Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 1.5e-236 822.4 396 100.0
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 9.6e-167 590.5 373 74.5
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 1.7e-163 579.7 373 73.7
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 5.4e-162 574.7 377 72.9
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 4.3e-159 565.1 376 71.3
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.1e-157 560.5 377 71.1
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 7.6e-156 554.3 373 69.7
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 7.1e-154 547.7 378 69.8
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 9.3e-154 547.4 374 67.9
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 1.0e-152 543.9 374 69.0
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 3.0e-152 542.3 373 70.2
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 1.9e-151 539.7 377 68.4
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 9.6e-151 537.3 383 67.6
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 9.6e-151 537.3 370 72.2
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 2.1e-150 536.2 376 68.4
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 3.7e-150 535.4 377 67.6
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 1.1e-149 533.9 386 66.3
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 2.5e-146 522.7 378 65.9
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 9.3e-146 520.8 373 65.7
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 1.6e-145 520.0 377 66.8
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 3.5e-145 518.8 401 63.6
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 1.0e-144 517.3 377 68.2
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.0e-144 517.3 377 66.6
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 1.8e-144 516.5 381 67.7
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 8.7e-144 514.2 376 66.0
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 8.7e-144 514.2 376 66.2
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 1.3e-142 510.4 371 65.8
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.8e-142 509.2 385 63.1
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 3.7e-142 508.8 376 62.8
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 3.7e-142 508.8 377 65.8
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.1e-141 507.3 377 65.5
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 1.8e-141 506.5 377 65.8
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 2.4e-141 506.1 379 64.4
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 4.1e-141 505.4 376 63.8
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 5.3e-141 505.0 377 65.5
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 3.4e-140 502.3 368 65.2
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 5.9e-140 501.5 444 58.3
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 2.9e-139 499.2 369 66.4
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 7.2e-138 494.6 376 64.6
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 2.1e-137 493.0 376 60.9
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 3.6e-137 492.3 368 64.7
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 5.7e-135 485.0 405 61.5
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 9.7e-135 484.2 431 56.4
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 2.2e-134 483.0 376 62.2
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 5.3e-133 478.4 378 63.8
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 3.9e-128 462.2 370 61.4
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 4.4e-127 458.8 402 57.2
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 8.2e-126 454.5 381 60.4
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 1.8e-125 453.4 375 61.1
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 5.9e-124 448.4 369 60.7
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 7.2e-122 441.4 297 70.4
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 2.1e-121 439.9 445 53.5
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 2.7e-121 439.5 305 73.1
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 6.1e-121 438.3 376 59.3
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 3.9e-120 435.6 370 56.8
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 2.0e-119 433.3 423 54.8
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 2.6e-116 422.9 369 55.8
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 5.9e-116 421.8 382 56.8
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 5.9e-116 421.8 397 55.4
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.7e-115 420.2 293 72.4
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 4.7e-113 412.1 376 54.8
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 3.0e-112 409.5 388 51.3
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 1.2e-111 407.5 375 53.9
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 1.5e-111 407.1 387 51.4
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 5.7e-111 405.2 364 56.9
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 7.5e-111 404.8 389 51.4
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.7e-110 403.7 291 66.3
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 4.8e-110 402.1 388 50.3
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 5.3e-109 398.7 288 66.3
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 1.6e-108 397.1 369 52.6
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.5e-108 396.0 404 53.2
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 5.9e-108 395.2 387 49.4
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 7.7e-108 394.8 420 52.4
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 1.3e-107 394.0 389 49.6
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 1.7e-107 393.7 386 49.2
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 2.2e-107 393.3 289 64.7
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 8.5e-107 391.3 384 49.7
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 1.6e-105 387.1 282 66.0
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 3.6e-105 386.0 428 46.7
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 2.6e-103 379.8 385 48.6
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 4.4e-103 379.0 322 59.6
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 3.7e-102 375.9 436 46.1
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 3.7e-102 375.9 372 51.6
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 4.5e-100 369.0 303 62.4
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 4.2e-98 362.5 375 50.1
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 7.2e-98 361.7 374 50.8
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 1.2e-95 354.4 377 47.5
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 2.4e-93 346.7 367 51.5
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 4.1e-93 345.9 382 47.9
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 8.6e-91 338.2 239 66.9
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 1.0e-88 331.3 329 52.6
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 1.5e-87 327.4 373 46.1
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.1e-81 307.0 187 77.5
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 8.0e-81 305.1 370 42.7
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 6.4e-78 295.4 221 66.1
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 3.2e-77 293.1 191 73.3
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.3e-72 276.9 159 83.0
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 2.0e-71 273.9 383 36.8
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 1.0e-67 261.5 161 72.7
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 3.1e-64 250.0 226 58.4
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 8.4e-62 241.9 184 65.2
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 9.2e-61 238.4 179 61.5
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 1.0e-59 235.0 363 36.6
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 2.0e-47 194.1 369 34.4
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 4.5e-47 193.0 114 76.3
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 3.3e-42 176.8 111 75.7
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-34 151.0 308 33.4
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.9e-29 134.4 90 65.6
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 6.1e-28 129.4 141 48.9
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 1.5e-26 124.8 70 75.7
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 4.3e-26 123.2 122 51.6
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 3.7e-17 93.6 53 79.2
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 3.7e-17 93.6 99 47.5
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 1.2e-15 88.6 298 26.8
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 4.1e-08 63.5 53 54.7
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 2.6e-07 60.8 30 80.0
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.7e-06 58.2 31 71.0
QL01p005881 Quercus lobata HOM05D006389 ORTHO05D007863 1.7e-06 58.2 79 44.3


User provided reference genes

Program Settings