Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37027 Davidia involucrata HOM05D006453 ORTHO05D008280 4.9e-299 1030.4 535 100.0
CSS0043580 Camellia sinensis var. sinensis HOM05D006453 ORTHO05D008280 1.5e-170 603.6 509 66.6
QL07p016723 Quercus lobata HOM05D006453 ORTHO05D008280 1.1e-168 597.4 510 65.1
CSS0021093 Camellia sinensis var. sinensis HOM05D006453 ORTHO05D008280 2.4e-168 596.3 509 66.2
Haze_20390 Corylus avellana HOM05D006453 ORTHO05D008280 4.0e-168 595.5 510 65.1
TAR636G0230 Trochodendron aralioides HOM05D006453 ORTHO05D008280 2.9e-158 562.8 526 62.9
TAR633G1955 Trochodendron aralioides HOM05D006453 ORTHO05D008280 3.8e-158 562.4 528 63.4
Cfa019867 Carpinus fangiana HOM05D006453 ORTHO05D008280 1.1e-157 560.8 517 62.7
Prupe.7G017200 Prunus persica HOM05D006453 ORTHO05D008280 1.4e-157 560.5 514 61.7
Thecc.05G240300 Theobroma cacao HOM05D006453 ORTHO05D008280 7.9e-156 554.7 515 61.4
Manes.08G151700 Manihot esculenta HOM05D006453 ORTHO05D008280 5.8e-151 538.5 543 58.9
Ciclev10030654m.g Citrus clementina HOM05D006453 ORTHO05D008280 1.3e-150 537.3 533 58.7
Gohir.A08G220800 Gossypium hirsutum HOM05D006453 ORTHO05D008280 6.0e-148 528.5 522 59.8
Gorai.004G252900 Gossypium raimondii HOM05D006453 ORTHO05D008280 8.7e-147 524.6 516 59.5
CiPaw.09G165800 Carya illinoinensis HOM05D006453 ORTHO05D008280 1.5e-146 523.9 540 58.1
Gohir.D08G237400 Gossypium hirsutum HOM05D006453 ORTHO05D008280 1.3e-145 520.8 516 59.1
TWI32G1104 Tripterygium wilfordii HOM05D006453 ORTHO05D008280 2.2e-145 520.0 509 59.1
MD14G1010700 Malus domestica HOM05D006453 ORTHO05D008280 2.9e-142 509.6 510 56.9
MD12G1012900 Malus domestica HOM05D006453 ORTHO05D008280 1.4e-141 507.3 510 57.3
Oeu044203.1 Olea europaea HOM05D006453 ORTHO05D008280 4.2e-141 505.8 516 58.3
Atru.chr2.1559 Acer truncatum HOM05D006453 ORTHO05D008280 7.9e-140 501.5 533 56.1
COL.COLO4_20073 Corchorus olitorius HOM05D006453 ORTHO05D008280 3.0e-139 499.6 515 57.1
Potri.013G067200 Populus trichocarpa HOM05D006453 ORTHO05D008280 3.0e-139 499.6 550 55.1
Duzib177G0835 Durio zibethinus HOM05D006453 ORTHO05D008280 4.3e-138 495.7 515 57.9
Cpa.g.sc73.5 Carica papaya HOM05D006453 ORTHO05D008280 9.7e-138 494.6 533 56.1
Rhsim03G0046400 Rhododendron simsii HOM05D006453 ORTHO05D008280 8.2e-137 491.5 547 55.8
ClCG10G017040 Citrullus lanatus HOM05D006453 ORTHO05D008280 4.5e-135 485.7 515 57.3
MBI19_g44505_MAGBIO Magnolia biondii HOM05D006453 ORTHO05D008280 3.2e-133 479.6 518 57.5
Nitab4.5_0001330g0010 Nicotiana tabacum HOM05D006453 ORTHO05D008280 6.1e-132 475.3 515 57.7
CsaV3_3G039350 Cucumis sativus L. HOM05D006453 ORTHO05D008280 2.6e-130 469.9 515 55.7
FAN15G3048 Fragaria x ananassa HOM05D006453 ORTHO05D008280 2.6e-130 469.9 509 55.4
RcHm_v2.0_Chr3g0495901 Rosa chinensis HOM05D006453 ORTHO05D008280 3.3e-130 469.5 509 55.8
Lalb_Chr22g0358481 Lupinus albus HOM05D006453 ORTHO05D008280 4.4e-130 469.2 543 54.7
FvH4_2g05470 Fragaria vesca HOM05D006453 ORTHO05D008280 7.4e-130 468.4 509 55.4
MELO3C009680.2 Cucumis melo HOM05D006453 ORTHO05D008280 2.8e-129 466.5 515 55.3
Peaxi162Scf00563g00316 Petunia axillaris HOM05D006453 ORTHO05D008280 9.1e-128 461.5 513 54.8
Sed0009752 Sechium edule HOM05D006453 ORTHO05D008280 8.5e-126 454.9 519 55.1
Glyma.03G007200 Glycine max HOM05D006453 ORTHO05D008280 8.0e-124 448.4 517 53.6
PGR042G0732 Punica granatum HOM05D006453 ORTHO05D008280 1.8e-123 447.2 516 54.5
DCAR_020643 Daucus carota HOM05D006453 ORTHO05D008280 2.6e-122 443.4 541 52.5
Actinidia37830 Actinidia chinensis HOM05D006453 ORTHO05D008280 3.3e-122 443.0 507 52.9
PGSC0003DMG400010935 Solanum tuberosum HOM05D006453 ORTHO05D008280 6.3e-121 438.7 517 52.2
Glyma.19G118900 Glycine max HOM05D006453 ORTHO05D008280 4.1e-120 436.0 518 52.1
Sopen01g023080 Solanum pennellii HOM05D006453 ORTHO05D008280 1.7e-118 430.6 517 50.9
Lj2C416G9 Lonicera japonica HOM05D006453 ORTHO05D008280 3.8e-118 429.5 520 53.5
Solyc01g057780.3 Solanum lycopersicum HOM05D006453 ORTHO05D008280 4.2e-117 426.0 517 50.7
Ca_03446_v3 Cicer arietinum L. HOM05D006453 ORTHO05D008280 4.0e-115 419.5 509 50.9
CAN.G595.6 Capsicum annuum HOM05D006453 ORTHO05D008280 1.7e-113 414.1 514 51.6
Eucgr.K02987 Eucalyptus grandis HOM05D006453 ORTHO05D008280 1.8e-112 410.6 510 49.6
Phvul.001G107100 Phaseolus vulgaris HOM05D006453 ORTHO05D008280 5.3e-112 409.1 513 50.7
Psat3g085600 Pisum sativum HOM05D006453 ORTHO05D008280 6.5e-110 402.1 508 50.8
VMungo1383G3098 Vigna mungo HOM05D006453 ORTHO05D008280 8.5e-110 401.7 515 50.3
arahy.Tifrunner.gnm1.ann1.I1EK11 Arachis hypogaea HOM05D006453 ORTHO05D008280 1.6e-108 397.5 527 48.6
vmacro07642 Vaccinium macrocarpon HOM05D006453 ORTHO05D008280 1.4e-107 394.4 502 50.0
Lj1g0022011 Lotus japonicus HOM05D006453 ORTHO05D008280 4.4e-106 389.4 541 48.4
arahy.Tifrunner.gnm1.ann1.5FGX2C Arachis hypogaea HOM05D006453 ORTHO05D008280 1.3e-105 387.9 527 47.8
TPR.G7838 Trifolium pratense HOM05D006453 ORTHO05D008280 2.2e-105 387.1 509 47.7
PSO675G7297 Papaver somniferum HOM05D006453 ORTHO05D008280 1.7e-102 377.5 483 52.4
Eucgr.A02151 Eucalyptus grandis HOM05D006453 ORTHO05D008280 5.0e-102 375.9 510 48.0
THA.LOC104820798 Tarenaya hassleriana HOM05D006453 ORTHO05D008280 1.6e-100 370.9 509 47.5
PSO541G6198 Papaver somniferum HOM05D006453 ORTHO05D008280 2.3e-99 367.1 484 51.4
GSVIVG01029939001 Vitis vinifera HOM05D006453 ORTHO05D008280 3.6e-92 343.2 462 48.7
Aqoxy7G02016 Aquilegia oxysepala HOM05D006453 ORTHO05D008280 5.2e-91 339.3 471 48.6
Medtr7g087047 Medicago truncatula HOM05D006453 ORTHO05D008280 7.0e-88 328.9 764 34.9
Os01g0815700 Oryza sativa ssp. japonica HOM05D006453 ORTHO05D008280 3.7e-81 306.6 645 36.1
SalBow1G7395 Salvia bowleyana HOM05D006453 ORTHO05D008280 1.1e-80 305.1 438 46.8
Zm00001eb369080 Zea mays HOM05D006453 ORTHO05D008280 1.2e-79 301.6 574 38.0
Sc07g0007630 Simmondsia chinensis HOM05D006453 ORTHO05D008280 3.5e-79 300.1 514 41.2
AL6G28880 Arabidopsis lyrata HOM05D006453 ORTHO05D008280 3.9e-78 296.6 509 42.0
MSTRG.6251 Avicennia marina HOM05D006453 ORTHO05D008280 6.6e-78 295.8 351 50.7
Sp6g26460 Schrenkiella parvula HOM05D006453 ORTHO05D008280 6.6e-78 295.8 508 41.5
Carub.0006s1602 Capsella rubella HOM05D006453 ORTHO05D008280 1.5e-77 294.7 508 41.7
Dinv14566 Davidia involucrata HOM05D001832 ORTHO05D001861 4.3e-77 293.1 202 77.2
ATR0068G066 Amborella trichopoda HOM05D006453 ORTHO05D008280 9.5e-77 292.0 788 33.9
Zm00001eb149830 Zea mays HOM05D006453 ORTHO05D008280 2.8e-76 290.4 588 36.4
Thhalv10012756m.g Eutrema salsugineum HOM05D006453 ORTHO05D008280 3.1e-75 287.0 509 41.5
CARHR195380 Cardamine hirsuta HOM05D006453 ORTHO05D008280 1.5e-74 284.6 508 42.1
AT5G17790 Arabidopsis thaliana HOM05D006453 ORTHO05D008280 2.0e-74 284.3 508 40.6
ECA246G3617 Erigeron canadensis HOM05D006453 ORTHO05D008280 2.9e-73 280.4 370 51.1
A03p08490 Brassica napus HOM05D006453 ORTHO05D008280 1.4e-72 278.1 508 40.7
BraA03t10172Z Brassica rapa HOM05D006453 ORTHO05D008280 1.9e-72 277.7 508 40.6
BraA10t44228Z Brassica rapa HOM05D006453 ORTHO05D008280 3.5e-71 273.5 507 39.1
A10p21660 Brassica napus HOM05D006453 ORTHO05D008280 4.6e-71 273.1 507 39.4
BcaB01g04912 Brassica carinata HOM05D006453 ORTHO05D008280 6.0e-71 272.7 514 40.7
C03p09890 Brassica napus HOM05D006453 ORTHO05D008280 6.0e-71 272.7 508 40.0
BcaB08g36744 Brassica carinata HOM05D006453 ORTHO05D008280 1.7e-70 271.2 508 39.6
BcaB01g05155 Brassica carinata HOM05D006453 ORTHO05D008280 2.3e-70 270.8 508 39.8
BolC3t13477H Brassica oleracea HOM05D006453 ORTHO05D008280 2.3e-70 270.8 508 39.8
Dinv14567 Davidia involucrata HOM05D006453 ORTHO05D008280 1.9e-69 267.7 190 77.9
AUR62036516 Chenopodium quinoa HOM05D006453 ORTHO05D008280 3.3e-69 266.9 329 49.5
AUR62037057 Chenopodium quinoa HOM05D006453 ORTHO05D008280 1.1e-67 261.9 504 36.5
HanXRQChr08g0233621 Helianthus annuus HOM05D006453 ORTHO05D008280 2.0e-66 257.7 293 52.6
Lsat_1_v5_gn_5_2441 Lactuca sativa HOM05D006453 ORTHO05D008280 2.0e-66 257.7 365 45.2
Aa31LG11G11790 Aethionema arabicum HOM05D006453 ORTHO05D008280 2.2e-65 254.2 508 38.2
C09p59360 Brassica napus HOM05D006453 ORTHO05D008280 2.9e-65 253.8 507 38.9
BolC9t58775H Brassica oleracea HOM05D006453 ORTHO05D008280 2.9e-65 253.8 507 38.9
Ah.02g116050 Amaranthus hybridus HOM05D006453 ORTHO05D008280 3.8e-65 253.4 308 51.0
CDE04G2250 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 5.4e-64 249.6 414 41.5
Hund15183 Selenicereus undatus HOM05D006453 ORTHO05D008280 1.3e-62 245.0 287 50.9
Nn3g20153 Nelumbo nucifera HOM05D006453 ORTHO05D008280 1.1e-61 241.9 466 39.5
EL10Ac5g11680 Beta vulgaris HOM05D006453 ORTHO05D008280 9.6e-61 238.8 496 37.5
unitig_37.g12689 Utricularia gibba HOM05D006453 ORTHO05D008280 8.1e-60 235.7 339 46.3
Sabra13G0058600 Salix brachista HOM05D006453 ORTHO05D008280 3.1e-59 233.8 510 35.9
Migut.K00219 Erythranthe guttata HOM05D006453 ORTHO05D008280 3.8e-57 226.9 304 46.7
HPP92_017897 Vanilla planifolia HOM05D006453 ORTHO05D008280 5.6e-53 213.0 386 40.4
Nitab4.5_0022362g0010 Nicotiana tabacum HOM05D006453 ORTHO05D008280 5.3e-51 206.5 238 53.8
SGA_v2.0_scaffold12G06081 Striga asiatica HOM05D006453 ORTHO05D008280 1.8e-43 181.4 336 41.4
ECA240G3357 Erigeron canadensis HOM05D006453 ORTHO05D008280 2.4e-43 181.0 333 38.4
HanXRQChr03g0076821 Helianthus annuus HOM05D006453 ORTHO05D008280 1.0e-33 149.1 285 41.1
Lsat_1_v5_gn_9_93321 Lactuca sativa HOM05D006453 ORTHO05D008280 8.7e-30 136.0 289 38.4
FAN27G0370 Fragaria x ananassa HOM05D006453 ORTHO05D008280 2.8e-28 131.0 130 56.2
CDE04G0989 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 3.1e-27 127.5 707 26.2
Cc06_g21620 Coffea canephora HOM05D006453 ORTHO05D008280 9.0e-27 125.9 112 62.5
CDE02G4069 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 2.5e-24 117.9 121 58.7
THA.LOC104798844 Tarenaya hassleriana HOM05D006453 ORTHO05D008280 3.1e-19 100.9 114 51.8
vmacro21284 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 2.2e-17 94.7 74 66.2
Aa31LG2G1800 Aethionema arabicum HOM05D006453 ORTHO05D008280 5.0e-17 93.6 48 89.6
SHI14865 Sapria himalayana HOM05D006453 ORTHO05D008280 1.1e-13 82.4 57 66.7
CDE07G0333 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 1.8e-11 75.1 295 27.8


User provided reference genes

Program Settings