FvH4_7g17650 Fragaria vesca HOM05D004552 ORTHO05D005501 6.1e-116 421.8 412 64.8
Lj6g0002066 Lotus japonicus HOM05D004552 ORTHO05D005501 6.1e-116 421.8 409 63.1
vmacro04719 Vaccinium macrocarpon HOM05D004552 ORTHO05D005501 1.0e-115 421.0 324 75.3
Thhalv10013588m.g Eutrema salsugineum HOM05D004552 ORTHO05D005501 5.7e-114 415.2 441 61.5
FAN06G3324 Fragaria x ananassa HOM05D004552 ORTHO05D005501 5.7e-114 415.2 405 63.2
Sp6g39730 Schrenkiella parvula HOM05D004552 ORTHO05D005501 8.3e-113 411.4 435 62.5
CARHR210480 Cardamine hirsuta HOM05D004552 ORTHO05D005501 3.1e-112 409.5 435 61.6
Aqoxy4G02198 Aquilegia oxysepala HOM05D004552 ORTHO05D005501 5.9e-111 405.2 439 61.3
BcaC06g32015 Brassica carinata HOM05D004552 ORTHO05D005501 7.7e-111 404.8 428 60.7
TPR.G27980 Trifolium pratense HOM05D004552 ORTHO05D005501 1.0e-110 404.4 331 67.7
FAN03G1811 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.7e-110 403.7 408 62.3
Manes.09G080009 Manihot esculenta HOM05D004552 ORTHO05D005501 2.9e-110 402.9 341 68.3
FAN06G0991 Fragaria x ananassa HOM05D004552 ORTHO05D005501 8.6e-110 401.4 408 62.7
SGA_v2.0_scaffold204G41624 Striga asiatica HOM05D004552 ORTHO05D005501 8.6e-110 401.4 420 63.1
C09p73810 Brassica napus HOM05D004552 ORTHO05D005501 1.5e-109 400.6 434 59.7
BolC9t60115H Brassica oleracea HOM05D004552 ORTHO05D005501 1.5e-109 400.6 434 59.7
AT5G02850 Arabidopsis thaliana HOM05D004552 ORTHO05D005501 3.3e-109 399.4 434 60.6
CDE04G3741 Ceratophyllum demersum HOM05D004552 ORTHO05D005501 2.1e-108 396.7 423 61.0
Lj6g0014683 Lotus japonicus HOM05D004552 ORTHO05D005501 1.4e-107 394.0 363 64.5
AL6G12120 Arabidopsis lyrata HOM05D004552 ORTHO05D005501 5.2e-107 392.1 435 61.1
Aa31LG1G22060 Aethionema arabicum HOM05D004552 ORTHO05D005501 6.8e-107 391.7 438 58.2
Carub.0006s0165 Capsella rubella HOM05D004552 ORTHO05D005501 1.3e-105 387.5 439 59.2
A10p32880 Brassica napus HOM05D004552 ORTHO05D005501 2.2e-105 386.7 435 59.1
Sabra16G0091200 Salix brachista HOM05D004552 ORTHO05D005501 8.3e-105 384.8 339 69.9
arahy.Tifrunner.gnm1.ann1.52IM1F Arachis hypogaea HOM05D004552 ORTHO05D005501 1.1e-104 384.4 323 72.4
SHI12593 Sapria himalayana HOM05D004552 ORTHO05D005501 1.7e-102 377.1 410 59.3
Psat4g100360 Pisum sativum HOM05D004552 ORTHO05D005501 2.3e-102 376.7 351 67.8
Lj6g0013650 Lotus japonicus HOM05D004552 ORTHO05D005501 2.5e-101 373.2 408 58.8
MBI18_g25517_MAGBIO Magnolia biondii HOM05D004552 ORTHO05D005501 2.9e-97 359.8 353 66.3
Eucgr.J03059 Eucalyptus grandis HOM05D004552 ORTHO05D005501 4.9e-97 359.0 442 55.9
PSO675G1725 Papaver somniferum HOM05D004552 ORTHO05D005501 1.2e-95 354.4 382 58.1
RhsimUnG0119000 Rhododendron simsii HOM05D004552 ORTHO05D005501 4.0e-91 339.3 242 79.3
SGA_v2.0_scaffold94G28661 Striga asiatica HOM05D004552 ORTHO05D005501 1.5e-90 337.4 344 64.5
Os09g0540500 Oryza sativa ssp. japonica HOM05D004552 ORTHO05D005501 2.7e-79 300.1 429 49.4
HPP92_012944 Vanilla planifolia HOM05D004552 ORTHO05D005501 2.3e-78 297.0 348 55.5
ATR0950G002 Amborella trichopoda HOM05D004552 ORTHO05D005501 3.9e-78 296.2 370 55.1
ATR0594G066 Amborella trichopoda HOM05D004552 ORTHO05D005501 5.1e-78 295.8 370 55.4
FAN01G0473 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.9e-77 293.9 404 53.2
CSS0042772 Camellia sinensis var. sinensis HOM05D004552 ORTHO05D005501 9.6e-77 291.6 228 72.4
Zm00001eb103820 Zea mays HOM05D004552 ORTHO05D005501 7.3e-69 265.4 422 46.0
CDE07G0444 Ceratophyllum demersum HOM05D004552 ORTHO05D005501 1.5e-66 257.7 325 53.5
Actinidia11233 Actinidia chinensis HOM05D004552 ORTHO05D005501 1.0e-62 245.0 335 53.1
SEGI_01207 Sequoiadendron giganteum HOM05D004552 ORTHO05D005501 1.0e-62 245.0 425 42.4
A03p00930 Brassica napus HOM05D004552 ORTHO05D005501 6.2e-52 209.1 208 61.5
BcaB01g05872 Brassica carinata HOM05D004552 ORTHO05D005501 7.6e-50 202.2 280 49.6
THA.LOC104827455 Tarenaya hassleriana HOM05D004552 ORTHO05D005501 1.3e-49 201.4 213 60.1
C03p01200 Brassica napus HOM05D004552 ORTHO05D005501 1.4e-48 198.0 281 53.7
BolC3t12680H Brassica oleracea HOM05D004552 ORTHO05D005501 1.4e-48 198.0 281 53.7
FvH4_6g20640 Fragaria vesca HOM05D004552 ORTHO05D005501 1.9e-48 197.6 247 51.0
Mapoly0007s0084 Marchantia polymorpha HOM05D004552 ORTHO05D005501 2.1e-44 184.1 393 40.7
FAN14G1867 Fragaria x ananassa HOM05D004552 ORTHO05D005501 5.3e-43 179.5 317 41.3
SEGI_11500 Sequoiadendron giganteum HOM05D004552 ORTHO05D005501 2.2e-41 174.1 341 41.9
PGSC0003DMG400023633 Solanum tuberosum HOM05D004552 ORTHO05D005501 5.5e-40 169.5 225 51.6
Pp3c14_11490 Physcomitrium patens HOM05D004552 ORTHO05D005501 2.5e-37 160.6 409 36.4
Lsat_1_v5_gn_8_95200 Lactuca sativa HOM05D004552 ORTHO05D005501 4.8e-36 156.4 102 80.4
AagrBONN_evm.TU.Sc2ySwM_362.1766 Anthoceros agrestis HOM05D004552 ORTHO05D005501 1.1e-35 155.2 388 37.1
BraA03t09475Z Brassica rapa HOM05D004552 ORTHO05D005501 1.5e-34 151.4 214 47.2
Lj3E543T1 Lonicera japonica HOM05D004552 ORTHO05D005501 3.0e-30 137.1 123 74.8
VMungo0647G0506 Vigna mungo HOM05D004552 ORTHO05D005501 1.7e-28 131.3 109 67.9
BraA10t45325Z Brassica rapa HOM05D001414 ORTHO05D000619 2.8e-28 130.6 152 61.2
CBR_g38095 Chara braunii HOM05D004552 ORTHO05D005501 1.2e-23 115.2 249 32.9
Lsat_1_v5_gn_8_95180 Lactuca sativa HOM05D004552 ORTHO05D005501 3.5e-18 97.1 70 74.3
AagrBONN_evm.TU.Sc2ySwM_344.2458 Anthoceros agrestis HOM05D004552 ORTHO05D005501 6.3e-12 76.3 239 25.9
MCO09G463 Micromonas commoda HOM05D004552 ORTHO05D005501 1.9e-08 64.7 122 37.7
Nitab4.5_0006780g0020 Nicotiana tabacum HOM05D004552 ORTHO05D005501 1.9e-08 64.7 44 72.7
Cpa.g.sc10.80 Carica papaya HOM05D004552 ORTHO05D005501 6.1e-07 59.7 63 60.3


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