Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 3.7e-63 244.6 115 100.0
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 9.0e-41 170.2 110 77.3
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 7.6e-40 167.2 110 75.5
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 2.2e-39 165.6 110 76.4
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 2.9e-39 165.2 110 75.5
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 2.9e-39 165.2 110 75.5
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 2.9e-39 165.2 110 75.5
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 4.9e-39 164.5 110 72.7
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 6.4e-39 164.1 110 73.6
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 1.1e-38 163.3 110 73.6
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 1.4e-38 162.9 110 73.6
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.9e-38 162.5 90 85.6
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 2.4e-38 162.2 110 73.6
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.4e-38 162.2 109 74.3
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.4e-38 162.2 109 74.3
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 2.4e-38 162.2 110 73.6
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 3.2e-38 161.8 111 73.9
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.2e-38 161.4 111 73.9
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.2e-38 161.4 111 73.9
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 5.5e-38 161.0 110 72.7
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 7.1e-38 160.6 109 73.4
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 7.1e-38 160.6 110 71.8
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 9.3e-38 160.2 110 71.8
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 9.3e-38 160.2 110 73.6
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 1.2e-37 159.8 110 74.5
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 1.2e-37 159.8 90 85.6
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.2e-37 159.8 110 73.6
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 1.6e-37 159.5 92 79.3
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.6e-37 159.5 111 73.0
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 2.1e-37 159.1 110 70.9
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 2.1e-37 159.1 110 71.8
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 2.1e-37 159.1 110 72.7
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 2.7e-37 158.7 110 72.7
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 3.5e-37 158.3 110 70.9
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 4.6e-37 157.9 92 82.6
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 4.6e-37 157.9 110 69.1
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 4.6e-37 157.9 110 72.7
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 4.6e-37 157.9 92 78.3
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 6.0e-37 157.5 110 70.0
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 6.0e-37 157.5 110 70.0
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 7.9e-37 157.1 110 70.0
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 7.9e-37 157.1 110 70.9
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 1.0e-36 156.8 110 71.8
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 1.8e-36 156.0 111 72.1
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 3.0e-36 155.2 92 79.3
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 3.0e-36 155.2 110 71.8
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 3.9e-36 154.8 110 69.1
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 3.9e-36 154.8 110 70.9
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 5.1e-36 154.5 92 77.2
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 6.7e-36 154.1 109 65.1
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 6.7e-36 154.1 109 70.6
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 6.7e-36 154.1 110 70.0
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 8.7e-36 153.7 110 68.2
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 8.7e-36 153.7 111 70.3
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 1.1e-35 153.3 110 71.8
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 1.1e-35 153.3 110 68.2
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 1.9e-35 152.5 112 70.5
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.9e-35 152.5 110 69.1
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 1.9e-35 152.5 112 67.9
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 1.9e-35 152.5 110 66.4
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 2.5e-35 152.1 110 70.0
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 2.5e-35 152.1 106 69.8
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 3.3e-35 151.8 110 67.3
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 4.3e-35 151.4 87 79.3
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 5.6e-35 151.0 92 76.1
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 9.6e-35 150.2 89 75.3
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 1.3e-34 149.8 98 74.5
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 1.6e-34 149.4 110 70.0
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 1.6e-34 149.4 110 70.0
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 4.8e-34 147.9 110 66.4
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 8.1e-34 147.1 112 64.3
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 1.4e-33 146.4 110 65.5
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 1.8e-33 146.0 110 69.1
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 3.1e-33 145.2 110 65.5
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 2.6e-32 142.1 110 64.5
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 2.6e-32 142.1 110 64.5
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 4.5e-32 141.4 108 64.8
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 4.5e-32 141.4 146 53.4
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 5.8e-32 141.0 110 63.6
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 5.8e-32 141.0 111 64.0
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 5.8e-32 141.0 110 63.6
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 7.6e-32 140.6 110 62.7
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 1.0e-31 140.2 110 61.8
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 1.0e-31 140.2 110 61.8
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 1.0e-31 140.2 109 63.3
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 1.0e-31 140.2 109 63.3
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 1.0e-31 140.2 109 63.3
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 1.0e-31 140.2 109 63.3
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 1.0e-31 140.2 109 63.3
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.0e-31 140.2 80 82.5
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 1.0e-31 140.2 110 63.6
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 1.3e-31 139.8 109 63.3
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 1.7e-31 139.4 110 60.9
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 3.8e-31 138.3 110 60.0
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 2.5e-30 135.6 87 69.0
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 5.1e-28 127.9 85 64.7
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 6.7e-28 127.5 111 56.8
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 8.7e-28 127.1 81 75.3
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.1e-27 126.7 110 60.0
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.1e-27 126.7 89 61.8
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.5e-27 126.3 110 56.4
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 4.3e-27 124.8 82 65.9
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 2.4e-25 119.0 75 74.7
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 2.6e-24 115.5 89 53.9
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 8.4e-23 110.5 114 49.1
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 4.2e-22 108.2 114 49.1
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 2.1e-21 105.9 67 68.7
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 6.7e-20 100.9 90 52.2
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 1.6e-18 96.3 68 64.7
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 6.5e-15 84.3 136 41.9
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 2.2e-07 59.3 36 77.8


User provided reference genes

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