Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36053 Davidia involucrata HOM05D000625 ORTHO05D000467 2.2e-202 708.8 361 100.0
Dinv39395 Davidia involucrata HOM05D000625 ORTHO05D000467 4.2e-76 289.3 461 46.6
GSVIVG01009663001 Vitis vinifera HOM05D000625 ORTHO05D000467 2.1e-67 260.4 474 41.1
vmacro21623 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 3.7e-64 249.6 458 42.4
Rhsim06G0035600 Rhododendron simsii HOM05D000625 ORTHO05D000467 2.0e-62 243.8 434 41.7
TAR628G0949 Trochodendron aralioides HOM05D000625 ORTHO05D000467 1.9e-60 237.3 462 38.3
Cpa.g.sc64.62 Carica papaya HOM05D000625 ORTHO05D000467 1.9e-57 227.3 446 38.6
Lj4A43T54 Lonicera japonica HOM05D000625 ORTHO05D000467 2.1e-56 223.8 444 40.8
TAR376G0269 Trochodendron aralioides HOM05D000625 ORTHO05D000467 2.1e-56 223.8 467 36.8
Ciclev10000407m.g Citrus clementina HOM05D000625 ORTHO05D000467 6.5e-53 212.2 445 37.5
Atru.chr13.521_Atru.chr13.522 Acer truncatum HOM05D000625 ORTHO05D000467 1.4e-52 211.1 425 37.6
Atru.chr13.527_Atru.chr13.528 Acer truncatum HOM05D000625 ORTHO05D000467 1.4e-52 211.1 425 37.6
Potri.002G134300 Populus trichocarpa HOM05D000625 ORTHO05D000467 1.4e-52 211.1 450 37.1
CSS0028030 Camellia sinensis var. sinensis HOM05D000808 ORTHO05D000863 1.9e-52 210.7 407 40.3
Haze_17633 Corylus avellana HOM05D000625 ORTHO05D000467 5.1e-50 202.6 216 55.1
Duzib116G0669 Durio zibethinus HOM05D000625 ORTHO05D000467 1.1e-49 201.4 265 49.4
Potri.014G042600 Populus trichocarpa HOM05D000625 ORTHO05D000467 7.4e-49 198.7 438 36.8
CiPaw.15G074300 Carya illinoinensis HOM05D000625 ORTHO05D000467 3.7e-48 196.4 449 36.1
Thecc.08G023300 Theobroma cacao HOM05D000625 ORTHO05D000467 8.2e-48 195.3 259 48.3
Peaxi162Scf00057g00427 Petunia axillaris HOM05D000625 ORTHO05D000467 1.8e-47 194.1 423 37.8
Sed0011324 Sechium edule HOM05D000625 ORTHO05D000467 4.1e-47 193.0 453 36.2
Sabra14G0030900 Salix brachista HOM05D000625 ORTHO05D000467 1.5e-46 191.0 446 36.1
Actinidia15309 Actinidia chinensis HOM05D000625 ORTHO05D000467 2.6e-46 190.3 403 38.2
Cfa018430 Carpinus fangiana HOM05D000625 ORTHO05D000467 1.0e-45 188.3 433 35.3
Nn5g29524 Nelumbo nucifera HOM05D000625 ORTHO05D000467 5.0e-45 186.0 214 53.7
QL01p055674 Quercus lobata HOM05D000625 ORTHO05D000467 1.9e-44 184.1 268 44.8
QL02p007759 Quercus lobata HOM05D000625 ORTHO05D000467 1.9e-44 184.1 268 44.8
MD08G1032500 Malus domestica HOM05D000625 ORTHO05D000467 2.5e-44 183.7 424 35.1
MELO3C003878.2 Cucumis melo HOM05D000625 ORTHO05D000467 3.2e-44 183.3 453 35.5
COL.COLO4_26354 Corchorus olitorius HOM05D000625 ORTHO05D000467 4.2e-44 183.0 262 45.0
Sabra02G0104700 Salix brachista HOM05D000625 ORTHO05D000467 5.5e-44 182.6 446 35.2
Eucgr.F01546 Eucalyptus grandis HOM05D000625 ORTHO05D000467 2.1e-43 180.6 462 33.3
Manes.18G029100 Manihot esculenta HOM05D000625 ORTHO05D000467 1.0e-42 178.3 395 36.2
Actinidia22562 Actinidia chinensis HOM05D000625 ORTHO05D000467 3.0e-42 176.8 453 36.0
MD15G1029200 Malus domestica HOM05D000625 ORTHO05D000467 9.7e-41 171.8 444 34.9
Nitab4.5_0000110g0410 Nicotiana tabacum HOM05D000625 ORTHO05D000467 1.3e-40 171.4 420 37.4
CsaV3_3G044920 Cucumis sativus L. HOM05D000625 ORTHO05D000467 9.1e-39 165.2 459 34.2
Prupe.1G382200 Prunus persica HOM05D000625 ORTHO05D000467 1.2e-38 164.9 261 44.1
Nitab4.5_0003246g0080 Nicotiana tabacum HOM05D000625 ORTHO05D000467 4.5e-38 162.9 419 36.5
CAN.G1126.27 Capsicum annuum HOM05D000625 ORTHO05D000467 7.7e-38 162.2 421 35.4
MBI16_g43107_MAGBIO Magnolia biondii HOM05D000625 ORTHO05D000467 1.0e-37 161.8 211 47.4
Manes.05G162500 Manihot esculenta HOM05D000625 ORTHO05D000467 6.5e-37 159.1 214 51.9
Gohir.D05G199000 Gossypium hirsutum HOM05D000625 ORTHO05D000467 9.4e-36 155.2 396 34.8
Gorai.009G204200 Gossypium raimondii HOM05D000625 ORTHO05D000467 1.2e-35 154.8 396 34.8
RcHm_v2.0_Chr6g0300651 Rosa chinensis HOM05D000625 ORTHO05D000467 2.7e-35 153.7 211 47.9
Cc10_g03210 Coffea canephora HOM05D000625 ORTHO05D000467 1.0e-34 151.8 250 43.6
Oeu016737.2 Olea europaea HOM05D000625 ORTHO05D000467 1.0e-34 151.8 246 45.1
TWI36G1344 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 3.9e-34 149.8 258 44.6
Sopen04g033630 Solanum pennellii HOM05D000625 ORTHO05D000467 1.5e-33 147.9 398 34.2
FAN20G0050 Fragaria x ananassa HOM05D000625 ORTHO05D000467 2.6e-33 147.1 212 47.2
Solyc04g080040.3 Solanum lycopersicum HOM05D000625 ORTHO05D000467 2.6e-33 147.1 398 34.2
Aqoxy5G01685 Aquilegia oxysepala HOM05D000625 ORTHO05D000467 5.7e-33 146.0 264 40.9
FvH4_2g40090 Fragaria vesca HOM05D000625 ORTHO05D000467 5.7e-33 146.0 204 46.6
CiPaw.16G054700 Carya illinoinensis HOM05D000625 ORTHO05D000467 2.8e-32 143.7 255 42.4
FAN27G3485 Fragaria x ananassa HOM05D000625 ORTHO05D000467 1.1e-31 141.7 260 42.3
Gohir.D01G105500 Gossypium hirsutum HOM05D000625 ORTHO05D000467 4.1e-31 139.8 367 36.5
PSO700G0331 Papaver somniferum HOM05D000625 ORTHO05D000467 4.1e-31 139.8 226 44.7
FAN15G2375 Fragaria x ananassa HOM05D000625 ORTHO05D000467 5.3e-31 139.4 212 45.8
Gohir.A01G117000 Gossypium hirsutum HOM05D000625 ORTHO05D000467 9.1e-31 138.7 327 37.0
PSO170G3223 Papaver somniferum HOM05D000625 ORTHO05D000467 9.1e-31 138.7 263 41.4
MSTRG.25152 Avicennia marina HOM05D000625 ORTHO05D000467 2.6e-30 137.1 364 35.7
Gorai.002G129400 Gossypium raimondii HOM05D000625 ORTHO05D000467 2.6e-30 137.1 367 36.2
Sc15g0006820 Simmondsia chinensis HOM05D000625 ORTHO05D000467 3.5e-30 136.7 396 32.8
PGSC0003DMG401027859 Solanum tuberosum HOM05D000625 ORTHO05D000467 1.5e-28 131.3 188 44.1
PGSC0003DMG402027859 Solanum tuberosum HOM05D000625 ORTHO05D000467 1.5e-28 131.3 188 44.1
PGR083G2524 Punica granatum HOM05D000625 ORTHO05D000467 1.6e-27 127.9 209 45.0
DCAR_012748 Daucus carota HOM05D000481 ORTHO05D000467 8.8e-26 122.1 445 29.9
Glyma.06G033700 Glycine max HOM05D000625 ORTHO05D000467 8.8e-26 122.1 427 33.5
Aa31LG4G5300 Aethionema arabicum HOM05D000625 ORTHO05D000467 4.4e-25 119.8 215 40.9
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 9.7e-25 118.6 108 58.3
SGA_v2.0_scaffold48G18064 Striga asiatica HOM05D000625 ORTHO05D000467 8.2e-24 115.5 213 39.9
Glyma.04G033500 Glycine max HOM05D000625 ORTHO05D000467 2.7e-22 110.5 403 33.5
Hund17650 Selenicereus undatus HOM05D000625 ORTHO05D000467 1.0e-21 108.6 191 40.8
SalBow7G4484 Salvia bowleyana HOM05D000625 ORTHO05D000467 6.5e-21 105.9 394 31.0
CANSAT54G1980 Cannabis sativa HOM05D000625 ORTHO05D000467 2.5e-20 104.0 404 30.7
Sp5g30230 Schrenkiella parvula HOM05D000625 ORTHO05D000467 2.5e-20 104.0 353 31.4
Thhalv10018263m.g Eutrema salsugineum HOM05D000625 ORTHO05D000467 4.2e-20 103.2 348 33.0
BolC6t39945H Brassica oleracea HOM05D000625 ORTHO05D000467 5.5e-20 102.8 183 43.7
C06p49110 Brassica napus HOM05D000625 ORTHO05D000467 2.7e-19 100.5 183 43.2
Lj4A783G82 Lonicera japonica HOM05D000625 ORTHO05D000467 3.6e-19 100.1 391 29.9
arahy.Tifrunner.gnm1.ann1.ATF0F7 Arachis hypogaea HOM05D000625 ORTHO05D000467 6.1e-19 99.4 430 32.1
BcaC08g46974 Brassica carinata HOM05D000625 ORTHO05D000467 6.1e-19 99.4 336 31.8
A07p40710 Brassica napus HOM05D000625 ORTHO05D000467 6.1e-19 99.4 183 43.2
BraA07t31615Z Brassica rapa HOM05D000625 ORTHO05D000467 6.1e-19 99.4 183 43.2
TPR.G12405 Trifolium pratense HOM05D000625 ORTHO05D000467 1.0e-18 98.6 446 29.6
arahy.Tifrunner.gnm1.ann1.1U7IT4 Arachis hypogaea HOM05D000625 ORTHO05D000467 1.8e-18 97.8 434 31.6
Medtr3g111700 Medicago truncatula HOM05D000625 ORTHO05D000467 4.0e-18 96.7 264 37.1
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 5.2e-18 96.3 342 31.3
Ah.05g169480 Amaranthus hybridus HOM05D008003 ORTHO05D010079 8.8e-18 95.5 157 45.9
CDE01G0044 Ceratophyllum demersum HOM05D000625 ORTHO05D000467 1.5e-17 94.7 138 46.4
Phvul.009G056700 Phaseolus vulgaris HOM05D000625 ORTHO05D000467 2.6e-17 94.0 245 38.8
Lsat_1_v5_gn_4_121781 Lactuca sativa HOM05D000625 ORTHO05D000467 4.4e-17 93.2 302 34.1
EL10Ac4g08635 Beta vulgaris HOM05D000625 ORTHO05D000467 5.7e-17 92.8 162 42.0
AL2G34990 Arabidopsis lyrata HOM05D000625 ORTHO05D000467 2.8e-16 90.5 171 39.8
THA.LOC104808004 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 3.7e-16 90.1 292 34.6
HPP92_024904 Vanilla planifolia HOM05D000625 ORTHO05D000467 1.1e-15 88.6 148 46.6
CARHR068420 Cardamine hirsuta HOM05D000625 ORTHO05D000467 3.1e-15 87.0 188 40.4
DCAR_019514 Daucus carota HOM05D000625 ORTHO05D000467 3.1e-15 87.0 366 33.9
CDE02G4478 Ceratophyllum demersum HOM05D000625 ORTHO05D000467 4.1e-15 86.7 231 35.9
VMungo1309G2141 Vigna mungo HOM05D000625 ORTHO05D000467 4.1e-15 86.7 396 28.8
Ca_15523_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 7.0e-15 85.9 424 29.7
AT1G75100 Arabidopsis thaliana HOM05D000625 ORTHO05D000467 2.7e-14 84.0 176 39.2
ATR0733G170 Amborella trichopoda HOM05D000625 ORTHO05D000467 7.7e-14 82.4 195 38.5
ECA232G4440 Erigeron canadensis HOM05D002528 ORTHO05D002922 5.0e-13 79.7 193 39.9
BcaB02g06992 Brassica carinata HOM05D000625 ORTHO05D000467 2.1e-11 74.3 145 37.2
AUR62033850 Chenopodium quinoa HOM05D000625 ORTHO05D000467 2.1e-11 74.3 151 39.1
C06p32840 Brassica napus HOM05D002528 ORTHO05D002922 2.8e-11 73.9 145 37.2
Psat5g018880 Pisum sativum HOM05D000625 ORTHO05D000467 2.8e-11 73.9 244 36.5
unitig_37.g12964 Utricularia gibba HOM05D000625 ORTHO05D000467 3.6e-11 73.6 240 34.2
BolC6t38406H Brassica oleracea HOM05D000625 ORTHO05D000467 8.0e-11 72.4 145 36.6
Ah.11g043260 Amaranthus hybridus HOM05D000625 ORTHO05D000467 1.8e-10 71.2 162 38.3
Os03g0198300 Oryza sativa ssp. japonica HOM05D000625 ORTHO05D000467 1.8e-10 71.2 176 36.9
Gohir.D06G008800 Gossypium hirsutum HOM05D000625 ORTHO05D000467 8.8e-10 68.9 350 29.4
Gorai.010G011600 Gossypium raimondii HOM05D000625 ORTHO05D000467 8.8e-10 68.9 350 29.4
unitig_46.g17923 Utricularia gibba HOM05D001026 ORTHO05D005232 1.2e-09 68.6 178 33.7
unitig_749.g13844 Utricularia gibba HOM05D000625 ORTHO05D000467 5.7e-09 66.2 99 42.4
Gohir.A06G011400 Gossypium hirsutum HOM05D000625 ORTHO05D000467 2.8e-08 63.9 233 31.3
Zm00001eb400990 Zea mays HOM05D000625 ORTHO05D000467 2.8e-08 63.9 233 33.0
HanXRQChr09g0268551 Helianthus annuus HOM05D000625 ORTHO05D000467 1.1e-07 62.0 312 27.2
Lalb_Chr08g0245831 Lupinus albus HOM05D000625 ORTHO05D000467 1.2e-06 58.5 360 27.2
Carub.0002s2188 Capsella rubella HOM05D000625 ORTHO05D000467 4.5e-06 56.6 203 31.5
Lj1g0012117 Lotus japonicus HOM05D000625 ORTHO05D000467 4.5e-06 56.6 334 29.6
SEGI_24157 Sequoiadendron giganteum HOM05D046065 ORTHO05D000467 5.9e-06 56.2 211 31.8


User provided reference genes

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