Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36116 Davidia involucrata HOM05D003677 ORTHO05D004231 1.6e-68 262.7 140 100.0
Dinv24683 Davidia involucrata HOM05D003677 ORTHO05D004231 3.2e-24 115.5 139 56.1
Hma1.2p1_1512F.1_g287960 Hydrangea macrophylla HOM05D003677 ORTHO05D004231 4.2e-24 115.2 133 60.9
Dinv35470 Davidia involucrata HOM05D003677 ORTHO05D004231 7.9e-23 110.9 141 55.3
Actinidia38938 Actinidia chinensis HOM05D003677 ORTHO05D004231 2.3e-22 109.4 127 57.5
Actinidia34752 Actinidia chinensis HOM05D003677 ORTHO05D004231 8.7e-22 107.5 127 55.9
Lj2A42G39 Lonicera japonica HOM05D003677 ORTHO05D004231 5.6e-21 104.8 139 54.0
EL10Ac4g09010 Beta vulgaris HOM05D003677 ORTHO05D004231 1.4e-19 100.1 117 56.4
Nitab4.5_0001372g0020 Nicotiana tabacum HOM05D003677 ORTHO05D004231 3.1e-19 99.0 118 51.7
PGR004G1803 Punica granatum HOM05D003677 ORTHO05D004231 1.2e-18 97.1 131 51.9
Hund22161 Selenicereus undatus HOM05D003677 ORTHO05D004231 2.0e-18 96.3 118 55.1
Sabra13G0042900 Salix brachista HOM05D003677 ORTHO05D004231 2.6e-18 95.9 118 52.5
Gohir.A11G247500 Gossypium hirsutum HOM05D003677 ORTHO05D004231 5.8e-18 94.7 129 54.3
Nn1g02804 Nelumbo nucifera HOM05D003677 ORTHO05D004231 5.8e-18 94.7 143 46.9
Gohir.D11G257800 Gossypium hirsutum HOM05D003677 ORTHO05D004231 7.6e-18 94.4 129 54.3
Gorai.007G276100 Gossypium raimondii HOM05D003677 ORTHO05D004231 7.6e-18 94.4 129 54.3
Potri.019G018900 Populus trichocarpa HOM05D003677 ORTHO05D004231 1.0e-17 94.0 120 51.7
Sc20g0000650 Simmondsia chinensis HOM05D003677 ORTHO05D004231 1.0e-17 94.0 135 48.9
Potri.013G046900 Populus trichocarpa HOM05D003677 ORTHO05D004231 1.3e-17 93.6 120 50.8
TAR633G1327 Trochodendron aralioides HOM05D003677 ORTHO05D004231 1.3e-17 93.6 137 48.9
CsaV3_2G009740 Cucumis sativus L. HOM05D003677 ORTHO05D004231 1.7e-17 93.2 131 51.9
Nitab4.5_0003780g0080 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.2e-17 92.8 126 50.0
Rhsim09G0137200 Rhododendron simsii HOM05D003677 ORTHO05D004231 2.9e-17 92.4 139 48.9
Sopen04g005150 Solanum pennellii HOM05D003677 ORTHO05D004231 4.9e-17 91.7 126 48.4
Thecc.05G271100 Theobroma cacao HOM05D003677 ORTHO05D004231 4.9e-17 91.7 131 53.4
CANSAT54G2642 Cannabis sativa HOM05D003677 ORTHO05D004231 6.5e-17 91.3 111 53.2
Cc02_g08860 Coffea canephora HOM05D003677 ORTHO05D004231 6.5e-17 91.3 110 52.7
vmacro10364 Vaccinium macrocarpon HOM05D003677 ORTHO05D004231 8.4e-17 90.9 153 46.4
FAN09G1189 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.1e-16 90.5 120 57.5
Solyc04g010000.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 1.1e-16 90.5 125 48.0
COL.COLO4_15475 Corchorus olitorius HOM05D003677 ORTHO05D004231 1.4e-16 90.1 131 52.7
ClCG11G010570 Citrullus lanatus HOM05D003677 ORTHO05D004231 2.5e-16 89.4 131 50.4
Sopen04g005130 Solanum pennellii HOM05D003677 ORTHO05D004231 2.5e-16 89.4 126 47.6
CSS0027708 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 3.2e-16 89.0 137 49.6
CSS0028631 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 3.2e-16 89.0 137 49.6
Duzib106G0879 Durio zibethinus HOM05D003677 ORTHO05D004231 4.2e-16 88.6 129 52.7
Sed0020318 Sechium edule HOM05D003677 ORTHO05D004231 4.2e-16 88.6 134 49.3
Gohir.A13G167400 Gossypium hirsutum HOM05D003677 ORTHO05D004231 5.5e-16 88.2 129 53.5
Manes.09G148000 Manihot esculenta HOM05D003677 ORTHO05D004231 5.5e-16 88.2 119 52.9
Peaxi162Scf00528g00119 Petunia axillaris HOM05D003677 ORTHO05D004231 5.5e-16 88.2 124 46.0
TWI81G0231 Tripterygium wilfordii HOM05D003677 ORTHO05D004231 5.5e-16 88.2 127 50.4
FAN05G3813 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.2e-15 87.0 126 56.3
AUR62004836 Chenopodium quinoa HOM05D003677 ORTHO05D004231 2.7e-15 85.9 124 51.6
Nn3g19689 Nelumbo nucifera HOM05D003677 ORTHO05D004231 6.0e-15 84.7 130 46.9
Oeu002000.1 Olea europaea HOM05D003677 ORTHO05D004231 6.0e-15 84.7 130 50.8
Hund06908 Selenicereus undatus HOM05D003677 ORTHO05D004231 6.0e-15 84.7 132 48.5
Cc11_g04280 Coffea canephora HOM05D003677 ORTHO05D004231 7.9e-15 84.3 126 47.6
Gorai.013G187700 Gossypium raimondii HOM05D003677 ORTHO05D004231 7.9e-15 84.3 129 51.9
Nitab4.5_0000687g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.3e-14 83.6 113 50.4
Nitab4.5_0000718g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.3e-14 83.6 108 49.1
Sopen04g005170 Solanum pennellii HOM05D003677 ORTHO05D004231 1.3e-14 83.6 114 45.6
Migut.F01271 Erythranthe guttata HOM05D003677 ORTHO05D004231 1.8e-14 83.2 130 48.5
FAN02G0354 Fragaria x ananassa HOM05D000329 ORTHO05D000833 1.8e-14 83.2 125 53.6
RcHm_v2.0_Chr3g0449621 Rosa chinensis HOM05D003677 ORTHO05D004231 1.8e-14 83.2 127 52.8
SGA_v2.0_scaffold28G12049 Striga asiatica HOM05D003677 ORTHO05D004231 3.0e-14 82.4 120 48.3
Oeu039587.1 Olea europaea HOM05D003677 ORTHO05D004231 3.9e-14 82.0 118 50.0
Cpa.g.c35686 Carica papaya HOM05D003677 ORTHO05D004231 5.1e-14 81.6 132 46.2
Nitab4.5_0002915g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 5.1e-14 81.6 109 48.6
Lsat_1_v5_gn_1_9200 Lactuca sativa HOM05D003677 ORTHO05D004231 6.7e-14 81.3 132 47.7
Cfa006347 Carpinus fangiana HOM05D003677 ORTHO05D004231 1.5e-13 80.1 127 47.2
Haze_04435 Corylus avellana HOM05D003677 ORTHO05D004231 1.5e-13 80.1 127 47.2
TAR362G0866 Trochodendron aralioides HOM05D003677 ORTHO05D004231 1.5e-13 80.1 142 43.0
Atru.chr4.2875 Acer truncatum HOM05D003677 ORTHO05D004231 1.9e-13 79.7 124 47.6
Phvul.008G151836 Phaseolus vulgaris HOM05D003677 ORTHO05D004231 1.9e-13 79.7 131 48.1
VMungo0720G1875 Vigna mungo HOM05D003677 ORTHO05D004231 2.5e-13 79.3 131 48.1
Ciclev10021882m.g Citrus clementina HOM05D003677 ORTHO05D004231 3.3e-13 79.0 124 46.0
Medtr1g080150 Medicago truncatula HOM05D003677 ORTHO05D004231 4.3e-13 78.6 116 46.6
MD04G1229900 Malus domestica HOM05D003677 ORTHO05D004231 5.7e-13 78.2 118 51.7
Aqoxy5G00213 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 7.4e-13 77.8 129 44.2
Glyma.20G223000 Glycine max HOM05D003677 ORTHO05D004231 7.4e-13 77.8 134 47.8
MD12G1247000 Malus domestica HOM05D003677 ORTHO05D004231 7.4e-13 77.8 117 51.3
MD12G1247300 Malus domestica HOM05D003677 ORTHO05D004231 7.4e-13 77.8 117 51.3
Atru.chr2.953 Acer truncatum HOM05D003677 ORTHO05D004231 1.3e-12 77.0 99 51.5
CiPaw.02G020400 Carya illinoinensis HOM05D003677 ORTHO05D004231 1.6e-12 76.6 119 47.1
PGSC0003DMG400023407 Solanum tuberosum HOM05D003677 ORTHO05D004231 1.6e-12 76.6 111 45.0
Duzib128G0961 Durio zibethinus HOM05D003677 ORTHO05D004231 2.8e-12 75.9 107 47.7
MSTRG.24694 Avicennia marina HOM05D003677 ORTHO05D004231 3.7e-12 75.5 127 48.0
Glyma.10G166200 Glycine max HOM05D003677 ORTHO05D004231 4.8e-12 75.1 134 47.0
PSO832G1483 Papaver somniferum HOM05D003677 ORTHO05D004231 4.8e-12 75.1 132 41.7
Solyc04g010040.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 4.8e-12 75.1 121 42.1
Nitab4.5_0010738g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 6.3e-12 74.7 126 43.7
Psat6g142680 Pisum sativum HOM05D003677 ORTHO05D004231 6.3e-12 74.7 126 44.4
TPR.G9915 Trifolium pratense HOM05D003677 ORTHO05D004231 8.2e-12 74.3 117 46.2
CDE04G2392 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 1.1e-11 73.9 145 41.4
THA.LOC104827474 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 1.1e-11 73.9 127 44.1
Atru.chr2.976 Acer truncatum HOM05D003677 ORTHO05D004231 1.4e-11 73.6 128 44.5
Lsat_1_v5_gn_2_16040 Lactuca sativa HOM05D003677 ORTHO05D004231 1.4e-11 73.6 136 43.4
arahy.Tifrunner.gnm1.ann1.U10W7S Arachis hypogaea HOM05D003677 ORTHO05D004231 1.8e-11 73.2 118 45.8
arahy.Tifrunner.gnm1.ann1.5GL5JK Arachis hypogaea HOM05D003677 ORTHO05D004231 2.4e-11 72.8 118 45.8
Ca_10015_v3 Cicer arietinum L. HOM05D003677 ORTHO05D004231 2.4e-11 72.8 115 43.5
Eucgr.H04231 Eucalyptus grandis HOM05D003677 ORTHO05D004231 3.1e-11 72.4 147 42.2
MBI07_g16912_MAGBIO Magnolia biondii HOM05D003677 ORTHO05D004231 3.1e-11 72.4 133 40.6
PSO210G7560 Papaver somniferum HOM05D003677 ORTHO05D004231 3.1e-11 72.4 135 40.0
THA.LOC104802833 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 3.1e-11 72.4 100 45.0
Lj5g0022615 Lotus japonicus HOM05D003677 ORTHO05D004231 5.3e-11 71.6 109 45.9
DCAR_009653 Daucus carota HOM05D003677 ORTHO05D004231 2.6e-10 69.3 115 45.2
THA.LOC104805782 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 2.6e-10 69.3 126 42.1
MSTRG.24142 Avicennia marina HOM05D003677 ORTHO05D004231 4.5e-10 68.6 131 44.3
CDE07G1504 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 7.6e-10 67.8 75 56.0
Sopen05g033470 Solanum pennellii HOM05D003677 ORTHO05D004231 7.6e-10 67.8 109 45.0
SEGI_18661 Sequoiadendron giganteum HOM05D003677 ORTHO05D004231 1.0e-09 67.4 175 36.6
ATR0736G218 Amborella trichopoda HOM05D003677 ORTHO05D004231 1.7e-09 66.6 75 56.0
Peaxi162Scf00015g00308 Petunia axillaris HOM05D003677 ORTHO05D004231 5.0e-09 65.1 102 47.1
Peaxi162Scf00152g00828 Petunia axillaris HOM05D003677 ORTHO05D004231 6.5e-09 64.7 126 38.9
Os02g0622500 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 8.5e-09 64.3 107 43.9
TPR.G22331 Trifolium pratense HOM05D003677 ORTHO05D004231 8.5e-09 64.3 103 41.7
Zm00001eb185100 Zea mays HOM05D003677 ORTHO05D004231 1.1e-08 63.9 91 45.1
BcaC05g30193 Brassica carinata HOM05D003677 ORTHO05D004231 1.9e-08 63.2 107 46.7
Glyma.11G011000 Glycine max HOM05D003677 ORTHO05D004231 2.5e-08 62.8 130 43.1
HanXRQChr13g0397681 Helianthus annuus HOM05D003677 ORTHO05D004231 2.5e-08 62.8 97 48.5
GSVIVG01016104001 Vitis vinifera HOM05D003677 ORTHO05D004231 2.5e-08 62.8 91 48.4
BcaC05g29937 Brassica carinata HOM05D003677 ORTHO05D004231 3.2e-08 62.4 127 42.5
C05p62750 Brassica napus HOM05D003677 ORTHO05D004231 3.2e-08 62.4 127 42.5
BolC5t34928H Brassica oleracea HOM05D003677 ORTHO05D004231 3.2e-08 62.4 127 42.5
GSVIVG01023509001 Vitis vinifera HOM05D003677 ORTHO05D004231 3.2e-08 62.4 57 63.2
Sp3g03350 Schrenkiella parvula HOM05D003677 ORTHO05D004231 4.2e-08 62.0 127 39.4
ECA238G1929 Erigeron canadensis HOM05D003677 ORTHO05D004231 5.5e-08 61.6 93 46.2
FvH4_6g01880 Fragaria vesca HOM05D003677 ORTHO05D004231 5.5e-08 61.6 124 45.2
FAN14G1798 Fragaria x ananassa HOM05D003677 ORTHO05D004231 5.5e-08 61.6 124 45.2
FAN14G5891 Fragaria x ananassa HOM05D003677 ORTHO05D004231 5.5e-08 61.6 124 45.2
Solyc05g055010.4 Solanum lycopersicum HOM05D003677 ORTHO05D004231 5.5e-08 61.6 109 42.2
Migut.I00390 Erythranthe guttata HOM05D003677 ORTHO05D004231 7.2e-08 61.2 107 43.0
AT3G04500 Arabidopsis thaliana HOM05D003677 ORTHO05D004231 9.3e-08 60.8 132 42.4
CAN.G1465.9 Capsicum annuum HOM05D003677 ORTHO05D004231 9.3e-08 60.8 104 42.3
Lalb_Chr02g0149101 Lupinus albus HOM05D003677 ORTHO05D004231 1.2e-07 60.5 117 41.0
Aa31LG5G14940 Aethionema arabicum HOM05D003677 ORTHO05D004231 2.7e-07 59.3 88 44.3
AL3G14510 Arabidopsis lyrata HOM05D003677 ORTHO05D004231 2.7e-07 59.3 132 40.2
ClCG06G009560 Citrullus lanatus HOM05D003677 ORTHO05D004231 2.7e-07 59.3 105 42.9
Gohir.D13G172900 Gossypium hirsutum HOM05D003677 ORTHO05D004231 3.6e-07 58.9 70 52.9
PSO210G2652 Papaver somniferum HOM05D003677 ORTHO05D004231 3.6e-07 58.9 78 50.0
unitig_61.g26069 Utricularia gibba HOM05D003677 ORTHO05D004231 3.6e-07 58.9 114 43.9
Carub.0003s0366 Capsella rubella HOM05D003677 ORTHO05D004231 4.6e-07 58.5 108 39.8
Nitab4.5_0003780g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 4.6e-07 58.5 148 35.1
HPP92_002516 Vanilla planifolia HOM05D003677 ORTHO05D004231 4.6e-07 58.5 68 54.4
HPP92_002535 Vanilla planifolia HOM05D003677 ORTHO05D004231 4.6e-07 58.5 68 54.4
PSO210G0146 Papaver somniferum HOM05D003677 ORTHO05D004231 7.9e-07 57.8 78 48.7
Prupe.6G350000 Prunus persica HOM05D003677 ORTHO05D004231 1.0e-06 57.4 58 62.1
FAN05G1443 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.3e-06 57.0 127 43.3
HanXRQChr04g0108621 Helianthus annuus HOM05D003677 ORTHO05D004231 1.3e-06 57.0 73 53.4
Pp3c23_14650 Physcomitrium patens HOM05D003677 ORTHO05D004231 3.0e-06 55.8 127 37.8
Zm00001eb108490 Zea mays HOM05D003677 ORTHO05D004231 5.1e-06 55.1 70 54.3
Lalb_Chr16g0386451 Lupinus albus HOM05D003677 ORTHO05D004231 6.7e-06 54.7 86 45.3
Mapoly0213s0004 Marchantia polymorpha HOM05D003677 ORTHO05D004231 6.7e-06 54.7 77 44.2


User provided reference genes

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