Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35953 Davidia involucrata HOM05D004452 ORTHO05D005358 1.8e-81 305.8 147 100.0
Dinv39307 Davidia involucrata HOM05D004452 ORTHO05D005358 9.3e-67 256.9 147 81.0
vmacro21515 Vaccinium macrocarpon HOM05D004452 ORTHO05D005358 2.6e-61 238.8 147 76.2
Rhsim06G0050800 Rhododendron simsii HOM05D004452 ORTHO05D005358 3.4e-61 238.4 147 76.9
CSS0026728 Camellia sinensis var. sinensis HOM05D004452 ORTHO05D005358 7.6e-61 237.3 147 76.9
Hma1.2p1_2046F.1_g312410 Hydrangea macrophylla HOM05D004452 ORTHO05D005358 6.5e-60 234.2 145 76.6
GSVIVG01009484001 Vitis vinifera HOM05D004452 ORTHO05D005358 5.5e-59 231.1 147 73.5
TAR381G1434 Trochodendron aralioides HOM05D004452 ORTHO05D005358 1.2e-58 229.9 147 74.1
Actinidia23285 Actinidia chinensis HOM05D004452 ORTHO05D005358 7.9e-58 227.3 147 73.5
Lj4A59T44 Lonicera japonica HOM05D004452 ORTHO05D005358 2.5e-56 222.2 145 72.4
QL02p004676 Quercus lobata HOM05D004452 ORTHO05D005358 3.3e-56 221.9 145 73.1
ClCG05G019920 Citrullus lanatus HOM05D004452 ORTHO05D005358 2.4e-54 215.7 140 70.7
CsaV3_4G034360 Cucumis sativus L. HOM05D004452 ORTHO05D005358 6.9e-54 214.2 140 70.0
Nn5g30286 Nelumbo nucifera HOM05D004452 ORTHO05D005358 1.2e-53 213.4 145 66.9
Duzib093G1704 Durio zibethinus HOM05D004452 ORTHO05D005358 2.0e-53 212.6 147 68.0
Thecc.08G005800 Theobroma cacao HOM05D004452 ORTHO05D005358 4.5e-53 211.5 147 68.0
FvH4_2g34320 Fragaria vesca HOM05D004452 ORTHO05D005358 5.9e-53 211.1 147 70.1
FAN24G0195 Fragaria x ananassa HOM05D004452 ORTHO05D005358 5.9e-53 211.1 147 70.1
MELO3C016756.2 Cucumis melo HOM05D004452 ORTHO05D005358 1.3e-52 209.9 140 70.0
Cfa018088 Carpinus fangiana HOM05D004452 ORTHO05D005358 2.9e-52 208.8 147 67.3
Gorai.009G212700 Gossypium raimondii HOM05D004452 ORTHO05D005358 3.8e-52 208.4 147 68.7
CiPaw.15G055600 Carya illinoinensis HOM05D004452 ORTHO05D005358 5.0e-52 208.0 147 67.3
Gohir.D05G206300 Gossypium hirsutum HOM05D004452 ORTHO05D005358 6.5e-52 207.6 147 68.0
Cc10_g04060 Coffea canephora HOM05D004452 ORTHO05D005358 1.1e-51 206.8 147 67.3
Nitab4.5_0000287g0200 Nicotiana tabacum HOM05D004452 ORTHO05D005358 1.1e-51 206.8 147 66.0
RcHm_v2.0_Chr6g0308041 Rosa chinensis HOM05D004452 ORTHO05D005358 1.1e-51 206.8 147 68.0
FAN20G1510 Fragaria x ananassa HOM05D004452 ORTHO05D005358 1.9e-51 206.1 147 68.7
Migut.N02714 Erythranthe guttata HOM05D004452 ORTHO05D005358 2.5e-51 205.7 147 66.0
Nitab4.5_0002760g0030 Nicotiana tabacum HOM05D004452 ORTHO05D005358 2.5e-51 205.7 147 66.0
Peaxi162Scf00252g00221 Petunia axillaris HOM05D004452 ORTHO05D005358 7.2e-51 204.1 147 63.9
FAN27G2914 Fragaria x ananassa HOM05D004452 ORTHO05D005358 9.4e-51 203.8 147 68.0
Sed0009272 Sechium edule HOM05D004452 ORTHO05D005358 1.2e-50 203.4 144 65.3
FAN15G1326 Fragaria x ananassa HOM05D004452 ORTHO05D005358 1.6e-50 203.0 147 68.0
MD15G1081700 Malus domestica HOM05D004452 ORTHO05D005358 1.6e-50 203.0 149 65.8
Prupe.1G434400 Prunus persica HOM05D004452 ORTHO05D005358 1.6e-50 203.0 147 67.3
PGSC0003DMG400007967 Solanum tuberosum HOM05D004452 ORTHO05D005358 2.7e-50 202.2 147 64.6
Ciclev10000290m.g Citrus clementina HOM05D004452 ORTHO05D005358 3.6e-50 201.8 147 66.7
CAN.G1030.10 Capsicum annuum HOM05D004452 ORTHO05D005358 6.1e-50 201.1 147 64.6
Oeu043579.4 Olea europaea HOM05D004452 ORTHO05D005358 1.8e-49 199.5 145 64.8
Lalb_Chr11g0062611 Lupinus albus HOM05D004452 ORTHO05D005358 3.9e-49 198.4 135 66.7
Sopen04g032430 Solanum pennellii HOM05D004452 ORTHO05D005358 3.9e-49 198.4 147 63.9
ECA247G0253 Erigeron canadensis HOM05D004452 ORTHO05D005358 5.1e-49 198.0 143 61.5
COL.COLO4_26520 Corchorus olitorius HOM05D004452 ORTHO05D005358 6.7e-49 197.6 147 66.0
CANSAT11G1000 Cannabis sativa HOM05D004452 ORTHO05D005358 8.8e-49 197.2 147 63.3
Solyc04g078830.3 Solanum lycopersicum HOM05D004452 ORTHO05D005358 1.1e-48 196.8 147 63.3
MSTRG.24335 Avicennia marina HOM05D004452 ORTHO05D005358 1.5e-48 196.4 147 64.6
Aqoxy5G01224 Aquilegia oxysepala HOM05D004452 ORTHO05D005358 3.3e-48 195.3 145 64.1
Atru.chr13.704 Acer truncatum HOM05D004452 ORTHO05D005358 5.7e-48 194.5 147 66.0
HanXRQChr02g0039511 Helianthus annuus HOM05D004452 ORTHO05D005358 5.7e-48 194.5 145 60.0
SalBow8G0374 Salvia bowleyana HOM05D004452 ORTHO05D005358 5.7e-48 194.5 147 61.9
Manes.18G038000 Manihot esculenta HOM05D004452 ORTHO05D005358 1.3e-47 193.4 147 67.3
Sabra14G0019200 Salix brachista HOM05D004452 ORTHO05D005358 1.3e-47 193.4 146 64.4
MD08G1099500 Malus domestica HOM05D004452 ORTHO05D005358 2.8e-47 192.2 140 66.4
Phvul.009G065600 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 2.8e-47 192.2 135 67.4
SalBow8G3632 Salvia bowleyana HOM05D004452 ORTHO05D005358 2.8e-47 192.2 147 61.2
TWI36G0852 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 4.8e-47 191.4 147 62.6
TWI56G0235 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 4.8e-47 191.4 144 65.3
Hund23866 Selenicereus undatus HOM05D004452 ORTHO05D005358 1.1e-46 190.3 146 59.6
Lj1g0004160 Lotus japonicus HOM05D004452 ORTHO05D005358 1.4e-46 189.9 140 63.6
PSO210G0441 Papaver somniferum HOM05D004452 ORTHO05D005358 1.8e-46 189.5 148 63.5
Cpa.g.sc49.27 Carica papaya HOM05D004452 ORTHO05D005358 2.4e-46 189.1 145 64.1
Potri.014G028100 Populus trichocarpa HOM05D004452 ORTHO05D005358 2.4e-46 189.1 146 64.4
VMungo1309G1308 Vigna mungo HOM05D004452 ORTHO05D005358 3.1e-46 188.7 142 62.7
MBI06_g02568_MAGBIO Magnolia biondii HOM05D004452 ORTHO05D005358 4.1e-46 188.3 156 60.9
Glyma.04G039400 Glycine max HOM05D004452 ORTHO05D005358 7.0e-46 187.6 135 65.2
AUR62041892 Chenopodium quinoa HOM05D004452 ORTHO05D005358 1.2e-45 186.8 143 64.3
PSO170G2588 Papaver somniferum HOM05D004452 ORTHO05D005358 1.5e-45 186.4 148 62.2
Sc15g0006090 Simmondsia chinensis HOM05D004452 ORTHO05D005358 2.0e-45 186.0 140 64.3
arahy.Tifrunner.gnm1.ann1.UAD7VL Arachis hypogaea HOM05D004452 ORTHO05D005358 2.6e-45 185.7 133 65.4
arahy.Tifrunner.gnm1.ann1.Y5ZCTQ Arachis hypogaea HOM05D004452 ORTHO05D005358 2.6e-45 185.7 133 65.4
Glyma.06G040600 Glycine max HOM05D004452 ORTHO05D005358 1.0e-44 183.7 142 61.3
TPR.G24198 Trifolium pratense HOM05D004452 ORTHO05D005358 2.2e-44 182.6 133 64.7
THA.LOC104822853 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 2.9e-44 182.2 144 61.1
Lsat_1_v5_gn_1_21181 Lactuca sativa HOM05D004452 ORTHO05D005358 6.5e-44 181.0 150 54.0
DCAR_019448 Daucus carota HOM05D004452 ORTHO05D005358 8.5e-44 180.6 145 59.3
Eucgr.F02336 Eucalyptus grandis HOM05D004452 ORTHO05D005358 1.4e-43 179.9 136 63.2
AT5G42920 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 2.5e-43 179.1 137 60.6
BcaC06g31738 Brassica carinata HOM05D004452 ORTHO05D005358 3.2e-43 178.7 137 61.3
CARHR181170 Cardamine hirsuta HOM05D004452 ORTHO05D005358 4.2e-43 178.3 138 60.1
Sp2g07660 Schrenkiella parvula HOM05D004452 ORTHO05D005358 5.5e-43 177.9 137 59.9
SGA_v2.0_scaffold28G11777 Striga asiatica HOM05D004452 ORTHO05D005358 5.5e-43 177.9 130 65.4
ATR1126G044 Amborella trichopoda HOM05D004452 ORTHO05D005358 7.2e-43 177.6 155 55.5
A06p48170 Brassica napus HOM05D004452 ORTHO05D005358 7.2e-43 177.6 137 61.3
BraA06t27686Z Brassica rapa HOM05D004452 ORTHO05D005358 7.2e-43 177.6 137 61.3
BcaC02g10792 Brassica carinata HOM05D004452 ORTHO05D005358 9.4e-43 177.2 137 61.3
C04p25060 Brassica napus HOM05D004452 ORTHO05D005358 9.4e-43 177.2 137 61.3
BolC4t24007H Brassica oleracea HOM05D004452 ORTHO05D005358 9.4e-43 177.2 137 61.3
Aa31LG9G12980 Aethionema arabicum HOM05D004452 ORTHO05D005358 1.6e-42 176.4 144 58.3
Ca_15944_v3 Cicer arietinum L. HOM05D004452 ORTHO05D005358 1.6e-42 176.4 135 59.3
Medtr3g101790 Medicago truncatula HOM05D004452 ORTHO05D005358 1.6e-42 176.4 134 61.9
Carub.0008s0587 Capsella rubella HOM05D004452 ORTHO05D005358 3.6e-42 175.3 137 60.6
Thhalv10003147m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 1.4e-41 173.3 137 58.4
AL8G17930 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 3.0e-41 172.2 137 59.9
AUR62038817 Chenopodium quinoa HOM05D004452 ORTHO05D005358 5.2e-41 171.4 146 60.3
PGR031G1897 Punica granatum HOM05D004452 ORTHO05D005358 5.2e-41 171.4 135 60.7
EL10Ac1g01836 Beta vulgaris HOM05D004452 ORTHO05D005358 6.3e-39 164.5 141 61.7
CDE08G0013 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 4.1e-38 161.8 146 55.5
Zm00001eb255990 Zea mays HOM05D004452 ORTHO05D005358 9.4e-35 150.6 141 53.9
SEGI_02411 Sequoiadendron giganteum HOM05D004452 ORTHO05D000001 2.7e-34 149.1 150 54.0
Psat5g042600 Pisum sativum HOM05D004452 ORTHO05D005358 2.3e-33 146.0 112 62.5
SHI08268 Sapria himalayana HOM05D004452 ORTHO05D005358 1.1e-27 127.1 130 50.0
HPP92_016717 Vanilla planifolia HOM05D004452 ORTHO05D005358 1.1e-27 127.1 133 51.1
Actinidia22636 Actinidia chinensis HOM05D004452 ORTHO05D005358 5.9e-21 104.8 70 70.0
Mapoly0012s0112 Marchantia polymorpha HOM05D004452 ORTHO05D005358 8.6e-20 100.9 150 36.7
Potri.002G125300 Populus trichocarpa HOM05D004452 ORTHO05D005358 4.4e-16 88.6 95 49.5
SMO356G0003 Selaginella moellendorffii HOM05D004452 ORTHO05D005358 5.9e-13 78.2 142 35.2
Gohir.A05G203100 Gossypium hirsutum HOM05D004452 ORTHO05D005358 1.7e-12 76.6 58 65.5
unitig_749.g13678 Utricularia gibba HOM05D004452 ORTHO05D005358 4.1e-06 55.5 37 59.5


User provided reference genes

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