Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36867 Davidia involucrata HOM05D002720 ORTHO05D002901 1.9e-32 142.5 94 100.0
Dinv44630 Davidia involucrata HOM05D002720 ORTHO05D002901 8.5e-09 63.9 37 86.5
Lj6C656T10 Lonicera japonica HOM05D002720 ORTHO05D002901 4.2e-08 61.6 37 81.1
Rhsim04G0192700 Rhododendron simsii HOM05D002720 ORTHO05D002901 7.2e-08 60.8 37 83.8
Rhsim04G0190900 Rhododendron simsii HOM05D002720 ORTHO05D002901 2.1e-07 59.3 37 81.1
vmacro08613 Vaccinium macrocarpon HOM05D002720 ORTHO05D002901 2.1e-07 59.3 37 81.1
MELO3C026776.2 Cucumis melo HOM05D002720 ORTHO05D002901 4.7e-07 58.2 37 75.7
CsaV3_2G013070 Cucumis sativus L. HOM05D002720 ORTHO05D002901 4.7e-07 58.2 37 75.7
Hma1.2p1_0065F.1_g035630 Hydrangea macrophylla HOM05D002720 ORTHO05D002901 4.7e-07 58.2 37 81.1
Sed0027773 Sechium edule HOM05D002720 ORTHO05D002901 4.7e-07 58.2 37 75.7
vmacro08407 Vaccinium macrocarpon HOM05D002720 ORTHO05D002901 4.7e-07 58.2 37 78.4
Atru.chr4.2236 Acer truncatum HOM05D002720 ORTHO05D002901 8.0e-07 57.4 37 75.7
Thecc.10G145600 Theobroma cacao HOM05D002720 ORTHO05D002901 1.4e-06 56.6 37 75.7
Cpa.g.sc2.369 Carica papaya HOM05D002720 ORTHO05D002901 1.8e-06 56.2 37 73.0
CSS0035657 Camellia sinensis var. sinensis HOM05D002720 ORTHO05D002901 2.3e-06 55.8 37 70.3
CSS0039978 Camellia sinensis var. sinensis HOM05D002720 ORTHO05D002901 2.3e-06 55.8 37 70.3
Duzib114G0436 Durio zibethinus HOM05D002720 ORTHO05D002901 2.3e-06 55.8 37 73.0
Duzib114G1034 Durio zibethinus HOM05D002720 ORTHO05D002901 2.3e-06 55.8 37 73.0
GSVIVG01018108001 Vitis vinifera HOM05D002720 ORTHO05D002901 3.0e-06 55.5 37 70.3
CiPaw.12G002900 Carya illinoinensis HOM05D002720 ORTHO05D002901 4.0e-06 55.1 36 69.4
Gohir.A05G283100 Gossypium hirsutum HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 73.0
Gohir.D05G284100 Gossypium hirsutum HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 73.0
Gorai.009G298700 Gossypium raimondii HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 73.0
Potri.008G161700 Populus trichocarpa HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 67.6
Potri.010G077300 Populus trichocarpa HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 67.6
Solyc03g118380.3 Solanum lycopersicum HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 64.9
Sopen03g037280 Solanum pennellii HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 64.9
PGSC0003DMG400008310 Solanum tuberosum HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 64.9
PGSC0003DMG400014251 Solanum tuberosum HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 64.9
Thecc.10G145800 Theobroma cacao HOM05D002720 ORTHO05D002901 4.0e-06 55.1 37 73.0
QL09p012554 Quercus lobata HOM05D002720 ORTHO05D002901 5.2e-06 54.7 37 67.6
Thecc.10G146200 Theobroma cacao HOM05D002720 ORTHO05D002901 5.2e-06 54.7 37 73.0
Lalb_Chr06g0169331 Lupinus albus HOM05D002720 ORTHO05D002901 6.7e-06 54.3 37 70.3
Manes.07G037400 Manihot esculenta HOM05D002720 ORTHO05D002901 6.7e-06 54.3 37 67.6
Nitab4.5_0000695g0070 Nicotiana tabacum HOM05D002720 ORTHO05D002901 8.8e-06 53.9 37 62.2
Nitab4.5_0006814g0010 Nicotiana tabacum HOM05D002720 ORTHO05D002901 8.8e-06 53.9 37 62.2


User provided reference genes

Program Settings