Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 2.3e-168 595.5 299 100.0
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.1e-134 482.6 296 81.4
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.7e-131 473.0 298 79.2
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.2e-129 466.8 285 80.7
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.3e-128 463.4 296 78.7
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 2.3e-128 462.6 304 78.6
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 2.1e-126 456.1 300 77.7
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 3.1e-125 452.2 274 81.8
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 1.4e-122 443.4 304 76.0
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.2e-121 440.3 280 77.9
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 1.6e-121 439.9 281 77.6
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.3e-120 436.8 295 74.6
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 2.3e-120 436.0 301 73.4
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 4.3e-119 431.8 297 73.7
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 7.3e-119 431.0 295 73.9
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 1.1e-117 427.2 301 71.1
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 3.1e-117 425.6 273 76.9
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.2e-116 423.7 260 78.8
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.2e-116 423.7 289 72.7
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 1.2e-116 423.7 301 70.4
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 1.2e-116 423.7 276 75.7
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 1.5e-116 423.3 296 72.6
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 2.2e-115 419.5 298 71.5
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 2.2e-115 419.5 298 71.5
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 8.4e-115 417.5 299 73.2
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 1.9e-114 416.4 303 72.6
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 2.4e-114 416.0 289 73.4
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 2.4e-114 416.0 300 72.3
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 7.1e-114 414.5 299 71.6
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 9.3e-114 414.1 305 69.8
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.6e-113 413.3 296 69.6
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 1.6e-113 413.3 298 71.1
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 2.7e-113 412.5 271 74.9
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.5e-113 412.1 296 68.9
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 3.5e-113 412.1 301 69.1
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 4.6e-113 411.8 249 81.1
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 6.0e-113 411.4 296 68.6
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 1.3e-112 410.2 303 70.3
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 2.3e-112 409.5 289 70.6
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 8.7e-112 407.5 283 75.3
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 8.7e-112 407.5 246 80.1
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 3.3e-111 405.6 305 67.2
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 5.6e-111 404.8 289 72.7
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 7.4e-111 404.4 297 70.4
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 3.1e-109 399.1 253 77.5
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 9.0e-109 397.5 291 68.4
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 7.6e-108 394.4 287 66.9
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 1.3e-107 393.7 299 67.2
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.7e-107 393.3 289 68.5
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 8.4e-107 391.0 239 75.7
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 1.1e-106 390.6 237 80.6
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 1.6e-105 386.7 302 66.6
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 2.3e-104 382.9 288 67.0
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 3.3e-103 379.0 277 68.6
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 4.3e-103 378.6 256 73.0
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 4.3e-103 378.6 256 73.0
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 4.3e-103 378.6 256 73.0
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 7.4e-103 377.9 300 66.3
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 1.6e-102 376.7 256 72.7
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 1.6e-102 376.7 256 72.7
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 2.1e-102 376.3 363 57.0
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 1.4e-101 373.6 254 72.0
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 1.8e-101 373.2 297 64.3
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 1.8e-101 373.2 296 65.9
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 6.9e-101 371.3 217 81.6
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 6.9e-101 371.3 308 62.0
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 9.0e-101 370.9 252 73.4
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 1.2e-100 370.5 306 64.1
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 4.5e-100 368.6 299 64.5
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 1.0e-99 367.5 312 63.1
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 1.3e-99 367.1 291 67.7
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 1.7e-99 366.7 304 63.5
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 1.7e-99 366.7 312 62.8
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 2.5e-98 362.8 301 62.1
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 7.1e-98 361.3 291 64.6
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 1.2e-97 360.5 293 64.8
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 2.1e-97 359.8 294 64.6
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 2.7e-97 359.4 296 64.5
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 3.5e-97 359.0 241 73.0
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.0e-96 357.5 299 63.5
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 3.9e-96 355.5 256 69.5
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 7.4e-95 351.3 303 60.7
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 4.8e-94 348.6 271 64.9
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 5.3e-93 345.1 233 72.1
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 6.9e-93 344.7 265 68.3
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.9e-93 344.7 268 66.0
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 1.0e-88 330.9 289 62.3
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 3.0e-88 329.3 298 61.1
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 1.9e-87 326.6 265 66.0
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 5.7e-87 325.1 211 71.1
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 2.2e-86 323.2 255 64.7
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 3.1e-85 319.3 299 59.9
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 9.1e-85 317.8 250 67.2
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.7e-81 306.2 264 61.4
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.1e-81 305.1 264 61.4
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 2.6e-79 299.7 183 79.2
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.0e-75 287.7 287 55.1
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.3e-75 287.3 321 50.5
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 2.2e-75 286.6 158 89.2
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 8.0e-73 278.1 282 52.5
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 2.6e-71 273.1 266 60.2
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 4.4e-71 272.3 203 68.0
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 1.0e-67 261.2 248 53.2
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 5.0e-59 232.3 173 68.8
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.1e-45 186.4 101 82.2
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 4.1e-45 186.0 130 68.5
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.0e-39 167.2 107 76.6
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 2.4e-37 160.2 232 40.1
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 7.8e-28 128.6 196 37.8
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.9e-13 80.9 56 78.6
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 3.9e-11 73.2 101 40.6


User provided reference genes

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