Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 0.0e+00 1300.0 649 100.0
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 7.3e-257 890.6 618 71.7
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 1.3e-242 843.2 616 70.0
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 9.0e-239 830.5 610 69.2
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 3.4e-238 828.6 631 67.2
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 7.6e-238 827.4 618 67.3
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 1.0e-237 827.0 615 68.9
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 1.0e-234 817.0 617 68.1
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 4.3e-233 811.6 616 68.0
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 8.5e-229 797.3 616 67.2
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 9.7e-225 783.9 615 65.4
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 2.8e-224 782.3 608 65.1
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 6.5e-221 771.2 616 64.1
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.3e-216 756.9 615 63.3
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 1.4e-215 753.4 618 62.5
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 7.0e-215 751.1 517 71.6
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 7.0e-215 751.1 616 63.0
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 5.9e-214 748.0 614 61.2
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.6e-211 740.0 614 61.4
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 1.0e-210 737.3 617 62.1
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.6e-209 732.6 616 60.2
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 1.3e-208 730.3 626 62.0
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.3e-208 730.3 617 61.1
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 2.2e-208 729.6 614 60.6
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 2.2e-208 729.6 615 61.3
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 8.2e-208 727.6 616 60.9
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.1e-207 727.2 617 60.9
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 2.4e-207 726.1 615 59.7
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 2.4e-207 726.1 616 61.5
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.1e-207 725.3 618 60.7
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 7.0e-207 724.5 617 61.3
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.2e-206 723.8 616 60.6
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 1.6e-206 723.4 617 60.9
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.6e-206 723.4 616 59.9
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 2.6e-206 722.6 616 60.2
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 5.9e-206 721.5 619 59.9
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 5.9e-206 721.5 613 60.5
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 1.7e-205 719.9 617 59.0
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 4.2e-204 715.3 617 60.0
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 6.1e-203 711.4 617 59.5
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 8.8e-202 707.6 620 60.2
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.5e-201 706.8 617 59.3
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.4e-201 705.7 619 59.3
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 4.4e-201 705.3 616 58.8
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 2.8e-200 702.6 616 58.9
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 4.8e-200 701.8 616 60.1
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 6.3e-200 701.4 616 60.2
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 1.8e-199 699.9 612 59.3
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 1.3e-197 693.7 616 58.9
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 3.8e-197 692.2 598 62.7
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 3.8e-197 692.2 614 58.6
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.5e-196 690.3 614 60.1
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 2.7e-195 686.0 595 58.3
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.0e-194 684.1 608 61.0
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 9.1e-191 671.0 620 57.4
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 2.0e-190 669.8 614 57.5
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 4.5e-190 668.7 637 57.3
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.1e-188 664.1 608 59.7
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.4e-186 657.1 629 56.0
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 9.8e-185 651.0 618 57.8
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.2e-184 649.8 629 56.8
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.3e-181 640.6 615 55.6
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.0e-181 638.6 621 55.9
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 8.0e-179 631.3 615 54.5
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 8.9e-178 627.9 530 60.9
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 2.0e-177 626.7 615 55.6
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 9.8e-177 624.4 615 55.3
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 4.9e-176 622.1 628 54.6
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 6.4e-176 621.7 619 54.1
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.1e-175 620.9 615 54.3
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.6e-174 617.1 629 54.5
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 7.8e-174 614.8 616 54.2
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.7e-173 613.6 615 53.3
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 2.3e-173 613.2 615 53.3
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 2.5e-172 609.8 617 53.0
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 7.3e-172 608.2 652 50.3
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 4.7e-171 605.5 619 52.7
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 2.9e-168 596.3 638 51.9
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 7.1e-167 591.7 492 60.4
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 2.7e-166 589.7 453 63.1
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 7.3e-164 581.6 504 60.1
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.4e-162 577.4 612 51.8
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 9.9e-161 571.2 379 74.9
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.1e-159 567.8 638 48.7
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 1.9e-159 567.0 527 56.2
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 1.0e-157 561.2 396 70.7
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 1.1e-156 557.8 631 49.3
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 1.9e-156 557.0 591 53.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 6.2e-155 552.0 624 48.9
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.1e-148 531.2 379 68.6
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 4.9e-136 489.2 405 66.4
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 2.4e-135 486.9 303 79.2
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 2.5e-119 433.7 301 72.4
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 8.5e-112 408.7 587 41.2
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 2.2e-107 394.0 264 72.7
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 7.9e-102 375.6 374 52.1
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.6e-100 370.5 300 62.3
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 3.7e-99 366.7 375 52.0
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 3.8e-96 356.7 315 62.2
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 2.5e-95 354.0 634 36.8
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 2.1e-94 350.9 242 70.2
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 3.1e-90 337.0 242 68.2
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.5e-87 328.2 611 36.2
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 3.4e-84 317.0 328 51.8
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 2.8e-83 313.9 675 33.5
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.5e-79 301.6 397 45.8
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 3.1e-74 283.9 556 33.6
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.4e-66 258.5 613 31.8
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 4.3e-55 220.3 330 42.1
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.3e-55 220.3 254 46.9
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 1.8e-45 188.3 211 49.8
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 4.9e-35 153.7 114 59.6
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.4e-34 150.2 185 45.9
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 7.8e-33 146.4 237 38.4
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 1.6e-30 138.7 88 75.0
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 4.8e-30 137.1 144 43.8
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 6.4e-27 126.7 170 44.1
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 3.5e-25 120.9 88 62.5
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 3.3e-23 114.4 129 48.8
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 1.3e-22 112.5 93 59.1
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 7.6e-20 103.2 117 47.9
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.9e-18 98.6 54 83.3
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 5.1e-16 90.5 171 31.6
Medtr6g087540 Medicago truncatula HOM05D006226 ORTHO05D007738 1.3e-11 75.9 148 35.8
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 5.5e-10 70.5 122 35.2
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 6.7e-08 63.5 165 27.3
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.1e-07 62.8 60 50.0
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 9.7e-07 59.7 211 24.6


User provided reference genes

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