Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 2.7e-216 755.0 367 100.0
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 8.8e-199 696.8 365 91.2
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.2e-194 682.2 365 89.3
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.1e-193 679.9 359 89.7
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.2e-192 676.4 361 88.9
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 2.7e-192 675.2 365 88.2
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 5.2e-191 671.0 365 87.7
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 4.4e-190 667.9 360 87.8
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 5.7e-190 667.5 360 87.8
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 4.8e-189 664.5 368 87.8
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.8e-188 662.5 357 86.8
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 2.4e-188 662.1 360 86.9
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 7.0e-188 660.6 361 86.1
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 9.1e-188 660.2 365 85.5
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 9.1e-188 660.2 361 85.6
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.2e-187 659.8 359 86.4
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 1.6e-187 659.4 363 84.6
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 2.7e-187 658.7 360 85.8
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 3.5e-187 658.3 359 86.4
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 4.5e-187 657.9 360 86.9
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 5.9e-187 657.5 360 85.8
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 7.7e-187 657.1 367 83.9
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 1.0e-186 656.8 362 85.6
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 1.3e-186 656.4 386 83.9
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 3.8e-186 654.8 358 86.3
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 3.8e-186 654.8 356 86.8
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 6.5e-186 654.1 358 84.6
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 1.1e-185 653.3 359 85.2
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 1.1e-185 653.3 358 86.0
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.9e-185 652.5 362 83.4
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 1.9e-185 652.5 359 86.1
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.5e-185 652.1 362 83.7
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 4.2e-185 651.4 358 86.0
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 1.2e-184 649.8 359 85.8
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 1.2e-184 649.8 359 85.8
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 1.2e-184 649.8 367 83.9
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.6e-184 649.4 372 83.1
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 2.1e-184 649.0 362 84.3
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 8.0e-184 647.1 358 85.2
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.0e-183 646.7 356 85.1
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 6.8e-183 644.0 374 80.7
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 8.8e-183 643.7 360 84.7
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 8.8e-183 643.7 360 84.7
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 1.2e-182 643.3 374 82.9
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 1.5e-182 642.9 368 82.6
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 1.5e-182 642.9 367 82.8
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.5e-182 642.9 359 83.8
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 3.4e-182 641.7 361 83.7
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 3.4e-182 641.7 358 83.5
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 4.4e-182 641.3 368 82.3
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 4.4e-182 641.3 368 83.2
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 4.4e-182 641.3 362 82.9
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 4.4e-182 641.3 355 84.8
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 7.5e-182 640.6 359 82.7
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 7.5e-182 640.6 374 80.5
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 9.8e-182 640.2 361 83.7
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 1.3e-181 639.8 360 83.9
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.7e-181 639.4 364 83.0
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 2.2e-181 639.0 367 83.1
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 4.9e-181 637.9 360 82.8
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 1.1e-180 636.7 367 81.7
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 1.8e-180 636.0 358 82.4
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 1.8e-180 636.0 358 83.2
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 3.1e-180 635.2 357 83.2
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 4.1e-180 634.8 374 80.5
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 5.4e-180 634.4 363 81.3
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 5.4e-180 634.4 361 83.7
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 7.0e-180 634.0 362 82.3
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 9.2e-180 633.6 360 81.9
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 1.2e-179 633.3 369 81.8
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 1.2e-179 633.3 381 80.1
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.2e-179 633.3 362 82.3
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 1.6e-179 632.9 388 78.9
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 2.7e-179 632.1 357 82.4
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 5.9e-179 630.9 354 83.9
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 5.0e-178 627.9 367 80.4
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 1.5e-177 626.3 360 82.5
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 4.3e-177 624.8 363 81.3
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 5.6e-177 624.4 362 81.5
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 7.3e-177 624.0 361 81.4
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 9.5e-177 623.6 361 79.8
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.2e-176 623.2 377 79.0
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 8.0e-176 620.5 366 80.6
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 8.0e-176 620.5 366 79.8
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 8.0e-176 620.5 363 80.7
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 8.0e-176 620.5 366 79.8
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 1.4e-175 619.8 358 83.8
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.4e-175 619.8 385 76.9
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.4e-175 619.8 366 79.8
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 3.0e-175 618.6 363 79.1
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 6.8e-175 617.5 368 80.7
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 8.9e-175 617.1 357 79.6
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 8.9e-175 617.1 355 82.3
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 4.4e-174 614.8 360 80.8
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.3e-173 613.2 349 82.5
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 2.4e-172 609.0 373 79.4
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.4e-172 609.0 359 79.9
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 5.4e-172 607.8 375 77.3
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 9.2e-172 607.1 377 75.3
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 2.3e-170 602.4 359 79.7
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.2e-168 596.7 358 79.6
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 1.0e-167 593.6 362 77.1
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 4.0e-167 591.7 377 75.6
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 5.2e-167 591.3 356 77.5
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 3.4e-166 588.6 366 79.5
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.4e-166 588.2 371 75.7
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 5.8e-166 587.8 348 79.3
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 1.9e-164 582.8 365 77.5
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.6e-163 578.2 355 76.3
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.9e-162 575.1 351 75.8
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 5.6e-161 571.2 431 67.7
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 7.3e-161 570.9 358 76.3
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 7.3e-161 570.9 354 76.0
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 8.1e-160 567.4 355 74.9
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.3e-157 560.1 362 74.9
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 4.6e-155 551.6 356 72.2
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 7.8e-155 550.8 353 72.8
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 5.1e-154 548.1 363 72.7
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 5.1e-154 548.1 362 73.5
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 8.6e-154 547.4 331 75.2
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 1.5e-153 546.6 371 70.6
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 1.9e-153 546.2 301 85.7
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.7e-152 541.6 363 71.6
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.1e-151 540.4 359 73.5
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 5.8e-150 534.6 349 69.9
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 7.1e-148 527.7 279 88.5
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.5e-147 525.4 365 71.0
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.2e-142 510.4 362 66.3
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.1e-140 503.8 291 81.1
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 2.3e-138 496.1 247 94.7
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.1e-137 493.8 354 65.3
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 1.2e-134 483.8 344 66.3
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 8.4e-133 477.6 717 40.9
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 3.2e-132 475.7 356 66.3
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 4.9e-125 451.8 310 67.1
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.2e-123 447.2 351 57.5
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 7.6e-118 427.9 267 76.4
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.0e-114 417.5 239 80.8
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 4.3e-113 412.1 365 54.8
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.9e-105 386.7 334 59.9
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 3.4e-102 375.9 216 80.6
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 8.5e-101 371.3 347 55.9
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 1.3e-96 357.5 251 64.9
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 1.7e-85 320.5 202 75.7
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.7e-83 313.2 291 57.7
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 6.0e-54 215.7 138 75.4
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 1.4e-47 194.5 132 75.0
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 2.4e-47 193.7 132 75.8
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 2.4e-47 193.7 132 75.0
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 9.2e-47 191.8 100 91.0
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 9.2e-47 191.8 126 77.8
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 3.5e-46 189.9 114 79.8
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.7e-45 187.6 103 88.3
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 6.6e-45 185.7 171 53.8
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 1.5e-44 184.5 131 71.8
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 4.1e-39 166.4 126 66.7
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.1e-38 164.1 98 76.5
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 6.8e-34 149.1 111 66.7
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 4.9e-32 142.9 132 56.8
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 2.0e-25 120.9 78 75.6
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 3.4e-25 120.2 69 82.6
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.2e-22 111.7 68 77.9
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 2.1e-22 110.9 68 79.4
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 3.3e-20 103.6 98 56.1
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 9.6e-20 102.1 61 80.3
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 9.9e-17 92.0 84 57.1
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.2e-16 90.9 127 46.5
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 2.3e-13 80.9 62 62.9
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.5e-12 77.4 46 71.7
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 1.9e-07 61.2 41 68.3
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 2.7e-06 57.4 31 83.9


User provided reference genes

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